Gymnodraco acuticeps: 117546405
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Entry
117546405 CDS
T09661
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117546405 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117546405 (smarca2)
03036 Chromosome and associated proteins [BR:
gacu03036
]
117546405 (smarca2)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117546405 (smarca2)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
117546405 (smarca2)
Chromatin remodeling factors
BAF complex
117546405 (smarca2)
PBAF complex
117546405 (smarca2)
GBAF(ncBAF) complex
117546405 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
117546405
NCBI-ProteinID:
XP_034072512
UniProt:
A0A6P8V5P5
LinkDB
All DBs
Position
Unknown
AA seq
1603 aa
AA seq
DB search
MSTPLDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGI
QGQSEYSQDGMYPMHKSMEGMNEKTMADAMHFGHMKGVGMRSLHSGMGPPQSPMDQHSQG
YISPHPSPMGVHEHASSPMSGGGGGGGPKPPPPSQSGPMMPTDPQSAGPNMSNMSPQGRG
PSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRTLPTMQQQQQQQQLQQQQQQ
QAPSASPYNRPPGMPMAPLGGLQSSPCPTPTMQGHNQSTGPKPWPEGQGVENQANAQKHL
TPIPSGRPSPAPPQASAVPAGPMPGSSLTPQPPGQQVSPMLQMQKQNRITPIQKPQGLDP
VGILQEREYRLQARIAHRIQELESLPGSLAPDLRNKATVELKALRLLNFQRQLRQDVVAC
MRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQHA
KDFKEYHRSISGKMQKLTRSIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLID
QKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKDKKKKKKKKKVDGDGEGTSAIGPDG
EPMDESSQTSELPVKVIQTETGKVLQGTDAPKSGQLEAWLEMNPGYEVAPRSDSEESSSE
FEEEDEEEAKAERKEEIEERKIIDPSGIEEFVADTTDIILSAIQVDDEYSVPTGQTSTAS
YYGAAHAVIERVEKQSTLLINGTLKHYQVQGLEWMVSLYNNNLNGILADEMGLGKTIQTI
GLITYLMEHKRINGPFLIIVPLSTLSNWVYELDKWSPSVVKVAYKGTPVLRRGLVPQLRS
GKFNVLLTTYEYIIKDKNILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT
GTPLQNKLPELWALLNFLLPTIFKSCNTFEQWFNAPFAMTGERVDLNEEETILIIRRLHK
VLRPFLLRRLKKEVESQLPEKVEYVVKCDMSAIQKVLYRHMQRGILLTDGSEKDKKGKGG
SKTLMNTIMQLKKICNHPYIFQHIEESFSEHLGFPNGVISGLELYRASGKFELLDRILPK
LLATNHRVLLFCQMTTLMTIMEDYFSYRNFQYLRLDGSTKADDRAMLLKKFNEQGSQYFI
FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE
EKILAAAKYKLNVDQKVIQAGMFDQKSSGNERQAFLQAILLTEEQNEVGCELFCNKKINE
EDEIPDDETLNQMIARNEDEFELFMRIDMDRRREDARNPKRKPRLMEEDELPSWIIRDEA
EVDRLTYEEEEEKMFGRGSRCRRDVDYSDTLTEKQWLRAVEDGNLEEMEEEIRLKKRKRK
RRQDKDSSSRDEGGSKAKKKRGRPPADKHSPNHPKVTKQMNTIIDTVINYRDGAGRQLSE
VFVQLPSRKELPEYYELIRKPVDFKKIKDRVRNHKYKGVGDLERDVMLLCHNAQTFNLEG
SQIYEDSIVLQSVFKSARQKIAKDEESEDDSDEDDDDDDDDDDDESETEAKSVRVKIKRK
KEARSHGKGKKKQSRGKAKPVVSDDDSDEDPDDNDQSDKSDDD
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctttagacacatcaggtggtatgtcccatcctggcccttctccgggggca
ggtctgtccccagggcctatcctgggccccagccctggacctgacccctccccaggctct
gttcacagtatgatgggacccagccctgggcctggaacacccaatgcaccgcacggcatt
cagggtcaaagtgaatactctcaggacggcatgtatcctatgcacaagtctatggagggg
atgaatgaaaagaccatggcagatgcgatgcactttggtcacatgaaaggtgtcgggatg
agatctctgcatagcggcatgggacccccacagagtccgatggaccagcacagccaagga
tacatatccccacatccgtccccaatgggggtccatgagcatgcttctagtcccatgtca
ggaggtggaggtggtgggggacccaaacccccacctccctcccagtccggccctatgatg
cccacggaccctcagtcagccgggcccaacatgtccaacatgagccctcagggccgcgga
ccctctgccttcagtccggtgcagctgcagcagctcagagcgcagatcctggcctacaag
atcctgggccgaggccaacccctgccagaaaacctccaactagctgttcagggcaagaga
actctacccacaatgcaacagcagcagcaacaacagcagcttcagcagcagcagcagcag
caggcacctagtgctagtccttacaacaggcctccgggtatgccaatggcacctttgggt
gggctgcagtcaagcccctgccccaccccaaccatgcaaggacacaatcaaagcacagga
cccaagccttggcctgagggtcagggtgttgaaaatcaagccaacgcccagaagcacctc
actcctattcccagtggacgcccgtcccctgcacccccccaggcctctgctgtgccagcc
gggcccatgccaggcagttcactgaccccccagcctccaggtcagcaggtgtcccccatg
ctccagatgcagaaacagaaccgcatcacgcccatccagaagccccagggcctggaccca
gtggggatcctgcaagagagagagtacaggttgcaggctcggattgctcatcgaatccag
gagctggaaagtttgcccggctctctcgcccccgacctgaggaataaagccaccgtggag
ctcaaggccctgcgtctgctcaacttccagcggcagctgagacaggacgtggtggcgtgc
atgaggcgagacaccaccctggagacggccctcaactcaaaggcttacagacgcagcaag
aggcagacgctgagggaggcgcgcatgacggagaagctggagaagcagcagaagctggag
caggagaagaagcgcagacagaaacaccaggaatatctcaacagcatccttcagcatgca
aaggacttcaaagagtatcaccgctcgatttctggaaaaatgcagaagctcaccagatcc
atcgccacctggcacaccaacacagagagggagcagaagaaggagactgagagaatcgag
aaggagaggatgaggaggctcatggcagaagatgaagaaggctaccgaaagctaatcgac
caaaagaaagacaagcgtctggcctacttgctgcagcagacggatgaatacgtggctaac
ctcaccaccctggtgtacgaacacaaagctgctcaggctgccaaggacaagaaaaagaag
aagaagaaaaagaaggtggatggagacggtgagggcaccagcgctattggacctgatgga
gagcccatggacgagagcagccagacgagtgagctgccggtcaaagtgattcagacggag
accgggaaagttttgcagggaacggatgctcccaaatccggccagctggaggcctggctc
gagatgaaccctgggtatgaggtggccccgcggtcggacagtgaggagagcagctcagag
tttgaggaggaggacgaagaggaggccaaggctgaaagaaaagaagaaattgaagaaagg
aagataatcgatcccagtggaattgaggagtttgtcgctgataccacggatattattctg
tcggccattcaggtggacgatgagtacagtgttcctaccggacaaaccagcaccgcgtct
tactacggtgccgcccacgctgtcattgagagggtggagaagcagtcaacgctgttgatc
aacggcacactcaaacattaccaggtccaggggctggagtggatggtgtctctgtacaac
aacaatctaaacggcatcctggctgatgaaatgggcctcggcaaaacaatccaaaccatt
ggccttatcacctacctgatggagcacaagaggatcaacgggcccttcctcatcatcgtt
cctctctcgactttgtctaactgggtgtatgaacttgacaagtggtccccatctgtggtt
aaggttgcttacaaggggacccctgtgttgcgccgtgggcttgtgcctcaacttcgcagt
gggaagttcaacgtcttgctgaccacttatgaatacatcatcaaagacaagaacatactg
gccaagattcgttggaagtacatgattgtggacgagggtcaccggatgaagaaccaccac
tgtaagctgacccaggtgttgaacactcactatgtggccccgcgccgcctcctcctcacc
ggcacccccctgcagaacaagctgcccgagctgtgggccctgctcaacttcctgctgccc
accatcttcaagagctgcaacaccttcgagcagtggttcaacgccccattcgccatgaca
ggagagagggtcgacctaaatgaggaggagaccatcctgattatccggcgtttgcacaag
gtgctccgccccttcctgcttcgcagactgaagaaagaggtggagtcccagctgccagag
aaggtggagtatgttgtcaaatgtgacatgtctgccatacagaaggttttgtaccgccac
atgcagagaggcatcctcctcactgacggctcagagaaagacaagaagggcaaaggaggg
tcaaagaccctgatgaacaccatcatgcagctgaagaaaatctgcaaccatccctacatc
ttccagcacattgaggagtctttttcggagcacttgggctttccaaatggcgtcatcagt
gggctggaactgtatcgagcttcggggaagtttgagctccttgatcgcatcctgcccaaa
ctgcttgccaccaaccacagagtgctgctgttctgccaaatgaccactctcatgaccatc
atggaggactacttcagctaccgcaacttccagtatttacgtctcgacggaagcaccaag
gctgacgaccgcgcaatgctgctgaagaaatttaatgagcaaggatctcagtacttcatc
ttcttgctcagcaccagagccgggggcctcggcctcaacctgcaggccgccgacaccgtg
gtcatcttcgacagcgactggaatccacaccaggacctgcaggctcaggaccgggctcac
cgcatcggccagcagaacgaggtgcgcgtgcttcgtctctgcaccgtcaacagtgtggag
gagaaaatcctggcagctgccaaatacaaactcaacgtggatcagaaggtcatccaggcg
ggcatgttcgaccagaagtcctcaggcaacgagcgccaagctttcctccaggccatttta
ctgactgaggagcagaatgaggtcgggtgtgaattattttgcaataagaagataaatgaa
gaagatgagatacccgatgatgaaactcttaaccagatgatagcccgcaatgaagacgaa
tttgagctcttcatgcgcattgacatggaccgacggcgggaggacgccaggaacccaaag
cgcaagcctcgcctcatggaggaggacgagttgccttcttggatcatcagagacgaagct
gaggtggaccgcctcacgtacgaagaggaggaggagaagatgttcggccgggggtctcgc
tgccgtcgggacgtagactacagcgacacgctcactgaaaaacagtggctgcgggccgtt
gaggatggaaacctggaagagatggaggaggagatccgcctgaagaagcgcaaacgcaag
agacgccaggacaaggactcgtcgagcagggatgaagggggctccaaggccaagaagaaa
cgtggacgcccaccagctgataaacactcccccaaccaccccaaagtcaccaagcaaatg
aacaccatcatcgatacggtcatcaactacagggatggggcagggagacaactgagcgag
gtcttcgtccagttgccttccaggaaagagctcccggaatattacgagctgatcagaaaa
cctgtggacttcaaaaagatcaaggatcgtgtgaggaaccataaatacaaaggagtggga
gacctagagagggatgtgatgctgctttgtcacaacgcccaaaccttcaacctggaggga
tcccagatatacgaggactccattgtccttcaatctgtgttcaagagtgcaagacagaag
attgccaaggatgaagagagtgaagatgacagcgatgaagatgatgatgatgatgatgat
gacgacgacgacgagtcagagactgaggctaagtctgtgcgggtcaagatcaagcggaag
aaggaggcgcgcagccatggcaaaggcaagaagaagcagagccgagggaaggccaagccc
gtggtcagcgatgacgacagcgacgaagacccggatgacaatgaccagtcagacaagagt
gacgatgactga
DBGET
integrated database retrieval system
