Gymnodraco acuticeps: 117544659
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Entry
117544659 CDS
T09661
Symbol
topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117544659 (topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gacu03032
]
117544659 (topbp1)
03400 DNA repair and recombination proteins [BR:
gacu03400
]
117544659 (topbp1)
DNA replication proteins [BR:
gacu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
117544659 (topbp1)
DNA repair and recombination proteins [BR:
gacu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
117544659 (topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
117544659
NCBI-ProteinID:
XP_034069806
UniProt:
A0A6P8TZE0
LinkDB
All DBs
Position
Unknown
AA seq
1507 aa
AA seq
DB search
MSKGDKEGFIVKFVESKTHQTEYAVKAYEAILELQSDKYLKRIDEDAVLQMEQKDKSLFV
FSSFTTPAFLHCKKLGCRVVSPLVVLYCLKQQHCVPKAEKPVYNMAMADITISCTSLDKA
TRTEVMDLVQLMGGRVYLDLNVSVTHLIAGEVGSKKYLVAASLAKPILLPTWVKACWEKS
QDSLVRYTDLPIEDYLCPVLRGCTVCVTGLSSTERKEVQRLCDQHGANYTGQLKMNQCTH
LIVSEPSGQKYECARKWNVYCVSLHWLFDSIEKGFCQDESRYTVDCNASKTTRPHTSTPT
GSNKKEEGSFLLGLSHISVNASMTINDTALTNATVSRLEGPDPIDTLDLTVCPADDILDG
CKLYLCGLPGKKLEKLRRLVNAAGGLRFNQPSEDLTHVVMGDLDQDFKVFLAKATHRPHV
VTVQWLLDSYTKGSLLPEACYLHPDCLPPSTPSVSVPAHHIPPSRFSTGPPAASPSTPRQ
TRAEEDLLSQYMDDDPTVVDMHTPAEGNSRKSFSMSADHWAPNHSRGPEPNSTLHEASEA
GLFSGKCFLLVGFGAEAEAQLSVLVTENGGRALIGRTRVVADYAVVPLLGCSVEATVDEV
VTDTWLAMCVEKESVLPLSSNPLFTAVPVMDGHLPLKDCVLSVSQFTGAERESLVELAKH
LGANVQDYFVRLANQKKGMLASSHLVLQTPEGTKYQAAKKWGFPAVTMYWLLESARTGRR
AEEGRFLVDLPPSLERDDESFVGGSQKPSMPPPACLSPEIPLLGVQSGKAVTPLDLARFK
SKVFRSVLDEMKPKVDISTPKQSNEGGRRNPLQKEPPLQLDTPSRFLSRDQLFRPSFNVK
DALGALETPGGRSKPGERVDTPLTDVINRNLKVALANSSRTGASDIQAISASPVFTKTTE
KQVPEKESGPLAGVVICVGKKLSKTQGELNGIAASLGADFRWACDDTVTHYIYQGRVGDN
TREYRGVKERGLHVVSQYWLEACAEEQRHVAESLYPFTYNPKMSLTLSQVPNNSQRSPPF
TRPQPQDITEAKDNKSEHIAPEETTPLRRVSDGSVNQDEMNDTTERTETLEMRVNLQKQL
QEIMSATKLTTGRRTSVRLSRVGSGGADSGPQTPDRFGRCGSRRTLEALRVSREAAMDIN
TEPSQSEQIVWDDPTAREERAKLADNLQWPGSPSQYSDPLAPPPPPPVEHVSVLRDSMTD
SELVEMAACDVIDQHMGQRVTMPPLEEPEMDILTPKAPSIAFPLANPPVAPEPQEEEKQP
PRFQLSSLSPQERIDYSHLIEELGGVVLDKQAFDPSCSHIIVGTPLRNEKYLAAMAAGKW
ILHRSYLEACRSVDRFIQEDEYEWGSSSILDALPSITSQQRRLAFAAMRWRKTLQGRSEQ
EGAFSGWTVMLNIDQSRESGFRRLLQSGRAKVLPSPSPSLYKETTHLFADFSRLKPGDFR
VDVSEATSQGVTCLKPEYIADYLMQEPTPPIELYFLTEASTEETPGTPSRKRKAAADNAK
LKKKRLN
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaggagacaaggaaggcttcattgtgaagtttgtggagagcaaaacacaccaa
acagagtatgctgtcaaggcttatgaggccattttggagctgcagtctgacaagtacttg
aaaagaatcgatgaagatgctgttttacaaatggagcaaaaggacaagtctctatttgtc
ttcagcagtttcaccaccccagcctttctgcattgcaagaagcttggctgtcgtgtagta
agtccactggtggtgctgtactgcctgaagcagcagcattgtgtccctaaagcggagaag
cccgtctacaacatggccatggctgacatcactatttcctgcaccagcctggacaaagca
acacggacggaggtgatggacctggtgcaactcatgggaggacgggtctatcttgatctg
aatgtatctgtcacacacctcatagcaggagaggtgggtagtaagaaatacctggtagct
gccagcctggctaaacccatcctgctgcccacttgggtcaaagcctgctgggaaaaatct
caggacagtcttgtcaggtatacagatctacctatagaggactatctgtgccctgtgctg
cgcggctgcactgtgtgtgtgacaggcctctccagcacggagcggaaagaggtgcagcga
ctctgtgaccagcacggggccaactacaccggtcagctgaaaatgaatcagtgtacacac
cttatcgttagcgagccatcaggtcagaagtacgagtgtgcgaggaagtggaacgtgtat
tgcgtgtctctacactggctgtttgacagcatagaaaagggcttttgtcaagatgagagc
aggtacactgtggactgtaacgcgtcaaagaccactcgaccacacacgtccacccccact
ggcagcaacaagaaggaggaaggttcatttctgttgggtttgagccacatctctgtcaat
gctagcatgacaataaatgacacagccctcaccaacgccaccgtcagccgcctggaaggt
cctgaccccatagatactctggatctcaccgtatgcccggctgatgatatactggacggc
tgtaagctgtatctgtgcggcttgccggggaagaaactggagaagctgcggcgtcttgtg
aatgctgcaggaggtctgcgcttcaaccagcccagtgaggatctcacacacgtggtcatg
ggagaccttgaccaggacttcaaggtgtttctggccaaggcaacacacaggcctcatgta
gtaacagtgcagtggctgctggacagttatactaaaggcagtctactcccagaagcgtgc
tacctccacccagactgtctgcctccctctacaccttctgtatccgttcctgcccatcac
atccccccctcccgtttctcaaccggtccccctgcagcaagtcccagcacacccaggcaa
acaagagcagaggaagatctgctctctcagtacatggatgatgaccctacagtagtggac
atgcacacaccagcagagggcaacagcaggaagtccttcagtatgtctgctgatcattgg
gcacccaaccacagcagaggaccagagccgaactccaccctgcatgaagccagcgaggcg
ggactgttctctgggaaatgcttccttctcgtgggctttggcgctgaggccgaggcccag
ctctctgtcctggtgacagaaaatggaggaagagctctgattggccgaacacgtgtggtg
gcagactacgccgtggtcccactgctgggctgttcagtggaggccacagtggacgaggtg
gtcactgatacctggctggccatgtgtgtggaaaaggagagtgttctgccgctgtcctcc
aaccctttgttcacagctgttcctgtgatggacggacatcttcctctcaaagattgtgtt
ctgtctgtcagccagttcacaggagcagagagggagtctttggtggagctggccaagcac
ctgggagcaaatgtccaggattactttgtgcgcctggccaatcagaagaaaggcatgctg
gccagctcccatctagtgctgcagacccctgaaggcacaaagtaccaggcagcgaagaaa
tgggggtttccagccgtcaccatgtactggttactggaatctgctcggaccggcaggagg
gcagaggaggggaggttcctagttgacctgccaccctcactggagagggatgatgagagt
tttgtcggtgggtcccagaagccaagcatgccccccccagcatgtttgtccccagagatc
cctttgctgggtgtccagagcggtaaggccgttaccccgctggatttggctcgcttcaag
agcaaagtgttccgctccgtgttggacgagatgaagcccaaagttgacatcagcaccccc
aaacaaagcaatgaaggcggcagaaggaacccgcttcagaaggaaccccctctgcagctg
gacaccccctcccgcttcctcagcagagaccagctgttcaggccctctttcaacgttaag
gacgcactaggagcattggagactccaggggggagatccaaaccaggagagagggtggac
actccgctgactgatgtcatcaacaggaacctgaaggtggctcttgccaatagctcccga
accggcgcgtcagatatacaagccatttctgccagccccgtatttaccaagaccactgag
aagcaggtcccagaaaaggaatctggtcctctggctggcgttgtgatctgtgtgggaaag
aagctgagcaaaacgcagggagagctcaacggcatcgctgcctcgctcggagctgacttc
aggtgggcttgtgacgatacagtgacacactacatctaccagggccgagtgggggacaac
acccgggaatacagaggagtgaaggagagaggactgcacgtggtctcccagtactggctg
gaggcgtgtgctgaggagcagaggcatgtcgcagagtctctgtatccgttcacctacaac
cccaagatgagcctgaccctcagccaggtgcccaacaactctcagaggtctccacctttc
acaagaccacaaccccaagacatcactgaggccaaggacaacaagagtgaacacattgcc
ccagaagagaccacaccattacgccgtgtaagtgatggaagcgtaaatcaagacgagatg
aatgatactacagaaagaactgagactctagaaatgagggtgaaccttcaaaagcagctc
caggagatcatgtcggccaccaagctgacgacagggaggcggacatcagtcagactcagc
agggtgggatcaggaggggccgactcgggcccccagactcctgatcggtttggacgctgc
gggagccgacgtaccctggaagctctgagggtctccagagaagcagctatggacataaac
acggagccatctcagagtgaacagatcgtttgggatgaccctacagcgcgggaggagagg
gccaagctggcggataatttgcagtggcctgggagtccctcccaatactctgaccctctc
gcacctccccctcctccccctgtagaacacgtctctgtgctcagggactccatgacggac
tctgagctggtggagatggctgcttgtgatgtcatcgatcagcacatgggccagagagtc
accatgcctccattagaggagccagaaatggacatcctcactcctaaagcccccagcatc
gccttccctctcgccaaccctccagtagcgccagagccacaggaggaagagaagcagcca
cccagattccagctttcctccctcagccctcaggagcgcatcgactacagtcacctcata
gaggagcttggcggtgtagtcctggacaagcaggccttcgaccccagctgctcacacatc
atcgtagggactcctctgaggaatgagaagtacctggcagcgatggcggcgggcaaatgg
atcctgcaccgctcgtacctggaggcctgccgctccgttgatcgcttcatccaggaggat
gagtatgagtggggcagcagctccatcctggatgcgttgccctccatcacctcgcagcag
aggaggctggcgtttgctgccatgcgctggaggaaaaccctgcaagggcgctcagagcag
gagggagccttcagtggatggacggtcatgctgaacatcgatcagagcagagaatcaggc
ttcaggcggttactacagtctggcagggcaaaggtcctgccgagtccctccccgtccctg
tacaaggagaccacccacctgttcgcagacttcagtcggctgaagcccggagacttccga
gtggacgtgtcagaggctacctcgcagggggtcacatgcctaaagcccgagtacattgca
gactacctcatgcaggaacccaccccgcccatcgagctgtacttcctgacagaagcttcc
actgaagaaactccaggcactccgtcacgtaaacgcaaagcagcagccgacaacgccaag
ctgaaaaaaaaacgtctcaactaa
DBGET
integrated database retrieval system
