Gymnodraco acuticeps: 117545062
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Entry
117545062 CDS
T09661
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gacu04121
]
117545062 (rnf40)
Enzymes [BR:
gacu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117545062 (rnf40)
Ubiquitin system [BR:
gacu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
117545062 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
SpoIIE
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
117545062
NCBI-ProteinID:
XP_034070619
UniProt:
A0A6P8U1K8
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MSGAGGGKRPSGGDSPPVPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQTMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLDENVQVLRKRIEPGTPV
SSTPAPPAPPLPGPTPMEEDGVSLASQTSAVPPPPLPASPNGGELAEKQDAHQEERLEGQ
KQPPPPTGSEEMNLKEPPHDSSSDASSPPPPLSDNAKGFLVTLAHSSEEELSLHLQDRMQ
FSKEAIACLVCVFDRLHSRIDSMCKQVQAAACDDDSQSDIINENHTLLDENTRLRDLTTL
LQGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKLRNREQKLNKHLAEAMEQ
LKSGYSTSSSGGISGGQITLNIQKFESLNAELEHNAELANSRMAELEKLQAELQEAVRES
EKLKMDLRNIPEDVVKETVEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHLRQI
EHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLI
SSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTGTLMLDETTNDSIEVKKEDDED
HEEEEERRKELERQRAREREREREADRERERDRERERQRSDELKRKDSDTLKMLRVELKK
AQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERKESKKL
ADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQLRE
KDDANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEGVLQST
LAALEKELTVRTQGLELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTARERE
SSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDKETVLT
KCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgccgggggaggaaaacgtccctcaggaggggacagcccccctgtcccacct
gagaagaagagcaaaaaagaggagaagacgactaccactttgatagagcccatacgcata
gcaggagtctcctctacggaggaaatggacatgaaggtcctccagttcaagaataagaag
ctatgcgagcgcttggagcagagacagacgatggaggatgagttacgagagaaaattgag
aagctggagaagagacaagccaccgatgacaccaccctgctgattgtcaaccgctactgg
tcccagttggacgaaaatgtgcaagttctgcggaaacgtattgagcccggtactccggtg
tcatcgacccctgccccacctgcaccccccctgcctggaccaacacctatggaggaagat
ggtgtcagtctggcctcacaaacttccgccgtgcctccacctcctctaccagcgagtcca
aacgggggggagctggcagagaagcaggacgcgcatcaggaagagcgcctagaagggcag
aagcagcccccgcctcctactgggtcagaagagatgaacctcaaggagccgccacacgac
tcatcatcagatgcatcgtcgccccctcctcctctaagtgacaatgctaagggcttcctg
gttactttggcgcacagcagcgaggaggagctcagcctgcacctccaagaccgcatgcag
ttcagcaaggaagccatcgcctgcctggtctgcgtcttcgaccggctacacagccgcatc
gacagcatgtgcaagcaagtccaggctgcagcatgtgatgacgatagccagtctgacata
atcaatgaaaaccacactctgctggacgaaaacactcgactgcgagacctgaccactctg
ctgcagggccgacaccacaagatgtccatggagtacaacgagttagtggacaaggtgacc
agctctgagaccaaggtgtctgagatggagacgacagtcgaggacctgcagtgggacatc
gagaaactgcgcaacagggaacaaaagctcaacaaacatctggcagaagccatggagcag
ctgaagtccggatacagcaccagcagctcaggaggaatctctggaggccagattactctg
aacattcagaagtttgagagtctcaatgcggagttggagcacaacgcggagttggcgaat
agccgcatggcagagttggagaaactgcaggcggagctgcaggaggcagtgagggagagt
gagaagctcaagatggatttgcggaatattccagaagacgttgtgaaggagactgtggag
tacaaatgtctgcagtcgcagttctccctgctttacaacgagtccctgggggtgaaaacc
cagctggatgaagcacgcgccctcctgctcactgccaagaacgcccacctccgacagatc
gagcacatggagagtgatgagctgtcgctccagaagaagctgcggaccgaggttatccag
ctggaggataccctggcccaggtgcgcaaagaatacgagatgttgcggatcgagtttgag
cagaacctggcagccaatgagcaagcagggccaatcaacagagagatgaggcatttgatc
agcagccttcagaaccacaacctgcagctgaagggggacgtgcagcgctacaagaggaag
ctgcgggaaacccagatggagatcaataagttgcgttgtcaaagtggcgacacggggact
ctgatgctcgacgagacgacgaatgacagcatcgaagtgaagaaagaggatgatgaggac
catgaggaggaggaggagaggaggaaggagctggagaggcagcgggcccgggagagagag
agggagagggaggccgaccgagagcgggagagggatcgggagagagagaggcagcgcagc
gacgagctgaagaggaaggactcggacactctgaagatgctcagagtagaactcaagaaa
gcccaggagtcccagaaagagatgaagctcttgttggacatgtacaaatcagctccaaaa
gagcagagggacaaagttcagctcatggccgccgaacgtaaatctaaagctgaggtggat
gagctgaggatgcgagtgcgagagctggaggagagggagaggaaggagagcaagaagctg
gcggatgaagatgccctcaggaagatccgagtggcagaggagaccatcgagcatctgcag
aagaaactcgcggccacgaaacaggaggaggaagccctgctgagtgagatggatgttaca
ggccaggccttcgaggacatgcaggagcagaacagccgcttgttgcagcagcttcgagag
aaagacgacgccaacttcaagctgatgagcgagcgaatcaaatccaaccagatctacaag
ctgctgaaagaggagaaggaggagctggctgaccaagttctcacattcaaaacccaggtg
gacgcacagctgctggtggtgcagaaactggaggagaaagagggcgtcctgcagagcaca
ctcgccgctctggagaaggagctgactgtccggacacaaggactagaactcaacaagagg
aaggcggtggaggctgcccagctggcggaggacctgaaggtgcagctggagcacacgcag
gccaagctgaaggagatccaggtctctgtggcggagaaccgcaccgcccgggagagggag
agctccaacctgaagagagcacaggaggatctgtccaggctgaggcggaagctggagaag
cagaagaaggtggaggtgtactctgacgctgatgagatcctgcaggaggagatcaaccag
tacaaggccaagctgcgctgcccctgctgcaacacacgagacaaggagacggtgctcacc
aagtgtttccacgtgttctgctacgagtgtctgaagatgcgttacgacacccggcagagg
aagtgccccaagtgcaactgcgccttcggggccaacgactttcaccgcatctacatcacc
taa
DBGET
integrated database retrieval system
