Gymnodraco acuticeps: 117546060
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Entry
117546060 CDS
T09661
Name
(RefSeq) thrombospondin-4-B-like
KO
K04659
thrombospondin 2/3/4/5
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04145
Phagosome
gacu04510
Focal adhesion
gacu04512
ECM-receptor interaction
gacu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117546060
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117546060
09144 Cellular community - eukaryotes
04510 Focal adhesion
117546060
09142 Cell motility
04820 Cytoskeleton in muscle cells
117546060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gacu04131
]
117546060
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gacu04147
]
117546060
00536 Glycosaminoglycan binding proteins [BR:
gacu00536
]
117546060
Membrane trafficking [BR:
gacu04131
]
Endocytosis
Phagocytosis
Opsonins
117546060
Exosome [BR:
gacu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117546060
Exosomal proteins of colorectal cancer cells
117546060
Exosomal proteins of bladder cancer cells
117546060
Glycosaminoglycan binding proteins [BR:
gacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117546060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
117546060
NCBI-ProteinID:
XP_034072034
UniProt:
A0A6P8U5I6
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MGVWTALILASHLLLNLSLRVEAQALVYDLLTSPDCLPDLLQGGLVEQGVNEAFILTSFK
LQPKTGTSIFALFNPRDNSKYFEFTVMGKLNRAVLRYLRSDKRMTSVTFNNLVLADGQQH
RLLFHLKGMQQGPGGVELHLDCRLVETIRDLPAAFQGLPAGYGTVDLKTMQARDQESLDE
LKLVVGDTFENVASIQDCHFQQKDSVQTLGVNTKQLSNQMLDLTKVINELKDVLIQQVKE
TSFLRNTISECQACGLGGTEVVKPRCGAGVCFRDVRCIETADGVECGPCPDGYTGDGFNC
DDVDECQFNPCFPGVKCVNTAPGFRCDACPLGYSGLAIEGVGIIYAQTNKQVCDDVDECK
ATDNGGCAANSACQNSEGSYHCGSCKTGFSGDQVKGCKPEVSCGNSLTNPCDLNSLCTME
RDGTATCECGIGWAGNGYLCGKDTDIDGYPDDKLKCKDSSCKKDNCVFVPNSGQEDADRD
GHGDTCDDDADGDGIPNEQDNCPLKPNVDQRNSDKDSHGDACDNCRIVENPDQRDTDSDG
RGDACDDDMDGDGLKNFLDNCQLVQNRDQLDRDGDGVGDACDSCPDTPNPNQSDIDNDLV
GDSCDTNQDSDGDGHQDTKDNCPFVINSSQVDTDKDGLGDECDDDDDNDGIPDSIPPGPD
NCRLVPNPDQIDDNGDGVGDVCESDFDQDKVIDRIDNCPENAEVTLTDFRAYQTVVLDPE
GDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFG
YQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSRSGPGEHLRNSLWHTGDTND
QVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRVRFYEGTQLVADSGVTIDTTMRGGRL
GVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTQHGGDAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtttggacagccctgattctggcctcacatctgctgttaaatctcagcctacgt
gtggaagcccaggctttagtgtatgatctgctcacctcaccggactgcctgccggacctt
ctgcagggcggcctggtggagcagggcgtgaacgaggctttcatcctgacctccttcaag
cttcagcccaaaacaggaaccagcatcttcgccctgttcaacccgcgggacaacagcaag
tacttcgagttcaccgtcatggggaagctcaacagagctgtgttgcgttacctgcggagc
gacaagaggatgacctcggtgaccttcaacaacctggtgctggcggacggccaacagcac
cggctgctgttccacctgaagggcatgcagcagggtccggggggcgtggagctgcatctg
gactgcaggctggtggagaccatcagggacttacctgccgccttccagggtttacctgca
ggatacggcaccgtggacctgaagaccatgcaggcccgagaccaggagagtttagacgag
ctcaagctggtggtcggggacacgtttgagaacgttgcttcaatacaagactgccatttc
caacaaaaagactccgtccaaactctgggggtcaacacgaagcagctgtccaaccagatg
ctggacctaacgaaggtgataaatgagctgaaagacgtcctcattcagcaggtcaaagag
acttcattcctcagaaacaccatctcagagtgtcaggcctgcggtctgggggggactgag
gtggtgaaacccaggtgtggtgcaggtgtgtgtttccgtgatgtacggtgcatagagacg
gccgacggggtggagtgcgggccgtgtccagacggatacaccggggacggattcaactgt
gatgatgtggacgagtgccagtttaacccttgcttccctggagtgaagtgtgtgaacacc
gccccggggttcagatgtgacgcgtgtcctctgggatactccggcctggcgatagagggt
gtgggcatcatatatgcacagaccaacaaacaggtctgtgacgacgttgacgaatgcaaa
gcaacggacaacggaggttgcgccgcaaactcagcctgtcaaaactctgagggctcgtat
cactgcggcagctgtaagacgggtttctccggagaccaggtgaagggctgcaagccggag
gtcagctgtgggaacagcctcacaaacccctgtgatctgaactctctgtgcaccatggag
agggacggcacggccacctgtgagtgtggaattggctgggccggtaatggatacctgtgt
gggaaggacacagatatcgacggatacccggatgacaaactcaaatgtaaagactccagc
tgcaaaaaggataactgcgtgttcgtccctaactcgggtcaggaggacgccgacagggac
ggacacggagacacctgtgatgacgacgcagacggtgacggtatacccaacgaacaggat
aactgtcctctgaagcccaacgtggaccagaggaacagcgataaggacagccacggagac
gcctgtgataactgccgcatcgtggagaacccggaccagagggacacggacagtgacggc
cggggggacgcctgcgacgacgacatggacggagacggcctgaagaacttcctggataac
tgccagctcgtccagaaccgagaccagctggaccgagacggagacggagtgggagacgcc
tgcgacagctgccccgacacgcccaacccaaaccagtctgacattgacaacgacttggtg
ggagactcctgtgacacgaaccaggacagtgatggcgacggtcaccaggacacgaaggat
aactgccccttcgtgataaacagctctcaggtcgacaccgataaagacgggctcggagac
gagtgtgatgatgacgatgataatgacgggatcccagacagcatccccccgggacccgat
aactgccggctggtgcccaaccccgaccagatcgacgacaacggtgatggcgttggagac
gtgtgtgagtcggacttcgatcaggacaaagtgatcgacaggattgataactgtcctgag
aacgcggaggtgacgctgaccgacttcagggcgtatcagacggtggtgctggaccccgag
ggcgacgctcagatagaccccaactgggtggtgttgaaccagggaatggagatcgtgcag
accatgaacagtgacccaggacttgctgttggttacactgcgttcagcggcgtggacttc
gaggggaccttccacgtgaacacggtgaccgacgacgactacgccggcttcatcttcggc
taccaggactcctcctcgttctacgtggtgatgtggaagcagacggagcagacgtactgg
caggcgacgcccttcagagccgtggccgagcccggcatccagctcaaggcggtgaagtct
cgctcgggccctggagagcacctgaggaactctctgtggcacaccggagacaccaacgat
caggtgcgtctgctgtggaaagaccccaggaacgtgggctggaaggacaaggtgtcgtac
agatggtacctgcagcaccgcccgcaggtcggatacatcagggtgcggttttatgaagga
acccagctggtggcggactctggcgtaacgatcgacacgaccatgagaggagggcgactc
ggagtgttctgtttctctcaggaaaatatcatctggtccaatctgaaataccgctgcaat
gacacaatccccgaggacttccaggagttcagcactcagcacggcggagacgcgcactga
DBGET
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