Gymnodraco acuticeps: 117544259
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Entry
117544259 CDS
T09661
Symbol
zgc:172302
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu02010
ABC transporters
gacu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117544259 (zgc:172302)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117544259 (zgc:172302)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gacu02000
]
117544259 (zgc:172302)
Transporters [BR:
gacu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117544259 (zgc:172302)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
117544259
NCBI-ProteinID:
XP_034069047
UniProt:
A0A6P8UU87
LinkDB
All DBs
Position
Unknown
AA seq
2445 aa
AA seq
DB search
MGAELSFSYSCRLKTLGKWRVNDKLHRPSLTLKGDFITCYNSKGLHHDQVADKQLKAMWF
FQKLGLLLWKNITYRRRNKIQLIIELLWPLFLFVILIAVRHSHPPYKQSQCHFPNKALPS
AGTLPWIQGIICNINNPCFHSLTPGETVGQVGNFDNSILSRLFVDAQTVLSYSGNQRFPG
FQDLMGSVQRLGERPGAWPNIPVEEYLRANETFSSFLLTNGSLSSVTVSQLLKARLNFQV
VLAGSELQLQDLVCNASMLGRFLTVEGGDAAMNDLQTQLCNVSADVLKEAERIFLSQLDL
PKLLTRERLMANAEDLRDISLAVMSVSQEMAFLIDDFSSLSSFADMSAALSLLSPANRSA
LPRESFRAFSRIMCGHPEIGGERIPSLNWYEDNDIKSFLGKNGTEDKDLDHDNNTTPFCK
SLIHGLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVQEVMKEVNKPFEDLQILQELNEAW
MEVGPRVKYYMENSLEIQLLQDLLKRPEVAVLVNLRLENTTWTATRIARFLSTPPPGTPK
RPGAPPNWLDIYNNLGHTISTLSQVSECFSLNKLEGLDTEGQMVDRALELLEGRQFWAGV
VFLLPNSSSPNLPPHVKYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGFVYV
QDLVERAVSRILTGVQQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMII
KGVVYEKEARLKETMRIMGLGTGTLWLSWFISSIVPFLVSAGLLIAMLKVGDILPYSNPL
VVFFFLTAFATATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDRLNTTYK
VIASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLRSSPVQGDSYSFTTSIVMLYVDAFIYA
TAAWYIEAVFPGEYGIPRPWYFIFQLNYWGGIPLEAGMPIPPAPGEQNRDHIEPEPDNLV
MGVSVRNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPTSGT
VYINGMDIRHDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGCLKGLSEAEVKAEMDTLL
EDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDLLLK
YRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCYGSPLFLKSRLGSGYYLTVVKREGLE
TSTPSSTSICTSNSTSNSTSTSKLPPLKDSESSMSEDTGLGSEESNSYLAALLSLAQQHI
PGARLVEESGREAVLNLPQAAAKDSSLAVFLAELDQRLSELGVSSYGLSDSTLEEIFLRV
AEETGVDADPELQAESPSRQQPSAGQRVERQDAEEPETGRKRLRKQEPQETDLLSGDGRG
GVPLTGWWLTWQQLRALFIKRWLYARRSRRGFFAQIVLPAVFVLIALLFSLIVPPFGKYP
SLQLQPWMYGEQFTFFSNDAPGNPAMENLLEALLDQPGFGTKCMEREDNSTIPVCEDERK
GLFMRPQFSYTTWEMFSRGNWSRHKPSPDCQCSTEDVRRMLPDCPTGAGGLLPPQKKRLT
GDTLQNLTSYNISDYLVKTYSQILKKSIKTKKWVNEFRYGGFSLGGSSTQTLSQVHHVQD
SVTAIRTQYRVPQNSSLDHLLNRLPDFLAGLNSQNNVKVWYNNKGWHSMVSFVNVMNNGL
LRASLDPGPERRKYGITAYNHPLNLTKEQLTEMAMMTTSVDVLVSICVIFAMSFVPASFV
LFLIEERVSKAKHLQFVSGVKPILYWLANFSWDMLNYTVPASMVVLIFICFQQQSYVSET
NLPALILLLLLYGWSITPLMYPASFLFSVPSTAYVVLTSINLFIGINGSIATFVLELFVD
EHLNEVNRILKKVFLIFPHFCLGRGLIDMAKNQAMSDAFQRLGTKQTLDPLQWDFVGKNL
FAMAVEGLIFFIFTILLQYKFFINFRPWWSEPEVPPLGPEDEDVARERERVISGKAQSDI
LTMVDLSKVYKAGKMPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTSITYGEAF
LNQHSVTTEMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVSEESVAKVAQWGVTK
LGLAQYSEREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCIVSVT
KEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIVLRLMDNISE
PASCPISSFMQSSFPSIELKERHQSVLQFQLPSHACCLARVFEVLANNHEELGIIDFSVS
QTTLDQVFVNFAKEQTDDDVLTDVIISNSTVQTKLTTLVNRVNPPTILPLPPITPPQPSK
SPQQPAKSSGSKPKEGKSKKPKSGMVKSKEGKANGEKSSSMAMTQIPQKEEKAQRTSRRA
SGGSDSSSGGAQGESSQSSKRKAESSSQNPSALFIVDGKTQDSVL
NT seq
7338 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggaactttctttcagctactcttgccgtttaaaaacattggggaaatggaga
gtcaatgacaagctacaccggccgtccttaacactgaagggagattttatcacctgttat
aacagcaaaggtttgcatcatgaccaggtagcagacaaacagttgaaagcgatgtggttt
ttccaaaagcttggcctcctgctctggaagaacatcacataccgcaggaggaacaagatc
cagctgatcattgagctcctctggccgctcttcctcttcgtcatcctcatcgctgttcgc
cattcacaccctccctacaaacagagccaatgtcattttccaaacaaagccttgccgtcg
gcaggcaccttgccctggatccagggcattatctgcaacatcaacaacccctgcttccac
agcctgaccccgggggagacagtgggacaagttggcaactttgacaactccatactgtct
cgtctctttgtggacgcccagacggttctgtcctacagtggaaaccagagattccccggc
tttcaggacctgatgggcagtgtccaaaggctgggagagagacctggagcctggccaaat
attccggtagaagaatacctgagagccaatgagactttctcctccttcctcctgaccaat
ggcagcctgtcgtctgtgactgtgagccagttgctgaaagctcgcctcaattttcaggtt
gttttggctggatctgagttgcagctgcaggacttggtgtgtaatgcgagcatgctggga
cgttttctgacggtggaaggaggagacgcagccatgaacgatcttcagactcagctgtgt
aacgtgtcagctgacgtcctgaaggaggctgaacgcatcttcctctctcagctcgatttg
cccaagctgttaacgagagagcgtctgatggctaacgccgaagacctcagggacatcagt
ctggccgtcatgtccgtttcccaggagatggccttcctcatcgatgatttctcctctctc
tccagctttgctgacatgagtgcagctctcagtcttctatctccagcgaatcgctcggcg
ttgcccagggagagttttcgtgctttttcaaggatcatgtgcggtcacccagagattggt
ggtgagcgaatcccttcactcaactggtatgaggacaatgacatcaagtccttcttagga
aaaaatggcaccgaagacaaagacctggaccatgacaacaacacaactccattctgtaaa
agtttgatccacggcctggagtccaaccctctgtctcgcattgtgtggcgagggataaaa
cctctgtttattggaaaactgctgtacacaccagacactcctgcagttcaggaagtcatg
aaagaggtaaacaagccctttgaagacctgcagatcctccaggagctgaatgaagcctgg
atggaagtggggccgcgagtcaagtattacatggagaacagtttggagattcaactactg
caggatttgttgaagcgtccagaggtcgcagtactggtcaacctgagactagagaacacg
acctggacggccactaggatcgctcgtttcctgtccacgccccccccaggcaccccgaag
agacccggagcgcctcctaactggctggacatctacaacaacctcggccacaccatctcc
accctctcacaagtctctgagtgtttctctctgaacaagctggaggggttggacactgaa
ggtcagatggtggacagggcgttggagcttcttgagggccggcagttttgggcaggtgtt
gttttcctgcttcctaactcctcatcccctaacctgccgccccacgtgaaatacaaaatc
cgaatggacattgatgatgtgacccggaccaacaagatcaaggacaggttttgggaccct
ggtccagcagccgacccttttaatgatatgcgctacatttggggtggctttgtgtacgtc
caggacctggtggagagagcggtgagccgcatcctgaccggagttcaacaaacaaccggc
atctacatccagcagatgccctacccctgctatgtggatgatgttttccttcgagtgctg
aaccgctctctgccactcttcatgacgctggcctggatctactcggtggcgatgatcatc
aaaggcgtagtgtacgagaaggaggcgaggctgaaggaaaccatgaggattatgggtctg
ggaacgggaacgctgtggctcagctggttcatcagcagcattgttcctttcctggtctct
gcagggctcctcatcgctatgctaaaggtgggggacatcctgccgtacagcaacccactt
gttgtgtttttcttcctgacggcgtttgccaccgccaccatcatgcagtgtttcctcatc
agtaccttcttctctaaagccaacctggctgctgcctgtggagggctgatctacttcggg
ctgtacctgccgtacgtactgtgtgtagcctggagagaccgcctcaacaccacctacaaa
gtcatcgctagctttctgtcccctgtggcctttggcttcggctgtgagtatttctctcag
tatgaagagcagggcgtaggcatccagtggtacaacctccgctccagccctgtgcaagga
gactcgtacagcttcaccacctctatagtcatgctctatgtggacgccttcatctacgcc
actgcagcctggtacatcgaagcagtgtttcccggagaatatgggatccccaggccctgg
tacttcatcttccaactcaactattggggaggaattcctctggaggcaggcatgcccatc
ccccccgcacctggagaacagaatagagatcacattgaaccagagcccgataacctggtc
atgggtgtgagcgtcagaaacctggtgaaaatctacaagaaaggagccaaactggccgtc
aatcacctgaacctgaagttctacgaggggcagatcacttccttcctcggacataacgga
gcaggcaaaaccaccaccatatcggtcctgactggcctgttcccacccacctcgggcact
gtctacattaatggaatggacatccgccatgacatggacatcatccggaggacactggga
gtttgtccacagcacaatgtcctgttcgacatactaacagtggaggagcatgtttggttt
tatgggtgtctgaagggtttatctgaagcagaggtgaaagctgagatggacactctgctg
gaagacgtcggcctgctgcacaaacgacatgaacagaccaaaaacctctctggtggcatg
cagaggaagctgtctgtggcgatcgcgtttgtcggaggctcgaaggtggttgttctggat
gagcccacagcaggggttgatccttactcccgcagagggatctgggatttgctgctcaaa
tatagaaaagaccggaccatcatcctgtccactcactacatggatgaggcagagctgcta
ggcgatcggatcgccatcatctctcaggggaagctgtgctgctatggctcaccactcttc
ctgaagtcccgccttggatctggctactacctcactgtggtgaagagggagggactggaa
accagcactcccagcagcaccagtatctgcaccagcaacagcaccagcaacagcaccagc
accagcaagctgcctcctctcaaggacagtgaatcatccatgagtgaagacaccggcctg
ggaagtgaggagagcaactcatacctggcggcgctgctctccctggcgcagcaacacatc
cccggggcgaggctggtggaggagtcggggcgcgaggcggtgctcaacctgccgcaggcg
gctgccaaggacagcagcctggccgtcttcctggccgaactggaccagaggctgagcgag
ctgggcgtcagcagctacggcctgtcggacagcactctggaggagatctttttacgagtg
gctgaggaaacgggggtcgatgctgacccagagctgcaggctgagtctcccagcaggcag
cagccgtcagccgggcaacgggtggagaggcaagatgctgaagagccagaaacaggaagg
aaaaggcttcgtaagcaagaacctcaagagacggacctgctgagtggagatggccgaggg
ggggtcccgctgacgggctggtggctgacctggcagcagctcagggctctcttcattaaa
cgctggctttacgctcgaaggagccgcaggggcttctttgctcagattgtgctgccggct
gtattcgtgctgatcgccctgctgttcagcctcatcgttcctccctttgggaagtatccc
tccctgcagctgcagccctggatgtacggggaacagttcaccttcttcagcaatgatgca
cctgggaacccggccatggagaacctactggaagctctgctggaccagccaggttttggt
accaaatgcatggagagagaggacaacagcacgattcctgtgtgtgaagacgagcggaag
ggcctgttcatgcggccgcagttctcttataccacctgggagatgttcagcagaggcaac
tggagcagacacaaaccgtctcctgactgtcagtgtagcacagaggacgtccggcggatg
ctccccgactgcccgacgggggccgggggtctgctgcctccacagaaaaagaggctgact
ggagacaccctccaaaatctgacaagttataacatctctgattacctggttaaaacctac
tctcagatcctcaagaaaagcataaaaaccaagaagtgggtaaatgaattcagatacggg
ggtttctccctggggggcagctccactcagaccttatctcaggtgcatcatgtccaagac
tccgtcacggccatcaggactcaatatcgtgttccgcagaacagttcactggatcatttg
ctaaacagactgccagattttctagcaggactgaacagtcaaaacaatgtcaaggtgtgg
tacaataacaagggatggcattcaatggtttcatttgtcaacgtgatgaacaacggcctg
ctgagagcgagtctggaccccggtccagagaggaggaaatacggcatcactgcctacaac
cacccactcaacctcaccaaagaacaactcacagaaatggctatgatgaccacatcagtg
gacgttctagtttccatctgcgtgatctttgccatgtcctttgtgccggccagcttcgtc
cttttcctgattgaagagcgagtcagcaaagccaaacaccttcagtttgtcagcggagtc
aaaccgatcctctactggctggccaacttcagctgggacatgttgaactacaccgtcccg
gccagcatggtggtgctgatcttcatctgcttccagcagcagtcgtacgtctctgagacc
aacctgccggctctcatcctgctgctcctgctctacgggtggtccatcacccctctgatg
tacccagcatcctttctgttctccgtgcccagcacagcctacgtggtcctgacctccatc
aacctctttatcggaatcaacggcagcatcgccaccttcgtcctggagctgtttgttgac
gagcatctgaacgaggtgaacaggatcctgaagaaggtgtttcttatcttccctcatttc
tgcctgggacgaggactcattgacatggccaaaaaccaagccatgtccgacgccttccag
agactgggcacaaagcagactctggaccctcttcagtgggactttgtagggaagaacctc
tttgccatggcagttgagggtcttatcttcttcatcttcaccatactgctgcagtataag
ttcttcattaatttcaggccgtggtggtccgagcctgaggtgcctcctcttggtccggag
gacgaagacgtggccagggagagagagagggtgataagtggcaaagcccagtcagacatc
ctaaccatggtagacctgagcaaggtttataaagcaggcaagatgccggcagtcgatcgt
ctctgcctcgggattcctcgtggagagtgttttggcctgctgggggtgaacggcgcagga
aagacctccacctttcgcatgctgaccggagacacaagcatcacctacggagaggctttc
ctgaatcaacacagtgtgacaacagagatggagcgagtgcaccagctgatgggttactgt
ccgcagtttgatgccatcagcgacctgctgacgggtcgggaacatctggagctgtacgcc
cgcctgcggggagtgtcagaggagtctgtcgccaaggtggcgcagtggggcgtgacgaag
ctgggactggcccagtactctgagcgggaggcgggaggatacagcggaggcaacaagaga
aagctctctaccgccatctccctcatcggagctccgcctgttatattcctggatgagccc
accactggcatggacccaaaagccaaaaggtttctgtggaactgcatcgtcagcgtcacc
aaagaggggagggctgtagtcctcacctcacacagtatggaggaatgtgaggctctctgc
accagaatggccatcatggtgaacggcagattccagtgtcttggatctgtacaacacttg
aagaacaggtttggtgatggctacaccattgttctccgcctgatggacaatatatcggag
ccggcctcgtgccccatcagcagcttcatgcagagctctttccccagcatcgagctgaag
gagcgccaccagagcgtgctgcagttccagctgccctcacacgcctgctgcctggctcgg
gtcttcgaggttctggccaacaaccacgaggagctgggcatcatcgacttctcggtttca
cagaccactctggaccaggtgtttgtcaactttgccaaagagcagacggatgacgacgtc
ctcactgatgttatcatcagcaacagtacagtacagaccaaactgaccactttggttaac
agggttaaccctcccaccatccttccactgccgcccatcactccccctcagccgagcaag
agcccgcagcagcccgcaaaatcatctggcagcaaacccaaggaggggaaatcaaaaaag
cccaaatctggcatggtgaaatctaaagagggcaaagctaatggggagaagagcagcagc
atggcaatgacacaaatacctcagaaagaggagaaggctcagaggacgagccggagggcc
agcggtggatcagacagcagttctggtggagctcagggagaaagtagtcaatccagtaaa
cgcaaagcggagagctccagtcaaaatccatctgcactgttcatagtcgacggcaaaaca
caggacagcgtactgtga
DBGET
integrated database retrieval system
