Gymnodraco acuticeps: 117547329
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Entry
117547329 CDS
T09661
Symbol
wdr33
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117547329 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117547329 (wdr33)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117547329 (wdr33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
ASA1
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_WDR75_1st
eIF2A
Beta-prop_Vps41
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
117547329
NCBI-ProteinID:
XP_034073847
UniProt:
A0A6P8VA02
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MATDIGSPQRFFHMPRFQHQAPRQVFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRHLENRLWQRDHRDFRALQPDAGCYNELVPPVGMVNNSMNAVTTKFVRTSTNKVKC
PVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFMRCHEERIL
RGHGADVKCVDWHPSKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWN
AGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGMEYDDVDMNSVASIPGMGIPDQLKAAMEQEQSSKEAPEVEMSIPGLDWGMDEV
MGKDSKKVPQKKVPYAKPIPAQFQQAWADNKVPMMPPGGDKERKGDPSDPELGFNPQLEG
TFTRSLVISTLNTVRRVLHNRHGVKKECGKYFDQTGTWGPPQGSMPPFSGPGGPGGPMPP
GQQGFPPNMPPQQMPNNMGPPXQPPFMPPVQMVPPSGPQAHQGPPSGHWGPPYMQRNNPG
PPRNMGPQGPHGMGPEGMQGPHGGMMGPPPRGMGPRDPQGPPTSGGGPPPRTQNKLWDGQ
HAGAPREGCTGHQETCSGPPGTCKDHMETCRGPPGNMQGPRGNMQGPPGNMQGPQGNMQG
PPGNMQGPPGNMQGPPGNMQGPSGNMQGPSGNMQGPSGNMQGPPGNMQGASYMQNSGPMM
HGMGSQGSNNKDPRGPPPNHHMGPPERQGGGQDQGSGPYWGEQQXGRRGPQDFEGGQDFH
SRAEEGWRPGYRGGHRGGGGNWGSEERFPGGEFRGRRDDRFRGSGRPGARGFPEEFSGSE
EGFEGPEDGSRGWDPGARGGGPREAPRGAGAGAGAGGGGGGHEGYHEGQMHDGSSPVGRS
SSLQGMDMASLPPRKRPWQEGPGTAEREAPGPEGGRPPQREDGGYGVRGGRGGWGPGGPA
PRRGGPAPRGPPRGGRSR
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggacatcggttccccgcagcgcttcttccacatgccgcgcttccagcaccag
gctccgcggcaggtgttctacaagaggccggacttcgcccagcagcaggcgatgcagcag
ctcaccttcgacgggaagcgcatgaggaaggctgtgaaccgcaagaccatcgactacaac
ccctctgtcatcagacacctggagaaccgcctgtggcagcgcgaccacagagacttcagg
gcgctgcagccggacgctggctgttacaacgagctggttcctcctgtggggatggtgaac
aactcgatgaacgccgtcaccaccaagtttgtccgaacctccaccaacaaagtgaagtgt
cccgtgtttgtgatcaggtggacccctgagggccgccggctcgtcaccggagcctccagc
ggggagttcaccctgtggaacggactcaccttcaacttcgagaccatcctccaggcccac
gacagccccgtgcgggcgatgacctggtctcataacgacatgtggatgctgacggcggat
cacggcggctacgtgaagtactggcagtccaacatgaacaacgtgaagatgttccaggct
cacaaggaggccattagagaagccagtttttctcccacagataataagtttgcgacgtgc
tctgacgacggcacggtgaggatctgggacttcatgcgctgccacgaggagaggatcctc
cgaggtcacggtgcagatgtgaagtgcgtggactggcacccctccaaaggcctggtggtc
tccggcagcaaagacagccagcagccgatcaagttctgggacccgaagaccgggcagagc
ctggccacgctccacgcccacaagaacacggtgatggaggtgaagtggaacctgaacggg
aactggctgctgacggcctccagagaccacctgtgcaaactgttcgacatccgcaacctg
aaggaggagctgcaggtgttcaggggccacaagaaggaggccacagccgtggcctggcac
ccggtccacgagggtctgttcgccagcggaggctctgacggctctctgctcttctggaac
gccggggtggagaaggaggtgggggggatggagatggctcacgaggggatgatctggagt
ctggcctggcatcctctgggtcacatcctgtgttctggatccaacgaccacaccagtaag
ttctggaccaggaaccgacccggggataagatgcgggaccgctacaacctgaacctgctg
cccggcatgtcagaggacggcatggagtacgatgacgtggacatgaacagcgtggcctcc
atccccggcatggggatccccgaccagctgaaggccgccatggagcaggagcagagcagt
aaagaggcccccgaggtggagatgtccatcccgggtctggactggggaatggacgaggtg
atgggcaaggacagcaagaaggtcccgcagaagaaggtcccgtacgccaagcccatccct
gcgcagttccaacaggcctgggcagacaacaaagttcccatgatgccccctggtggagac
aaagagaggaagggagatccgtccgacccggagctgggcttcaacccccagctggagggt
acgttcacacgctcattagtcatatctacactgaacaccgtcagaagagtcctacacaac
agacatggcgtcaaaaaggagtgtgggaaatatttcgaccagacgggaacatggggcccc
cctcagggctcgatgccccccttctctggccctggaggccccgggggcccgatgcctcct
ggccagcagggctttccccccaacatgcctcctcagcagatgcccaacaacatgggcccc
ccantgcagcctcccttcatgccccccgtacagatggtgcccccctctggaccccaggct
caccagggaccaccatcagggcattggggccccccgtacatgcagagaaacaaccctggc
cctcccaggaacatgggaccccaggggcctcacggtatgggaccagaggggatgcagggg
ccccatggagggatgatgggcccccctcctcgaggaatggggccaagagaccctcaggga
cctccaacctcagggggggggcccccacccaggacacaaaacaaactatgggatgggcaa
catgcaggggccccccgggagggatgcacgggccaccaggaaacatgcagtgggccccca
ggtacatgcaaggaccacatggaaacatgcaggggcccccctggtaacatgcaggggccc
cgtggaaacatgcagggacccccaggaaacatgcaggggccccaaggaaacatgcagggg
cccccaggcaacatgcaaggacccccagggaacatgcaaggacccccagggaacatgcaa
gggccctcagggaacatgcaggggccctcagggaacatgcagggaccctcagggaacatg
cagggacccccagggaacatgcagggggcctcatacatgcagaactcggggcccatgatg
cacgggatgggttctcaggggtccaacaacaaagatccccgagggcccccgcccaaccac
cacatgggcccccccgagagacaggggggggggcaggaccagggctcgggcccctactgg
ggcgagcagcagnngggccgccgggggccacaggacttcgaagggggacaggacttccac
agcagagcggaggagggctggaggccggggtaccgggggggccacagagggggggggggc
aactggggctccgaagagaggttccccggtggggagttccggggccgaagggacgacagg
ttcagaggaagcgggcggcccggcgctcggggtttccctgaggagttcagcgggtcggag
gagggcttcgaggggccggaagacgggagccgaggctgggaccccggggcccgagggggg
ggcccgagggaggccccccgaggagcaggagcaggagcaggagcaggaggaggaggagga
ggtcacgaggggtatcatgagggccagatgcatgatgggtcgtctccggtggggcgctcc
tcctccctgcagggcatggacatggcctcgctgcctccccgcaagagaccctggcaggag
gggccggggaccgcagagagggaggccccggggcccgaaggagggcgccccccccagagg
gaggacggggggtacggtgttcgggggggtcgaggaggctggggccccggaggccccgcc
ccccggagaggaggccccgcccccagaggaccaccgagggggggccgtagccggtag
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integrated database retrieval system
