Gymnodraco acuticeps: 117545517
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Entry
117545517 CDS
T09661
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117545517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117545517
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117545517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
117545517
NCBI-ProteinID:
XP_034071227
UniProt:
A0A6P8V1E8
LinkDB
All DBs
Position
Unknown
AA seq
2497 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKGAQNKLEKFVTELQNANEALRTQHERFKADSEQQYFDLEKR
LAESQEQILSATRDLQILVEEKKKADEELSTLKGIEAETPEDKPPQQQTKAKYEIEAEKR
ELARLLEKRTQEVENLSEDVKRLNEKLTETSKVKMELQLKLDNIQSSEASVQHRETRMEQ
EKELHEKKISWLTEQLKTKTEELLNTNREKGKEILELQGGLKNTKEQVTRLERQLTSLKQ
TRESQSKRADDLNNKLKQSKDEQSAMEQKYRSELNAHMKLSSLYKGSAADTGAKNQELSR
AVEELSKLVKDSGEANKALEKKVSEGEEVKTRLEAELSEKLKKMEKELENATMKAAGKHC
CVPSLTDEQLDVMCPSAANIAAIVKPGMKFFDLYNAYAECQTHLQLEKQETRRVNRVLDE
IVMEVESKAPVLKRQREEYESMQRSMASLCNKLEQARKEIYSLQKEKEEAKQHCDSIERE
KQRIDRQLEDTSTQVCTLLVQLEEARGNKVTKDDGSSSNISSPSEVTSPLSFRSVEELQK
QNQSLLGRLMELEEEKDLQKSQATSARVSELEASVDKLQKEVEQLREQRNQQKQLADSNA
RQRDMYKALLTQSTGFSLPPQGLDSPSQPVPVRPSVPATRSTPQRVAAAESAQTAQTKAA
LKQLNDAFTLYKKEKAENDRLLNETNDRLQKQLTDLRSSHAKLTSQLEFSSKRYEMLQDT
VSAQRREISALQDRNQKMAATAQRHEQIIHTMSQDLRQANEKLALEEVRVENLTKEKDML
RQAESRLNREKESILVEQRNQNLLLTNLKTIQLTMERTETETRQRLNNKVEHLEAELAAM
KTKQDQEVAQRHALGRTMDAQLLEAKKQLETQNTLQQKTRELLRSSEQQVAALRTQLAAS
AAAAPSSEAAPPSSSTPTTPATRAAGLRAPLRVRSPVPAASQQLSQSEQELAEVMGLLRT
AEERNRELTEQLENANARVEQYRAVVLTLEDSLKKEKESRSPLELRLKESDEVQKQLEKT
ILEAEKMKQQEREERRKAVDAVEKQLCEVQRCLKSSQTEQQEALERAAAAVTKEQRAIQE
SLLQTKLAGEAQAKYERELMLHAADVEALQELKKRSQQDGARKRELEEQLNKTSSLLQQK
SAALNSVERQLKEDLSNQRRRCEELGKQNALLHQQMDEMATRSRGLQTPWQQLDLSFSEE
GKTTKQILEILRFVRRDKEIAVAQCEASDEEAQRYKQRVEHQDRELKELQEALNSEREKM
QVTARTLAQQEEQLKKMETISALQQTVRMLSTEKDKLEQEMQQAQAKVKKLQSDISPLHQ
SLSLLSEKNGSMQADKRILEEDLKRWKSKTQQLMSQQKDGDVEERQKLSTEREAQQRRIT
QLAEETAKLKTELARSSASGNSAQSQLQAFRDSVARLTSERDTLKKDMETKNSDILERNR
TITQVKKIGRRYKTQYEELKAQHDKMVGETADKAGSEAGSSQEVQQELTKAQEELNQARE
ELSTLKEEAQKKVEEDQKGQQELEEAKKENQQTKDKFQEVQNQLTQKQNQLTQVQSQLSQ
IQTQQQQNQNQLTQSQKELQQAKTHSQQFQNQLKAAQSQSQARQNQIQQIQRELQQSKEA
LQQNLLNQKELQQTNQSSQQSHNQEVNNLKTALSQSESKVTVIQGRLDSLQKMVEEREAD
IKRLQEQLTEANKANRATQACQNQSSQSIQASDANVATDANHAQQEELAKLRQEMSESKA
REEQLKKQIAEKEEKTKKVFMGAKTKINQLNSAKVQLSKAIEEMKQSKEELEVRMNALKS
QYEGRLLRLDRELRELRGTQAQSDPREEPQDQSGAKAGDQARPADQRQISLKSPTQDRGS
SSLSDPPTANIRPTTSTPSPSNKPSPSQGSKSTPRASIRPMVTPATVSIPTPTATVMPTT
QTDSQEVLMGAGAAVHSTSSSLVNTPTSMTQPTSTQATAFVQPTQQQAANQDAGPSMDAE
RPSTSSFLSGTAGSKRSIEDEDGEEENTPPTLKKQKIALQMEGDEEIVEELQDEEKRQDS
PDDSQELPDDCFPVLAEDDEDVERVSQSVPSDMMSPQGSTIIRDVIVIDTDSESRESREG
EEKQDDEEEEDDEEEEEEEEEEEDDGYKEEEDDDEDEEAGESGMRGGEEGREAEEEEGEP
SEVCGASSDSQQPSHSNEGSSSATSESEPPRELVHFPPTSSTPSPSSLTPRLPHPRRPPH
PLPPRLYIQPPVQELGPPHTQRQSSQLRRPSVGRGPQLTPGIGSMQHFFDDDDRMVPSTP
TLVVPHRTDGFAEAIHSPQVTGLSTRFRFGPPEDLLPQTSASHSDLGQLASQGGLGMYES
PLFLAAHDEDGGGRSVPTTPLQVAAPVTVFTESLPSDSGDNMASQSVPMVTTSTGMASAA
DDGDEVFMEQEGEGAGIESSLDSQTDLESAGQQSDDASLPSTSQEPDTSSAAQRRTASGV
MSRGTRGGRMEARTLLSRRGTFFRGGRGGAMGRGGLA
NT seq
7494 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcctgctgcaggttctggagcggacagagttgaataaactcccgaaagga
gcccagaacaagctcgagaagtttgttacggagctgcagaatgctaacgaggcgctcagg
acgcagcacgagcgcttcaaagcagacagcgaacagcagtactttgaccttgagaagaga
ctggctgagagtcaggagcagatcctgtctgccaccagagacctgcagatactcgtggag
gaaaaaaaaaaagcagatgaagagctgagcactctgaagggaattgaggcagagacccct
gaagataaaccaccacaacagcaaaccaaggccaagtatgagattgaggcggagaagaga
gagctggcgaggctgctggagaagagaacacaggaggtggaaaacctctctgaggatgtg
aagcgtctgaatgagaagctgacagagaccagtaaggtgaagatggagctgcagctaaaa
ctggacaatatacagtcatctgaagcttctgtacagcacagagagacgcgtatggagcag
gagaaagagttgcatgagaagaaaatctcctggttaacagaacagctgaagaccaaaact
gaagagctgctgaacaccaacagagagaaaggcaaagagatactggaactgcagggaggt
ctgaagaacaccaaggagcaggtgacccgactggaaagacagctgacctctctgaagcaa
accagggaaagccagagtaaaagagctgacgatctgaacaacaaactgaagcagtctaaa
gacgagcagagtgccatggagcagaaataccgcagtgaactcaacgctcacatgaagctg
tcttctctttacaaggggtcagcggcagacacgggggcaaagaatcaggaactgagcaga
gccgtggaggagctcagcaagctggtcaaagacagcggggaagccaataaggctctagag
aagaaggtgtctgagggagaagaagtgaagacgcggcttgaggcagagctcagtgagaag
ctcaagaaaatggagaaagagctggaaaacgccacgatgaaggccgctggcaaacactgc
tgtgtgccctctctgactgacgagcagctggacgtcatgtgtccgtcagctgccaacatc
gctgccatcgtcaagcccggcatgaagttctttgatctgtataatgcgtatgcagagtgt
cagacacacctccagctggagaagcaggagacccgcagagtgaacagagttctggacgag
atcgtcatggaggtggagtccaaggctccagtcctgaagcgtcagagggaggagtacgag
agcatgcagaggtccatggcttccctgtgcaacaagctggagcaggcccggaaggagatc
tacagtttgcagaaagagaaagaggaggccaagcagcactgtgattccatagagagagaa
aaacagaggatagataggcagctagaggatacatctacacaggtgtgtactcttctggtg
cagctggaggaagctaggggtaacaaggtgaccaaggacgacggcagctcctctaacatc
tccagcccctcggaagtcaccagtccgctgtccttccgcagcgtggaggagctgcagaag
cagaaccaaagcctgctgggaaggctgatggagctggaggaggagaaggacctccagaag
agccaagccacatcagcgcgtgtgtccgagttggaggcgagtgtggataagcttcagaag
gaggtggagcagctgagggagcagaggaaccagcagaaacagctggctgactccaacgcc
cggcagagggacatgtacaaggccctgctgactcagagcaccggcttcagcctgcccccc
caaggtctggattctccttctcaacctgtacctgttaggccgtcagttcctgctactcgc
tctactcctcagagagttgctgctgctgagtcagcacagactgctcagactaaagctgcc
ttaaaacagctgaatgacgccttcactctgtataagaaggagaaggcagagaacgacagg
ttgctgaatgaaaccaacgaccggctgcagaagcagctcactgatctccgctccagccac
gccaaactcacctctcaacttgagttcagcagcaagaggtacgagatgctccaggacacc
gtgtcagcccaacgcagagagatctccgctctacaggacaggaaccaaaagatggctgcc
actgcccaacggcacgagcaaatcatccacaccatgagccaggacctgcggcaggctaac
gagaaactggcgctggaagaggtgcgcgtcgagaacttgacgaaagagaaagacatgttg
agacaagcagagagtcgactcaatagagagaaggaatccattctggtggagcaacgcaac
cagaacctgctgctgaccaacctgaagaccatacagttgacgatggagcgtacagagaca
gagactcgccagagactgaacaacaaggtggagcatttggaggcagaactggctgcaatg
aagaccaagcaggaccaggaagtagcacagagacacgccctggggcgcaccatggacgct
cagttattagaggctaaaaagcagctggagacccagaacaccttgcagcagaagaccagg
gagttgttgcgcagctctgagcagcaggtggcagcactgagaactcagctggctgcttct
gctgctgctgctccatcctctgaggctgcccccccctccagcagcacccccaccacccca
gctaccagagctgcaggcctcagagctccactcagagtgcgctctccagtgccagcagcc
tcgcagcagctcagccaatcagagcaggagcttgcagaggtgatgggtctcctgcgtact
gcagaggaacggaacagagaactgacagagcagctggagaatgcaaatgctagggttgag
cagtacagggccgtggtgctgactctggaggacagtctgaagaaagaaaaggagtctcgc
tcccctctggagctccgactgaaggagtccgacgaagttcagaagcagctggagaaaacc
atcttagaggctgagaagatgaagcagcaggagagagaagagaggagaaaggctgtggat
gctgtggaaaaacaactgtgtgaggtgcagcgctgcctgaagtccagccagacggagcag
caggaggcgctggagagagctgctgctgctgtcactaaggagcagagagccatacaggag
agcctgctgcagactaagctagctggagaggcgcaggctaagtatgagagggagctcatg
cttcatgctgcggacgtggaggccttgcaggagctgaagaaacgatcccagcaggatgga
gcacggaagagagagctggaggagcagctgaacaagacctcgtccctcctgcagcagaaa
agtgcagctctgaactcagtggagaggcagctcaaggaggatctgtccaatcagaggcgt
cgctgtgaggagttggggaagcagaacgccctcctgcaccagcagatggatgagatggcc
accaggagtcgtgggctgcagaccccctggcagcagctcgacctgtccttcagtgaggag
gggaagaccaccaagcagatcctggaaatactcaggtttgttcggcgtgataaagagatc
gctgtggctcagtgcgaggcgtctgatgaagaagctcagcgctacaaacagcgagtggaa
caccaggacagagaactgaaggagctgcaggaggctctgaactctgagagggagaagatg
caggttacagccaggactctggcccagcaggaggagcagctgaagaagatggagaccatc
agtgctctccagcaaaccgtcaggatgctgagcacagagaaggacaaactggaacaagag
atgcagcaggcgcaggctaaagttaagaagctgcagtcagacatcagcccgctgcaccag
tctctgtctctgctgtcggagaagaacggctccatgcaggccgacaagaggatcctggag
gaggacctaaaacgctggaagtccaaaacccagcaactgatgagccagcagaaagacggg
gacgtggaggagagacagaaactgtccactgagagagaagctcagcagagacgcatcaca
cagctcgctgaggagacggccaagctgaagactgaactcgcaagatccagcgccagcggg
aactcggctcagtctcagctgcaggccttcagagactcggtggcccgtctgacgtcagag
agagacactctgaagaaagacatggagactaagaacagtgacatcctggagaggaaccgg
accatcactcaggtcaagaagattggacggcgctacaagacgcagtatgaggagctgaaa
gcccagcatgacaagatggttggggaaactgctgataaagcaggaagtgaggcggggtcc
agccaggaagtgcagcaggagctgactaaagcccaggaggagctcaaccaggccagagag
gagctgagcacactgaaagaggaggcgcagaaaaaagtggaggaggaccagaagggccag
caggagctggaggaagccaagaaggagaaccagcagaccaaggataagttccaggaggtc
caaaaccagctgacccagaaacagaaccagcttacacaggtccagtcccagttgtcccag
atccagactcaacagcagcagaatcagaaccagctgacccagagtcagaaagagcttcag
caagccaagacgcacagccagcagttccagaaccagttgaaagcagctcagtctcagtct
caggcccgccagaaccagattcagcagatccagagggagctccagcagtctaaagaggcg
cttcagcagaacctgctcaatcagaaggagctacagcagaccaatcagagcagtcaacag
agccacaaccaggaagtcaacaacctcaagactgctctcagccaatcagagagcaaggtg
actgtaattcagggccgcctggacagcctgcagaagatggttgaagagcgtgaagccgac
atcaagcgtctgcaggagcagctaactgaagctaacaaagctaaccgagcaacgcaggcc
tgccagaaccagagttcccagtccatccaggccagtgatgctaacgttgctactgacgct
aaccatgcccaacaagaggagcttgcaaaactcagacaagagatgtctgaaagcaaggcc
agagaggagcagctcaaaaagcagatagctgaaaaagaggaaaagactaaaaaggtcttc
atgggagccaagaccaaaatcaaccaactaaacagtgctaaggtgcagctcagtaaggcg
atagaggagatgaaacagagtaaggaagagctggaggtgaggatgaacgccctcaagtct
cagtatgaaggacgacttctgcggctggacagagagctgagagaactgagagggacacag
gcacagtcggacccccgagaggagccccaggaccagagtggagctaaggcgggggatcag
gccagacctgcagaccagagacagatctctctgaagagtcctactcaagaccggggaagc
tccagcctgtccgacccccccactgcaaacatccgccccaccacaagtactccatctcct
agcaacaagccaagcccctcccaaggtagcaagtccacacctcgtgccagcatccggcca
atggttaccccagcaactgtgtccatcccaacacctaccgccactgtcatgccgaccaca
cagactgacagtcaagaggtgctgatgggtgcaggagccgctgtgcactccaccagctcc
agtctggtgaacacacccacttcaatgactcagccaaccagcacccaggccacagctttt
gtccagcccacccagcagcaggcagccaatcaggacgcaggccccagtatggatgcagag
cgaccatctacgtcctcttttctgagtggaacagcaggttcaaagcgaagcatagaggat
gaagacggggaagaggagaacacacctccgaccttgaaaaaacaaaagatagcactgcag
atggaaggtgatgaggagattgtagaagagctgcaggacgaggaaaagcgtcaggattca
cctgatgacagtcaggagcttccggacgattgtttccccgttctagctgaagatgacgag
gatgtggagagagtgtcccagtccgtcccctctgacatgatgtcccctcagggctccact
attatccgggacgtcatcgtgatcgacacggacagcgagagccgtgagagtagagagggg
gaggagaagcaggatgacgaggaggaggaagatgacgaggaggaggaggaggaggaggag
gaagaagaagatgacgggtataaggaggaagaggatgatgatgaagatgaggaggctggt
gagagcgggatgagaggaggagaggaaggcagggaggcagaggaggaggaaggagagccg
tcagaagtgtgtggagcgtcttcagactcgcagcagccgtcccacagcaatgaaggcagc
agcagcgccacatcggagtccgagcccccccgagagcttgtccacttccccccaacctcc
tctacaccctccccctcctccctcaccccccgcctgccacacccacgcaggccccctcac
cccctcccaccaagactctatatccaacccccggttcaagagctgggacccccacacaca
cagagacagtcctctcagctgcgcagaccctcagtgggacgcggacctcagctcaccccg
ggaataggcagcatgcaacatttctttgatgatgacgacaggatggttcccagtactccc
accctggtggtcccacaccgcaccgatggctttgctgaggccatacactctcctcaggtg
acgggtctgtccaccaggttcaggttcggacccccagaagacctgctgcctcagacctca
gcctctcactctgacctgggacagctggcctcgcaaggaggtctggggatgtacgagtcc
cctctgttcctggctgctcacgatgaagacggaggagggaggagcgttcccaccaccccc
ctgcaggtggctgcaccagtgaccgtcttcacggagtctctgccctcagacagtggtgac
aacatggcatcccagtcggttcccatggtaaccacatccactgggatggcgtctgctgca
gatgatggggacgaagtgttcatggagcaggagggagagggtgctggtattgaatcttct
ctggacagccagacagacctggagtcagcaggtcagcagagtgatgatgcttcactgccc
tctaccagccaggagcctgacaccagcagtgcagctcagcggcgcacagcaagtggtgtg
atgagcagaggaaccaggggggggaggatggaggcgcgcacgctgctcagccgcagaggc
actttctttcgaggaggaaggggaggggccatgggcagagggggcttggcctga
DBGET
integrated database retrieval system
