Gymnodraco acuticeps: 117545380
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Entry
117545380 CDS
T09661
Symbol
prdm1b
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117545380 (prdm1b)
Transcription factors [BR:
gacu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117545380 (prdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
STL11_N
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-met
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
117545380
NCBI-ProteinID:
XP_034071016
UniProt:
A0A6P8U2K2
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MKLESTPGDMSRWREVDFVLNCTYIVPDQVSDPSFSLPKAMTSIPRNLTFEYSTDNEVMG
VFSKEYIPQGTRFGPLQGVIYTKDNVPKQANRKYFWRIYSGGQLQNFVDGNDVNRSNWMR
YVNPACSSPEQNLVACQNGRDIYFYTIRPVEPNQELLVWYSQEFAQRLCGQHEDIKKKYM
SSDKDHESEYTKQHLPHKTWLTERTKGEVKEEREEDEEEKIDVEILERDTPPVTPYDQIM
DFSKKVEKEECDRESEDQGIIPSPEPQHREPILGINRPFLPDPHHALPSQHRSLPLHLHG
LYRGGVSSYPLYPQTKPLQPNYQLLPPYSPQYPRLLLPSYSPPFPWMMPSRGSLRYSSYP
GTDELPYPPVGPPNLLPVSIPYPMSSQGGLKELKPNISPPRGAPATPELSPLPKPDSQHQ
YNEQSSSGCEEAMNLSLDTVKSEPSIRNSHGHKSLPYPLHKQNGKIKYECNICSKTFGQL
SNLKVHLRVHSGERPFQCYLCKKSFTQLAHLQKHHLVHTGEKPHECQVCHKRFSSTSNLK
THLRLHSGERPYQCKLCGTKFTQYIHLKLHRRLHSSRDRPYRCQLCAQAFFHHFSLRIHQ
CSCCMANSSAPVNVHMKQMVEQFDASQEADMLTEAASARQVEEAVEHWLARTLEGEGKED
QKEATVLLKALTAAINAPAMPIAKSPIATSHHSPPLAYQERASVVHLHQWPTVKAEGQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaaattggagagcacgccaggagacatgagcaggtggagggaagtggactttgtccta
aactgcacctacattgtgccggaccaggtttcggaccctagctttagcctgcccaaagcc
atgacctccatcccacgcaacctcaccttcgagtacagcacagacaatgaggtaatgggc
gtgttcagcaaagaatacattccccaggggactcgctttggccctctgcaaggagtcatc
tacaccaaagacaatgttccaaaacaggccaacaggaaatacttctggaggatttacagc
ggtgggcagcttcaaaactttgttgatggcaatgatgtcaacaggagcaactggatgcgt
tacgtcaacccggcctgctcttcgccggaacaaaacctggtggcatgccaaaacggcaga
gacatctacttctacaccatccggccggtggagcccaatcaggagctgctggtgtggtac
agccaggagtttgcccagaggctctgcggccagcatgaagacatcaaaaaaaaatacatg
agttctgataaagaccatgagtcagagtataccaaacagcacctacctcacaagacatgg
ctcacagaaagaacaaagggagaagtgaaagaagagagggaagaagatgaagaggagaag
attgacgtggagattttggagagagacactccgccagtaacgccttacgaccagatcatg
gacttcagcaaaaaggttgagaaggaggagtgtgacagagaatcagaagaccaggggatc
attccctcccccgagccccaacacagagagcctatcctgggcataaatcgcccgttctta
ccagatccccatcatgcgctgccatctcagcacagaagtctccctctacacctccatggc
ctctacaggggaggtgtttcatcttaccccctttaccctcaaaccaaacccctccaaccc
aattaccagctccttcctccctacagcccacaatatcctcgccttctcctcccctcgtac
tcacctcccttcccttggatgatgccctcaagaggatcccttcgatacagcagctatccg
ggcacagacgaactcccctacccacctgtcggcccacctaatctgctgccagtgtccatc
ccgtaccctatgtcttcacaggggggtctgaaagaactcaaaccaaatatatctccccca
aggggcgccccagccaccccagagctttcccctctcccaaagcccgacagtcagcatcag
tataatgagcagtcctcctctggctgcgaagaagccatgaatctaagcctggacacggtg
aaaagcgaaccgtcgatacgcaacagccatggccataaatcgctgccctacccccttcac
aagcagaatggaaagatcaaatatgaatgcaatatctgctcaaaaacttttggacagctg
tcgaatctcaaggtccatcttcgagtgcacagtggtgagagaccattccagtgttaccta
tgtaaaaagagcttcactcagctggcccacctccagaaacaccacctggtccacacgggg
gagaagccacatgaatgtcaggtgtgtcacaaacgcttcagcagcaccagcaacttgaaa
acacacctgcgcctccactctggtgaaaggccataccagtgcaagctgtgcggcaccaag
ttcacccagtacatccacctcaaactgcaccgtcgcctccacagcagccgcgaccggccc
tatcgctgccagctctgcgcccaggccttcttccaccacttctccctacgcatccaccag
tgcagctgctgcatggccaactccagcgcacccgtcaatgtccacatgaagcagatggtg
gagcagtttgacgccagccaagaggcggacatgctcacagaggcggcgtcggcaaggcag
gtggaggaagcggtggagcactggttagctcgtaccttggaaggtgaagggaaagaggac
cagaaggaagccaccgtactactgaaagctctgacggcggcaatcaatgctccagcaatg
cccatcgccaaatcgcccatagctacgtcacaccactcacctccactggcctatcaggag
agggccagtgttgttcatctccaccaatggccaacagtgaaggcagaaggacagtga
DBGET
integrated database retrieval system
