Gymnodraco acuticeps: 117543725
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Entry
117543725 CDS
T09661
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a
KO
K14966
host cell factor 1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03083
Polycomb repressive complex
gacu04980
Cobalamin transport and metabolism
gacu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117543725 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
117543725 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117543725 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gacu01009
]
117543725 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gacu03036
]
117543725 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
gacu03029
]
117543725 (hcfc1a)
Protein phosphatases and associated proteins [BR:
gacu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117543725 (hcfc1a)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
117543725 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
117543725 (hcfc1a)
MLL-HCF complex
117543725 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117543725 (hcfc1a)
Mitochondrial biogenesis [BR:
gacu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117543725 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
117543725
NCBI-ProteinID:
XP_034068111
UniProt:
A0A6P8TUV9
LinkDB
All DBs
Position
Unknown
AA seq
1710 aa
AA seq
DB search
MSAPGSTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNT
ATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKKLK
AKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSV
VGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDTLTWNK
PSVNGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSN
CWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETERP
HAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPATASAAMISSPVQPLNSP
KGPALAVAAPSAQNLPQTAILKVAAQQSGTGTSIVTVRPSQPGKSPVTLTSLPPGVRMVM
PAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSGGTLLNVPAGATILKTVAMSPGTTT
MKMASPLMVSNPATRMLKTAAAQVGTATGSSPTNTRPIITVHKSGAVTVAQQAQVVTTVV
GGVTKTITLVKSPLTMGGSGTLISNLGKMMSVVQTKPVQTSITGQASNNPLTQLLQSKGP
LPAGTILKLVTSADGKPTTIITTSQAGGTGHKPTILNISGVSPNTTKQGTTIIKTIPMSA
IMSQSGAAGLNSRVTSSGGMKTPITILTTKVMSTGTPSKFITTVPKLTTAGQQGLTQVVL
KGAHGQPGTILRTVPMSTVGGVRLVTPVTMSSVKPNVTTLVVNRTTGVTTFGTVTGTVSS
SLAGAAADSSNASLVTPITTLGTIATLSSQVISPASITVSAAQTSMTSATTLSSSTMTVQ
NQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSSEAGASGDGSGTVCSNPPCETH
ETGTTNTATTASAAMGAGQVCSNPPCETHETGTTNTATTASSNMSTPRMCSNPPCETHET
GTTNTATTASSSMGGVQKVCSNPPCETHVTGTTNTSTQSSSNMSTGQTSSSAQRVCSNPP
CETHVTGTTNTSTQSSSNMSTGQTSSSAQRVCSNPPCETHETGTTNTPSTATSSLGGDQS
SAEGGPVQRVCSNPPCETHETGTTNTATTATCTMETGEGQQTEEGAESTTSTEVDPTTAA
TSTVTTTTTTTQGRAITTVTQSTPAPGPSVPSISSISAGSPEEPMQTDETASAEAAPAGE
GASAMETQAEGEAAAATALNLPSELMAEAQGATLMVTGLSDEELAVTAAAEAAAQAAATE
EAQALAIQAVLQAAQQAVMNEASGESQQPTTIPIMLTQQELAALVLQQQQLQQLQLQEAQ
AVAQQASAEANLPTEGLAPADSLNDPSVESNGHNEMAAAVTSAVASLLPRTTAETLAPSS
TFAPSLSVASPAKLQAAAALADVANGIEGSKQAPQPTPVKAVVKKDNQWFDVGIVKVTNM
VVTHFYMPGDDSQGDDDSGNMPDYSQMKKMELQPGTAYKFRVAGINACGRGSFSEISAFK
TCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTAEAKASTPAQ
LAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESGK
DAASAKPAPKRPGTSPDTKAAGPKKARTDQ
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggctccacggcgtcggttctgcagccgcggtggaagcgggtcctcgga
tggtccggtcccgttccccggcccaggcatggacacagagctgtggccataaaggagctt
atggttgtcttcggtggtggaaacgaaggaatagtggatgaattgcatgtttacaacact
gcaacaaaccagtggtttatcccagcggtccgtggtgatattccccccggctgtgctgca
tatggttttgtatgtgatggcacacgattgctggtgtttggtggaatggtggagtatgga
aagtacagcaacgatctctatgaacttcaggccagcagatgggaatggaaaaagttgaaa
gcgaaaaacccaaagaatggcccccctccttgtcctcgtctgggccacagtttttccctg
gttggcaataaatgctacctgtttggtggacttgccaatgacagcgaggacccaaaaaac
aacattcccagatacctaaatgatctgtacacacttgagctgcgtgcgggatccagtgtg
gttggatgggatattccgatcacatacggagtcctgcctcctccgcgtgagagccacact
gctgtggtctacacagaaaagacgagcaggaaatctcgcctgataatctacggaggcatg
agtggttgccgccttggagatctgtggacacttgatatcgataccctgacatggaacaaa
ccatcagtaaacgggacagcaccgctacccagaagtcttcactctgccaccaccatcaca
aacaagatgtatgtttttggaggatgggttccattggtaatggatgacgttaaagtggcc
acacacgagaaggagtggaagtgcacaaacactctcgcctgcctaaatctagactccaat
tgttgggagaccgtgttgatggatactcttgaagacaacatccctagggcccgtgccggc
cactgtgccgtggccatcaattcccgactctacgtctggagtggccgcgacggttatcgc
aaagcttggaacaaccaagtctgttgtaaagacctctggtacctggaaaccgagcggcca
catgctcctgcccgggtgcagctagtccgtgccaacacaaactctctcgaggtcagctgg
ggcgccgtctcaaccgctgacacctacttactgcagctgcagaagtacgacatcccagca
actccagctactgcctctgcagctatgatttccagccccgtgcagcctctgaactctccg
aagggccccgcactggctgttgcagctccttctgctcagaatctcccccagacagccatc
ttgaaggttgcggctcaacagtctggcactggcacatctattgtcacagtccgccccagc
cagcccgggaaatcccccgtcactctgacatccctcccgccgggtgtaaggatggtcatg
cctgcccagaccacccaaggatcgccaattggaagtagccctcagatgagtggcatggca
gctttagctgctgcagctgcagcaacacagaagatcccgccctctggtggcactctcctc
aatgttcctgccggagccaccattctcaaaactgtagccatgtcccctggcacaaccaca
atgaaaatggcatctccactcatggtcagtaacccagccacccggatgctgaagaccgct
gcagcccaggtgggaacagctactggttcctctcccaccaacaccagacccatcatcact
gtgcataagtctggagcagtcactgtggcccagcaagcccaggtggttactacagtggtg
ggaggagttaccaagaccatcaccctggtcaaaagtcccctcaccatgggcggcagtggc
actctgatctccaaccttggcaagatgatgtctgtggtacaaaccaagccagtgcagaca
tctatcacaggccaggcttccaataaccctctcacacagctcctacagtcaaagggtccc
ctcccagccggcaccatccttaagctggtgacctccgcagatggtaagcccacaaccatc
atcacgacctcccaggcaggaggcactggacacaagcccacgatcctcaacatcagtggg
gtctctcctaacaccactaagcagggcaccaccatcattaagaccatccccatgtctgca
atcatgagccagtctggagctgcaggtctaaactcacgtgtgacaagcagtggaggcatg
aagacgccaatcaccatcctcaccaccaaagtgatgagtacaggaactcccagtaaattc
atcactacagtgcccaaactcaccactgccggacaacagggactcacacaggtcgtcctg
aagggtgctcatggacaacctggcactatcctgcgcactgtgcctatgagcacagtcggt
ggtgttcgacttgtgacaccagtgaccatgtcttctgttaagcccaatgtgaccactctg
gttgtcaataggacgacaggtgtcaccacttttgggacagtcaccggtaccgtctcctcc
agcctggcaggagccgctgcagacagctccaacgcctctctggttacccccatcaccaca
ctgggaaccatcgccaccctgtccagccaggtcatcagcccggcgtccataactgtgtca
gccgctcagaccagcatgacctccgccaccaccctctcttcctccaccatgacggtgcag
aaccagcccacccaggtgactctgatcacaactcccagcggtgttgaagctcagccagtg
caggacctaccagtgtccatcctggcttcacccacctccgagcagcccagctcctctgaa
gccggagcgtctggcgatggctctggcactgtgtgctccaacccgccctgcgagacccat
gagaccggcaccaccaacacggccaccaccgcctctgctgcgatgggagcaggacaagtg
tgctccaacccaccctgcgagacgcacgaaacgggcacaacaaatacagccacaacggct
tcatcaaacatgtcgacgccacgcatgtgctccaacccgccgtgcgagacccacgaaacc
gggacgaccaacacggccaccacagcgtccagcagcatggggggagtccagaaggtttgc
tccaacccgccctgcgagacccacgtgacgggtaccaccaacacatccacccagtcgtcc
tccaacatgagcacgggccagacgagctccagcgcgcagagggtgtgctccaacccgccc
tgcgagacccacgtgacgggtaccaccaacacatccacccagtcgtcctccaacatgagc
acgggccagacgagctccagcgcgcagagggtgtgctccaacccgccttgcgaaacacac
gagaccgggaccaccaacaccccgtctacagccacctccagcctgggcggagaccagagc
agcgcagaaggaggcccggtccagagagtgtgctccaacccgccctgcgaaacacacgag
accggcaccaccaacacagccaccacagccacctgcaccatggagacaggcgaaggccag
cagacggaggagggagcagaaagtaccaccagcacagaagtggaccccaccactgcagca
acaagcactgtcaccaccaccaccaccaccacccagggcagggccatcactactgtcact
cagtccacacccgctcccggaccctctgtaccctcgatctcatccatctcagccggctcc
ccagaggagcccatgcagacggatgagaccgcatcagcagaagctgcacctgctggagaa
ggagcgtctgctatggagacacaagccgagggtgaagcagccgcagctacagccttgaat
ctgccctcggagctgatggccgaggctcagggtgccacactgatggtgacggggctgtcg
gacgaggagctggctgtgactgcagcagcagaagccgctgctcaggcagctgcgactgaa
gaagcccaggcgctcgccatccaggccgtcctccaggcagcacagcaagccgtaatgaat
gaggcctctggagagagccagcagcccaccaccatccccatcatgttgacccagcaggag
ctggcggcgctggtcctgcagcagcagcagctgcagcagctgcagctgcaggaggctcaa
gccgtggcgcagcaggccagcgcggaggccaacctgcccactgagggcctggcccccgca
gacagcctcaacgacccctccgtcgagagcaacggacacaatgagatggcagccgcagtc
accagcgctgtggcctcactgctgccacgcaccactgccgagacactcgctccttcgagc
acatttgctccatctttatcggtggcaagtccagccaagctgcaagcagcagccgccctg
gcagatgtggccaatgggatcgagggatcgaaacaagccccacagccaaccccggtgaag
gctgttgtaaagaaagacaaccagtggttcgatgttggaatcgttaaagtgacaaatatg
gtcgtcacccacttctatatgccaggagatgactctcagggagatgatgactctggcaac
atgccagactacagccaaatgaagaaaatggagctgcagcctggcacagcttacaagttt
cgtgttgctggaatcaacgcttgtggccgtggatctttctcagagatatccgctttcaag
acctgcctaccaggcttcccaggggctccttgcgccatcaaaatcagcaagagccccgat
ggtgcccacctgacctgggagccgccctcggtgacgtcggggaagatcatcgagtactct
gtgtacctggccatccagagcaaccagacagccgaagccaaggcctccaccccagcgcag
ctagccttcatgcgcgtgtactgcgggcccaacccctcctgcttggtgcagtcgtccagc
ctctccaacgcccacatcgactacaccaccaagcccgctatcatcttccgcatcgccgcc
cgtaacgagaagggctacggccccgccacccaagtccgatggctgcaagaatccggcaaa
gacgccgcctctgcaaaaccggccccaaaaagaccaggcacctctcctgatactaaggct
gccggtccaaagaaagcgaggacggaccagtga
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