Gymnodraco acuticeps: 117547470
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Entry
117547470 CDS
T09661
Name
(RefSeq) LIM domain only protein 7-like isoform X1
KO
K06084
F-box protein 20
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04517
IgSF CAM signaling
gacu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117547470
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117547470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gacu04121
]
117547470
Ubiquitin system [BR:
gacu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117547470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117547470
NCBI-ProteinID:
XP_034074136
UniProt:
A0A6P8UBB8
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MGPHYKTQISLDSFDSLDSRVLHQNNEGWGSDAEAEEVFKMETTQPSTQQNKGYIPHPLL
RRKQGREESGRGCAGPIARAYQIQVRPERPVQVNPGWIWSKSLSDIPMVYPVRKLPGEHT
IYDEDLDTNMANEWNQEDKRRCSVAAKDSEAQWQDDFSKWKNRRTSTTSERRKSLDREHV
ITQMANGAGITFEKNKAQGGLLKSDQQSPHRHFPAPRPYSTSLHSKSLSSDLRPHTRALL
ARSYATEPPFSPQAPLSSQNSPHTQGSSVGAMPASDANTLREETHFASLASHGAEVTTPS
LDGPFSFQAQVKVQESPAPVQPTSEEAQSVNVLKKQISTLVTTIQPKVTTKSTKTREPTE
SMSSHKEPLCGNPKVPAFCTDQMGVDGLEDLSTKNQKSQEESQKMSWEPAVEHGSGQQAA
AGYSFMSKTGSWSGSASLPRGYRRSEGSSRLSSAITARPFGTKSRVSSLPRLFNVDNNQG
LLMDSEKEESLSPTNKSSLKRQTATTHLKVQDVTVRQKKANQAQQSGPEQVEEELKGATL
SSQSSFQTIGYHHQQNTQTQLVPQPHSSLQTQNNTGSTLQSSASIDLPKVDHSDMRVSLT
LKPNSRPDFGFQTHWDSRGARVKCIQPGSPAEQCQLCVDDEIVAVNGVAVAHLNYNQWKD
KMTSSLQNGRLTMDIRRYGNKDWSTSEESHHKQPGRSRMTLNLTSAGSSLIGCLDRHAIS
GTSSETPVRKFNEQTDDVLQSKVIHGEPADSHKTAGSKDYNIISRKNQKRREEFFKQKGG
SESAISDLQVPSLSPSSSSWSWDREGDRRRQEKWQEEQELLLQEQYRRDQERLESEWRRA
QQDAKGEVRWKPGQKTFEMTNGGESTASPQLHVNGFTKKNIQAEKSSDRDELKDEGTTPQ
SNAQGEQRDKISGPAWPEDSCGFLKLSLAHRAKSFSTPALASTHKQTRGPGDERKRTGQS
ASNAEKERQLILQEMKKRTLLLTDNSWIRQRTSSFYKEPIYVGVPMKRYESLDDLDTLRQ
SHPSVATFSYPRPQSAAAGYCVPSRNSSSRYSTGSILSQKSTFDSSHHPSVWAATDISEE
VRLESRFESETGSPTVSRAISNSSLLVHPPYDQDGILQITD
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgcactataagactcagatttctttggacagcttcgactctctggattctcga
gtcctccaccaaaacaatgaaggttggggaagtgacgcagaagctgaggaggtgttcaag
atggagaccacacagccctccacccagcaaaacaaaggttatatcccacatccactccta
cggagaaaacaaggacgggaggagagtggaaggggctgcgcaggtccaattgccagagca
tatcaaatccaggtcagacctgagagaccagttcaggtcaaccctggttggatttggagc
aaatccctcagtgacatcccgatggtttaccctgtgcgtaagcttcctggtgagcacacc
atctatgatgaagacctggacacgaacatggccaatgagtggaatcaagaagacaaacgg
aggtgtagtgttgctgccaaggacagtgaagcacagtggcaagatgacttttcaaagtgg
aagaatcgtcgcacgagcacaacgtctgaacgcaggaagtctctagacagagagcatgtc
attactcaaatggccaatggggctgggattacatttgagaagaacaaagcacaaggtgga
ctgctaaaaagcgaccagcagtcccctcacaggcatttccctgctcctcgtccttacagc
acctctctccattcaaaatccttgagctctgatctccggccacatactcgggctctgctg
gcccgcagttacgccacagagccacctttcagcccccaggctccacttagctcccagaac
tcaccccacacccagggatcttctgttggagccatgcctgcctctgatgcaaacaccctg
agagaggagactcactttgcctccttggcttcacacggagcagaagtcaccactccttct
ctggacggccctttcagcttccaggcccaagtcaaagtacaggaaagcccagctcctgtc
cagcccacttctgaagaggcccaatcagtaaatgttttaaaaaaacaaatctccactctg
gtcacaaccatacagccaaaggtgaccacgaagtcaacgaaaaccagggaacctacagaa
tccatgtcgagtcacaaggagccattatgtggtaatccaaaagtccctgctttttgcact
gatcagatgggagttgatggtctggaggacttgtccacaaaaaaccaaaagtcccaggaa
gagagccagaagatgtcctgggaaccagctgtggaacatggcagtggtcagcaggctgcg
gctggctacagctttatgtccaaaactgggtcctggtccggctctgccagcctccctcgt
ggttaccggaggtccgagggctcgtctcgtctctcctctgcaatcacagccaggcccttt
gggaccaagtccagggtgtcctctctgccgagactgttcaacgtagacaacaaccaaggt
ctgctgatggatagtgagaaagaggaatctctttctcccaccaacaaatcttctcttaaa
agacagactgcgaccacccatttgaaggttcaggatgttacagtcagacaaaagaaagct
aaccaggcgcagcagagtggtccagagcaggtggaggaggagctgaaaggtgccactctc
tccagtcagagctccttccagaccattggataccaccatcaacagaacacacaaacccag
ctagtaccgcagcctcattcaagcctgcagacccaaaacaacacaggctccactctccaa
tctagtgcaagcattgacctcccaaaggtggatcacagtgacatgagagtcagcctgact
ctcaaacccaacagtagaccagactttggtttccagacgcattgggactctagaggggcg
agagtcaaatgcattcagcctggcagtccggcggagcagtgccagctgtgtgtggacgat
gaaattgtggctgttaatggagttgcggtggcacacttgaactacaaccagtggaaggat
aaaatgacatcttccctgcaaaacggccgtctgaccatggacataaggcgctacggcaac
aaggattggagcaccagtgaggagagtcatcacaagcagccaggccgcagcaggatgacc
ctcaatctgacttctgcagggtcctctctgataggttgccttgatcgccatgccatcagt
ggtacctcttcagaaaccccagtcaggaaattcaatgagcagacagacgatgttttacaa
agtaaagtcattcacggagagcctgctgacagccacaagacagcaggaagtaaagattat
aatattattagtaggaaaaatcagaaaaggagggaagagtttttcaaacagaaaggaggg
tcagaatcggcaatatctgatctccaggtgccatccctcagcccctcctcatccagctgg
tcgtgggaccgtgagggggatcggaggcgtcaggagaagtggcaggaagaacaggagctc
ctcctacaggagcaatacaggcgggatcaggagaggcttgagtcagagtggcggagggca
cagcaagatgcaaagggggaggttcgctggaagccagggcaaaaaacatttgagatgacc
aatggtggtgagagcactgccagcccccaactccatgtgaatggatttacaaagaaaaac
atacaagcagagaagagctctgaccgagatgagctgaaagatgaagggaccacacctcaa
agtaatgcacaaggagagcagcgtgacaagatatctggaccagcctggcctgaggactca
tgtggctttcttaagctgtcccttgcacacagggcaaaatccttctctaccccggcatta
gctagcacccacaaacagacaagaggtccaggtgatgagaggaaaagaacaggacagtct
gcgtctaacgctgagaaagaaaggcagctgattttgcaggagatgaagaaaaggactctt
cttctgactgacaacagttggattcggcagcgcaccagcagcttttacaaagagcctatc
tatgttggggttcccatgaagaggtatgagtctctggacgacctggatactctccgtcag
tcccacccctcggtcgctacctttagttaccctcgtccacagtcagcggctgcaggctac
tgtgtccccagcaggaactcctcctctcgctacagcactggatcaatactatcccagaaa
agtacatttgattcctcccatcaccccagtgtgtgggctgccaccgacatctcggaggaa
gtgagactggagtccaggttcgaatccgaaacaggaagccccactgtgagccgtgctatt
tccaactcaagtctgctggtccaccctccatatgaccaagacggcatactccagatcaca
gattaa
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