Gymnodraco acuticeps: 117546218
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Entry
117546218 CDS
T09661
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03013
Nucleocytoplasmic transport
gacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117546218 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
117546218 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117546218 (thoc5)
03041 Spliceosome [BR:
gacu03041
]
117546218 (thoc5)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117546218 (thoc5)
Spliceosome [BR:
gacu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117546218 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
117546218
NCBI-ProteinID:
XP_034072259
UniProt:
A0A6P8U650
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MPIFARFKDIRVFCILESVMSSDALKKRKSKVVRSEGGTPEMKRGREAEQQDVRVYNEEV
ELDSRDPEQDFLQYKESCEGLATMMSEIQELKANGAKEGSAEVEQRRMQGCIHFMNLKKL
NRLAHMRLKRGRDQTHDAKQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVS
ESEFYQEAPDEISRPHLTKNDPHQLTLARLDWELEQRKRLAEKYKECQSTKEKIQKSIEV
KKEHLTSLQPGLNAIMQASLPVQEYLAMPFEQAQIQTEVARHLPPALYVLFVQANAYGQA
CDKNLSVSISGDVDEAKALSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRKEM
LKRHPLSLCLDLKCKDGSILHLHFYYLMNLNITTVKAKVSTSTDLNSAISAGDLLKSDTL
LSCLYSSDQGKETPNPANRYQFDKVGIVTFADYVEELGHPYMWVQSLGGLHFPKDSSEGV
SVGSSLSASHMENTMKLLRGRLQARLALHKQFGSLEHSIIPVSSECQHLFPAKIISRLSR
WTTITQQEYMELPYTRHVSDAGLAKESDLYFMSVVERGTARLQAALVLSPRYPEISPLFS
LSLSWKGERTGRTDDNLRAMESEINVFKNELQGPRPGHQLLTNQISRLCVCLDVYLETEG
QDDSVEGPLEFPREKMCLRTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcccattttcgcacgatttaaggatatcagggttttttgcatattggagtcagtcatg
tcgtcggacgccctgaagaagcgaaagtcaaaggtggtccgcagtgaaggaggaacccca
gagatgaagcgaggtcgagaagcggagcagcaggatgtgcgtgtgtacaatgaggaggtg
gagctggacagcagggaccctgagcaggacttcctgcagtacaaagagtcatgtgagggt
ttggccacaatgatgagtgagatccaggagctcaaggctaatggagcaaaggaagggagt
gctgaggtcgagcagagacgtatgcagggatgcatccacttcatgaatctgaaaaaactc
aaccgcctggctcatatgcgactaaagagaggcagagaccaaacacacgatgcaaagcag
aaagtggatgtgctgcaccttcagttacagaacctgctctatgaagtcatgcatcttcag
aaggagatcagcaagtgtctggagttcaagtcaaagcatgaagagatcgacttggtgtct
gagtcagagttttaccaggaagcgccagacgagatttccaggcctcacctcacaaaaaac
gatccccaccaactcacactggcccgactggactgggagcttgaacagaggaagaggttg
gcagaaaaatacaaggagtgccagtccacgaaggagaagatccagaagagcatcgaggtg
aagaaggaacatctgacgagcctgcagcctggactcaatgccatcatgcaggcctctctc
cccgtgcaggagtaccttgccatgccgtttgaacaggctcagatacagacagaggtcgcc
cgccacctgcctccagccctctatgtgctgtttgttcaggccaacgcctatggccaagcc
tgtgacaagaacctgagtgtctccatcagtggtgatgtggatgaggccaaggccctgtcc
aaaccgccagaagattcccaggatgacgagagtgactcagatgcagaggaggagcaagaa
aagacgaagagaagaaggccaactacagggggccagctggatgacaaaagaaaggagatg
ctgaaaaggcaccctctgtcgctctgcttagacctcaagtgtaaagatggcagcatcctc
catctccacttctactacctgatgaatctgaacattacgactgtcaaggccaaggtctcc
acctcaacagacctcaactcggccatcagcgcaggggacctgctgaaatcagacactcta
ctcagctgtctctacagcagcgaccagggcaaagaaacacccaatccagcgaatcgctac
cagtttgataaagtcgggattgttacctttgctgattatgtggaggagctgggccatccc
tacatgtgggttcagagtctgggaggactacatttccctaaagactcctcagagggtgtg
agtgtgggcagttctctgagtgccagccacatggagaacaccatgaagctgctgagggga
cggctgcaggctcgcttggctttgcacaaacagtttggctctttagagcacagcatcatc
ccggtctccagtgagtgtcagcacctctttcctgccaagatcatctcccgtttatcccgc
tggaccaccatcactcagcaggagtacatggagctgccatatactcgtcatgtgtctgat
gctgggctggcaaaggagtcagatctgtactttatgtctgtggtggaaagaggcacagct
cgtctccaggccgccttggtgctgagtccccgttacccagaaatctcccccctcttctcc
ctctccctcagctggaagggagagcgcaccggacgcacagatgacaaccttcgagccatg
gagagcgagatcaatgtgttcaaaaatgaactgcaggggccccgcccgggacaccagctc
ctgaccaatcagatttcacgcctctgtgtctgcctggatgtttatttggagactgaaggt
caagatgacagtgtggagggaccactagagtttcccagagaaaagatgtgcctgcgcacc
gtcaggggtccaaatcgtctgaagccgttcaagtacaaccaccctcagggcttcttcagt
caccgctag
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integrated database retrieval system
