Gymnodraco acuticeps: 117548077
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Entry
117548077 CDS
T09661
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117548077
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gacu01009
]
117548077
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gacu04515
]
117548077
Protein phosphatases and associated proteins [BR:
gacu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117548077
Cell adhesion molecules [BR:
gacu04515
]
Cadherins
Protocadherins
117548077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Neur_chan_memb
MAP17
Motif
Other DBs
NCBI-GeneID:
117548077
NCBI-ProteinID:
XP_034074968
UniProt:
A0A6P8UDD7
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MDLKDYYLLGALFACLWLDPSIAQELIYPIREELQENVLIGNIPKDLNISHTNAATGASA
NLVYRLVSKAGDNPLVRVLSSTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
INGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVT
VTDVNDNRPVFKEGQIDVHIPENSAIGTSVVQLQASDADIGANAEIRYVFGTQVSAATKR
LFALNTTSGLITVQRLLDREEMAIHKLSVLASDGSSSPARATVTINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN
NKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
ITARDNGTPPLQTQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVSLSILNDNENFILDPYSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
NKGLFRIDPVTGNITLEEKPALTDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
TLIYDLIRRTMETPIDRNIGESSETYQSGDYLTIMIAFVTGALVVIIVIFVTVLLRCRHA
SRFKAAQRKKQGAEWMSPNTENKQNKKKKRKKRKSPKSSLLNFVTIEGNKPDDPAHEPIN
GTISLPTELEEQGIGRFEWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKAPMHTRQQGTLTRART
ELNPEYLDLRPRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGSLL
TQPLPLVQAQDDFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD
NCWMPPTLGTYQQPKSPVSSFGSQREWGPKEKLLNGHTLTRTWKNDSGRSDPFGDRKPFG
SGEGHFTSGGMADIPLVSLKSCQPASCPDSPKDQQL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaaagactattacctgttgggtgccctgttcgcctgcttatggctagatcct
tcaatagcccaagagctaatataccccatcagagaggagttgcaagaaaatgtcctcatt
ggaaacataccaaaggacctaaacatttcccatacaaatgctgccactggagcaagtgct
aatcttgtgtaccggctcgtctccaaagcaggagataaccctctggtgcgtgttctgagc
agcactggcgagatattcacaacatcaaaccgaatcgacagggagaagttgtgccctggt
ccctcgtttgaggacagcgagtgctcctttgaaattgaagtggtcatcctccctaatgat
tatttcaggctgattaaaatcaaaataattgtcaaagacacaaatgataatgcccccatg
ttcccgtcccctgtgatcaacatctccatccctgagaacacgctcattaacagccgattt
gccattccttctgccactgacccagacactggccctaacagtgtccacaaatacgagctc
atcaacgggcaaagtgcctttggcttagacatagtggaaacgcctgagggggagaagtgg
ccccagctcattgtgcagcagaatctggacagagagcagaaggatacatatgtgatgaag
atcaaagtggaggatggtggcagtccacagaaatccagcactgcaattctccaagttaca
gtaacggatgtcaatgataacagaccggtgtttaaagagggtcagatagatgtgcacata
ccagaaaactccgctattggcacatctgttgtgcagctccaggcatcagatgcagacata
ggggcgaatgcagaaatacgttatgtatttgggactcaggtgtcagctgctacgaaaaga
ctctttgcattaaatacaacatctggcctaattacagtgcagagacttctcgacagagag
gagatggctattcacaagctttctgttttagccagtgatggcagctctagtcccgcaaga
gctactgttactataaatgtgactgatgtgaatgacaatccacctaatatagacctgaga
tacataatcagtcccattaacggcactgttttcctctctgagaaggatcccatcaatacc
aagatagctctcatcacagtgtcagacaaagacactgacatcaatggcaaggtcatttgt
ttcattgagaaagatgtgcccttccatctaaaggctgtgtacgacaaccagtatctgtta
gagacatctgctctgcttgactacgaaggcactaaggagtataactttaaaatcgtggct
tctgactctggaaaacccagcttgaatcagactgccttggtaagagtgaggctggaggat
gagaatgacaacccgcctatttttactcagccagttattgagctagctgttatggaaaac
aacaagcgcgacctgttcctcacgactctcagtgccacagatgaggacagtgggaaaaac
gcagagatagtttatcagctgggaccaaatgcatccttctttgatctcgaccgaaaaact
ggggtcctgactgcatccagggtctttgaccgggaggatcaggataggttcctcttcact
ataacggcaagagataacgggacaccccctttgcagacgcaggcggctgttattgtaact
gtgctggatgaaaatgataacaacccaaagttcacacataaccactttcagttctttgtg
tctgagaatcttccaaaatacagcacagttggggtgataactgtcacagattcagatgcc
ggagaaaatgctgcggtttctctttctatactgaatgacaatgagaactttatcctggat
ccttactctggagtgattaaatctaatgtgtcattcgatagggagcaacagagctcctac
acttttgatgtcagggctgtggacagtggcaggcctccttgctcctcagccgccaaggtg
accataaatgtaatcgatgtgaacgacaacacccccattgtcatctatcccccctccaat
acatctttcaagctcgtacctctctcctctatcccaggatctgtggtagcagaagtgttt
gctgtagacggtgatacaggaatgaatgcagaactgaaatacaccattgtgagtggaaac
aacaaaggacttttcagaattgaccctgtcacaggcaatattactctggaggaaaaacca
gctttgactgacataggcttacacagattagtggtcaatatcagtgacctgggatatcct
aaatctctccatacgcttgtgctggtatttctgtatgtcaatgacactgtgggcaactcg
actctcatctatgatctcatccgacgcaccatggagactccaattgaccgtaacattggt
gaaagcagtgaaacgtatcaaagcggtgactatttaactataatgatagcctttgtaact
ggggcattggtagtgattattgtcatctttgtcactgtgcttctgcgctgccgccatgct
tccagattcaaagctgcacagcggaaaaaacagggggctgagtggatgtcacccaacact
gagaacaagcagaacaaaaagaaaaagcgcaagaaaaggaagtccccaaaaagctctctg
ctcaactttgtcaccattgaggggaacaagcctgacgatcctgctcacgagccaatcaac
ggaaccatcagcctgcccaccgagctggaagagcaagggattggacgctttgaatggaat
gccacacccacaacaaccttcaaacccagcagcccagacctggcccggcactacaagtct
gcctcgccgcaatcggccttccacctcaaggccgacacgccagtctcagtgaagaagcat
cacgtgattcaggagctcccattggataacacatttgttgggggctgtgacaccctttcc
aagaggtcctccacgagctctgaccacttcagtgcctcggagtgcagctcccaaggaggg
ttcaagacgaaggcgcccatgcacaccagacagcagggaacattaactcgtgcccgaact
gaactgaaccctgagtatctggacctccgtccgcgagctgagctgaaccctgaatattgg
accccttgcacccctttatcgcagcggcgcgtcacgtttcacctgccggatggctctcag
gagagctgcagtgacagcggtctgggggaccacgagcctgttggcagtggctccctcctc
acacaacctctccctctggtgcaggcgcaggacgacttctacgagcaggcctcccccgat
aagaggactgaagctgacggcaactccgatcccaactctgatggccccctgggacctcgt
ggtctagtggaagctacagagatgtgcacacaagaatgcctcgtcctgggacattcagac
aactgctggatgcctccgactttgggaacataccagcagccaaaatcacctgtgtctagc
tttgggtctcagagggagtggggtcccaaggaaaaacttctcaatggacatactctgacc
agaacctggaaaaatgatagtgggcggtcagatccttttggtgataggaagccgtttggg
agtggagagggacacttcaccagcggtggcatggctgatattccactggtgagtctgaag
tcctgccagccagcgtcctgccccgacagccccaaggaccagcagctataa
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