Gymnodraco acuticeps: 117544129
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Entry
117544129 CDS
T09661
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117544129 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gacu03400
]
117544129 (msh2)
DNA repair and recombination proteins [BR:
gacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
117544129 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
117544129
NCBI-ProteinID:
XP_034068846
UniProt:
A0A6P8TWX2
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MAVQPKHNLSMDSAAESGFLSFIFSMPEKPDTTFRIFDRNDFYTVHGKDAVFAAKEVFKT
NGVIKYLGSGSRKLESVCLSKMNFEAFVRDLLLVRQYRVEVYKNHSKSSKDWKLEYKASP
GNLTQFEEILFGGGTGAVGSAGIVAVRVATGADGQRVVGVGYLDAAQRMMGVCEFPDNEI
FSNLESLLVQVGPKECLLAQGDGNTDGSKLREVVERGGVLVSERKRAEFSSKDTVQDLNR
LLRAKKGESVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTSLDLGQYMRLD
NAAVRALNLFQGAPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLDMV
ESFVCDSELRQTCQEDLLRRFPDLHRLSKKFQRHSATLQDCYRVYQAVSHLPTLVSALER
YSGSYEVLLEAVFLSPLRDLNSDFVKYQEMIETTLDMNQIDHHEFLVKASFDPVLSELRE
KMDELEESMKAVLNSAARELGLDAGKTVKLESNAMLGFYLRVTCKEEKTLRNNKKFSTLD
VQKNGVRFTNGKLSSLNEEYTKNREEYEGAQDAIVKEIINIASGYVDPLQAMSDVIAQLD
AVVSFAVASVSAPVPFVRPRLLADGCRRMELTQARHPCMETDADTAFIPNDITFTQGEKN
FYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSVLARVGAGDSQVKGVS
TFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKISCFCLFATH
FHELTALAAQQSTVHNLHVTALTSHNTLTMLYRIKHGVCDQSFGIHVAELACFPPSVVAM
AKEKAEELEEFQEPAGGKQEKGPEAKRRRMDKQDGETLIQEFLEKAKSLPAATMSEEEVK
TALRKMKQELLSKNNTYITEILSRCVPAKSLI
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaaccgaaacacaacctgtctatggacagtgcagccgaaagtggctttcta
agctttattttctccatgccggagaaaccggacacaactttcagaatatttgaccgtaat
gacttctacactgtccacggaaaagatgcagtattcgcggccaaggaagttttcaagacg
aatggggtcatcaaatatttgggctcagggagtcgcaagttggaaagtgtctgcctgagc
aagatgaacttcgaggcctttgtgagagacttgctgctggtgaggcagtacagagtggaa
gtttacaaaaaccacagcaagagcagcaaagactggaagcttgagtacaaggcctctcca
ggaaacttgactcagtttgaagagattctgttcggcgggggaaccggagcagtggggagt
gcaggaattgtagccgtgcgtgttgctacaggagctgacggacagcgcgtggtcggggtt
ggctatttggacgctgcccaaaggatgatgggagtgtgtgagtttcctgacaacgagatc
ttctccaacctggagtctcttctcgtccaggtcggccccaaagagtgtctcttggcccag
ggcgatggcaacactgacggcagtaaactacgggaggtggtggagcgaggcggcgtgctg
gtctctgagaggaagagagcggagttcagcagcaaagacacggtccaggatctgaaccgg
ctgctgagggccaagaagggagagagtgtggcgagcaacacgctgcctgagctggacaaa
caggtggccatgtcgtgcttggctgcagtggtgcgtttccttgagctgctctctgacgag
tccaactttaactccttcagtctgacctctctggacctgggtcagtacatgaggctggac
aacgctgccgtcagggctctcaacctcttccagggagcccccgatgacacaagtggagct
cattcattggccggtctgttgaacaagtgccgcacgccgcagggtcagcggctggtcaac
cagtggatcaaacagcctctcatggacaaaaccaaaatagaggagaggctggacatggtg
gagagctttgtgtgtgactctgagctcaggcagacctgtcaggaggatctgttgcggcgt
tttccggaccttcaccgtctgtccaagaagttccagcgtcactctgcgactcttcaggac
tgctaccgcgtctaccaggctgtgagccacctcccgacactcgtcagcgccctggagaga
tactcaggtagctacgaggttctgttggaggcggtgttcctctctcctctcagagatctg
aactctgactttgttaaataccaggagatgattgaaaccacgctggacatgaaccagatt
gaccaccacgagttcctggtgaaggcgtcattcgaccccgtgttgagcgagctgagagaa
aagatggacgagctggaggagagcatgaaggcggtgctgaacagtgcagccagagaacta
ggtctggacgctggtaagacggtgaagctggagtctaacgccatgctgggcttctacctg
agagtcacctgcaaggaggagaagactctgaggaacaacaagaagttcagcacgctggac
gtccagaagaacggagtgcgcttcacaaacgggaagctgagctctctgaacgaggagtac
actaagaaccgtgaggagtacgagggggcccaggacgccattgtcaaagagatcatcaac
atcgcctcaggctacgtggatcctctccaggcgatgagcgacgtgatagcgcagctggat
gccgtggtgagtttcgccgtggcgtccgtctccgctcctgtgccgttcgtgcggcctcgc
ctgctggcggacggctgcaggcggatggagctgacgcaggccagacatccctgcatggag
actgacgctgacaccgccttcatccccaacgacatcaccttcacccagggagagaagaac
ttctacatcattacaggaccaaatatgggcggtaaatcgacgttcatccgtcaggtggga
gtgatcgctctgatggcgcagatcggctgctttgtgccgtgtgaaaaggcggagcttagt
gtgattgacagcgtcctggccagggtgggagcgggagacagccaggtcaaaggagtgtcc
acttttatgtctgagatgctggagacggctgccatcctgcgctcggcaacagagaactct
ctcatcataatcgacgagctcggaagaggcacgtccacgtacgacggctttggtctggcc
tgggccataagtgaacacatcgcctccaaaatcagctgcttctgtctgttcgccactcac
ttccacgagctgacggccctggcagcgcagcagtccaccgtccacaacctgcacgtcacc
gctctgacctcacacaacactctcaccatgctgtacaggatcaaacacggtgtgtgcgac
cagagtttcggtatccatgtggccgagttggcttgcttcccgccatcggtggtggccatg
gcgaaggaaaaggcggaggagctggaggagttccaggaaccagcgggggggaagcaggag
aaggggcccgaggccaagagacgacgcatggacaaacaagacggggaaaccctgatccag
gagttcctggagaaggccaagtccctccctgctgccaccatgagtgaagaagaggtgaag
acagcgctgaggaagatgaagcaggagctcctctccaaaaacaacacatacatcacagag
atcctttcacgctgtgttcctgcaaaaagtttgatttaa
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