KEGG   Gymnodraco acuticeps: 117543485
Entry
117543485         CDS       T09661                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
gacu  Gymnodraco acuticeps
Pathway
gacu03420  Nucleotide excision repair
gacu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117543485 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117543485 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gacu04121]
    117543485 (cul4b)
   03400 DNA repair and recombination proteins [BR:gacu03400]
    117543485 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gacu04147]
    117543485 (cul4b)
Ubiquitin system [BR:gacu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     117543485 (cul4b)
DNA repair and recombination proteins [BR:gacu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      117543485 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      117543485 (cul4b)
Exosome [BR:gacu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117543485 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW PG_binding_4 DUF3678
Other DBs
NCBI-GeneID: 117543485
NCBI-ProteinID: XP_034067722
UniProt: A0A6P8UPF1
LinkDB
Position
Unknown
AA seq 863 aa
MFPTGLSSPNPPPPPTQEARPVATDVKPDSGNITSPKKRKINGSEREDTADKSLNSSSSS
SSSCSPLHIQKKLRFEDSVDIIGLDVKMAEEAAAAAAAVVAASCSNNKSKAVFLPGVGTG
HHANGLTKPAGSSGTFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVEAIQNS
TSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKSQIEQFREDALDSVLFLKKID
TCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQCKTIDGI
LLLIEMERNGEAIDRTLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREV
PDYLHHVSKRLEEEADRVITYLDQSTQKPLIASVEKQLLGEHLTTTLQKGLTHLLDENRI
QDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHVI
DICFIKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKI
MIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFK
DMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPAEMVRLQEIFKT
FYLGKHSGRKLQWQSTLGHCVLKAEYKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLA
TGIEDSELRRTLQSLACGKARVITKIPKSKDVEDGDKFSCNDDFRHKLFRIKINQIQMKE
TVEEQASTTERVYQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLKKRI
ESLIDRDYMERDKENPNQYNYVA
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
ccagtggctactgatgtcaaacccgacagcggtaacatcacatccccgaagaagaggaaa
ataaacggctctgagagggaagacactgctgacaagtccctgaattcctcctcctcttcc
tcctcctcctgctccccgctgcacatccagaagaagttgaggtttgaggattcagtggat
atcattggactggatgtgaaaatggctgaggaggctgctgctgctgcggcggccgtggtt
gctgcttcttgctccaataacaaaagcaaagccgtgttcctgcccggtgtcgggacggga
caccatgcgaacggactgacgaagcccgcaggctcctccgggaccttctccaacagtaaa
cccggggcggccaagaaactagtcatcaagaacttcaaagaaaaacccaaattgcctgag
aactacacgcaggagacctggcagaagctgaaggaggcagtggaggccatacagaacagc
acttcaatcaagtacaacctagaagagctctatcaggcagttgagaacctgtgctcccat
aagatatctgccaagctttacaaacagctgagggccgtgtgtgaagaccacatcaagtca
caaattgagcaattcagagaggatgccttggacagtgtgcttttcctaaagaaaattgac
acatgctggcaagatcactgcagacaaatgatcatgattaggagtatatttttgtttttg
gaccgtacctatgttttacaaaactcaatgctgccatctatctgggacatgggtctggag
ctgttcaggttctacatcatcagcgatctgaaggtccagtgtaaaaccatcgacgggata
ctgctgctcatagagatggagcgaaacggagaagcgatagaccgcaccttactgaggagc
ctgctgagcatgctctctgacctgcagatttatcaagactcctttgagcaacgctttttg
gaggaaactaatcgcctgtacgctgcagagggacagaggctgatgcaggagagagaggtc
ccagactatctccatcatgtcagcaagcgcctggaggaggaggctgacagagtcatcacg
tatttagatcagagcacacaaaaaccgctcattgctagtgtggagaagcagttgctgggc
gaacatctcacgactactctgcaaaaaggtctgactcacctgctggatgagaacagaatt
caggatctgtctcttctctatcaactcttcagtcgagtgcgaggtggcgttcaggtcctc
ctgcagcactggatagaatacataaaggcttttggaagcacaatcgtaatcaatccagaa
aaagacaaaacaatggtgcaagagttgctggactttaaggacaaggtggatcacgtcatt
gacatctgcttcataaagaacgagaagtttgtcaacgccatgaaggaggctttcgagaca
ttcatcaacaaacggccaaataaacctgcagagctcatagcaaaacacgtggattcaaag
ttaagggcaggaaacaaagaagcaacagacgaagaactggagaagatgctggataaaata
atgattatttttagattcatctatggaaaggatgtttttgaagccttttacaaaaaggat
cttgccaaaaggttgctggttggaaaaagcgcctctgtggatgctgaaaaatctatgttg
tcgaagctgaaacatgaatgtggagcagcgttcaccagcaaactggagggcatgttcaag
gatatggagctttctaaagacatcatggtgcagttcaaacagtacatgcagtgccaaaac
attccaggcaacattgagctgacggtgaacatcctcacgatgggttactggccaacctat
gtccccatggaagtgcacctgcctgctgagatggtgcgactacaggagatcttcaagact
ttctacctgggcaaacacagcggcaggaagctgcagtggcaatctacactcggccattgt
gtcttaaaagctgaatataaagagggcaagaaggagctgcaggtgtccctcttccaaacg
cttgtgctgctgatgttcaacgaaggagaggagttcacactggaggagatcaaactggca
accggaatagaggacagtgaactgcgccggactctgcagtcacttgcttgtgggaaggca
cgtgtcatcaccaaaatcccaaaaagcaaagatgtggaggatggggacaagttttcttgc
aatgatgacttcagacacaagctcttcaggatcaaaataaatcagatccagatgaaagaa
acggtggaggagcaagccagtaccacagaaagggtctatcaggatcgtcagtatcagatt
gatgctgccatcgtgcggatcatgaagatgaggaagactctgagccataatctcttgatg
tctgaagtgtacaaccagctcaagttccctgtcaagcctgctgacttgaagaagaggata
gagtctcttattgacagggactatatggagcgtgacaaggagaaccccaaccagtacaac
tatgtggcttag

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