Gymnodraco acuticeps: 117548170
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Entry
117548170 CDS
T09661
Symbol
pcdh17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gacu04515
]
117548170 (pcdh17)
Cell adhesion molecules [BR:
gacu04515
]
Cadherins
Protocadherins
117548170 (pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
117548170
NCBI-ProteinID:
XP_034075120
UniProt:
A0A6P8US79
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MYLSIFFFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDARLGLEQVGPGQGKKANFR
VLENSAPHLIDVDPQSGLLYTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQDI
NDNSPAFPSDQIDIEISENAMPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVKS
RGDGTKFPELVIQRPLDREERSHHTLILSATDGGEYPRSGNMQINVKVIDSNDNSPVFDQ
PSYIVEIPENSPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSIDSRTGVIKI
QGEIDYEESPVIEIDVQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEAA
PPATVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREAQDEYNV
TIVAKDNGIPPLNSTKSFTVKILDENDNVPRFTKSVYLLQIPENNIPGEYLGSVLAHDPD
LGQNGTVYYSIMNSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLARDAGSP
HLESNATVRISVLDVNDNIPVIVLPLLLNDTAEIHVPRNVGVGYIVTTVRAVDNDYGESG
RLTYEISDGNEEHLFEIDPVTGEVRTAHPFWDDVNPIVELIIRVSDHGKPTLTAAARLIV
KASNGRPPDGLPRTKDNQNWDMSLPLIVTLSIISIMLLAAMVTIAIKCKRENKEIRTYNC
RIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTRL
PLSSPRSEVMYLKPTANSLSVPQGHVGCHTSFTGPVTSTTDTPTNRMSIIQTDNFPTEPN
YMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKATG
VKPPPLEQDEDCVNCTEECRVLGHSDRCWMPQFPAGGNQAEGVDYRNNMFVPAGMETVPE
AETYETVNPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPSASGSPTKSC
STMSPCNSVKSPADGAEGNPPPATCSGHYGPPDGQYLSPTKQSRDQGVYPPLPPMDPVAK
VLAEARSRISQEATGEMECVLEQVEPDASRDRMDADQVVRDIDKLLQDCRGSEATATLRK
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttctattttctttttcctcctcctatgggctcaagccctgacattgaagaac
ttaaattactctgtcccggaggaacagggtccagggacagtgattgggaacatagccaaa
gatgccagactcggactcgaacaggttgggccgggacagggtaagaaagccaacttcagg
gttcttgaaaactcagcaccgcatctcatcgacgtggaccctcaaagcggactgctgtac
acaaagcaacgcattgacagggaaaccttgtgtaagagaaaccccaagtgccagctctcc
atggaggtgtttgccaatgacaaggagatctgcatgatcaaaatagatatccaggacatt
aacgacaactcacccgctttcccctcggatcagattgatattgaaatttctgaaaatgca
atgccagggacacgttttcccctgaccagcgcgcatgacccagatgcaggggagaacggc
ctgaaaacctatcaaataacacgcgatgactacaatctattttccttagaggtaaaatcc
cgtggcgacgggactaaatttccagaattagttattcaacgaccattggaccgcgaagaa
cgaagccatcacaccctcattttgtcagccacggatgggggggaatatcctaggtcaggt
aacatgcagataaatgttaaagttattgattccaatgataacagccctgtgtttgatcaa
ccatcgtatattgtggaaattcctgaaaattctcctcctggtaaagtgctgatcgattta
aatgccactgatcctgatgagggcaacaatggacaagtagtctattcttttagtggctat
gccccagagagaatccgggagctcttttccatagattcaagaacaggggtcataaagatt
cagggcgaaattgactatgaagagagcccagtcattgagattgacgtccaggcaaaggat
ctaggtcccaatccaatcccaggccattgtaaagtcacagttaaagtgcttgacaggaat
gataactggccatctataggctttgtgtctgtgagacagggagccatcagtgaggcagca
cctccagccactgtcattgctctggtccgtgtcacagacaaggactcaggcaggaatggg
cagcttcagtgcagagtgctgggtaatgtcccttttaaacttgaagagaactatgataac
ttctatactgtagtaacagacaggcccttggacagagaggcgcaagatgagtataatgtc
accattgtggccaaagacaacggcattcctcctctaaactccacaaaatccttcaccgta
aagattctggatgagaatgacaatgttcctcgctttacgaagtcagtttaccttcttcaa
atacccgagaacaacattcctggggagtacctaggttcagttttggcgcatgacccggac
cttggccaaaatggcacagtatactacagcataatgaactccaatgtgagtgggggtgat
gtcaacacctatgttaatgtgaatgctgctaatggagccatatatgctgtgagatccttt
aactatgagcaaatcaagtattttgactttaaggttcttgctagagatgcaggatcccca
cacctggagagcaatgctacagtccgcatcagtgttctcgatgtcaatgacaacatccct
gtcattgttctgcccctacttctaaatgatacggctgaaatccatgtgccgcgtaatgtt
ggtgtgggctacattgtcaccacagtaagggccgtggataatgactatggtgagagcggg
aggctcacttatgagatctcggatggcaatgaggagcacctctttgagattgatccagtg
actggggaggttcgaacagcccacccattctgggacgatgtgaaccccattgtggagctg
atcattcgagtatcagaccatggcaagccgaccctgactgctgccgccaggctcatcgtc
aaggcctctaacggacgtccccctgatggattgccacgcacaaaggacaatcagaactgg
gacatgtccctgcctcttattgtaactctaagcatcatatccatcatgcttctggctgca
atggtgaccatagcaatcaagtgcaagcgagaaaacaaggagatccgtacatataattgt
cgcattgcagagtactcgcaccctcagctggggaaaggcaagaagaagaagattaacaag
aacgacatcatgctggtgcagagcgaggtggaggagcgggatgccatgaatgtgatgaat
gtggtaagcagcccttccttggccacctctcctatgtactttgactaccagacacgactg
ccactcagctcaccaaggtcagaggtcatgtacctcaagcccactgccaatagcctcagc
gtgccccaaggccacgtgggatgccacaccagcttcacaggcccagtcaccagcactaca
gatacacctactaaccgcatgtccatcatacagacggacaatttccccactgagcctaat
tatatgggtagcagacaacagtttgttcaaagcagttcaacctttaaagacccagagcga
gcaagcctcagagacagtggtcatggtgacagtgaccaggctgacagtgaccaggacacc
aacaaaggctcctgctgtgacatgtctgcaaaagaagccctcaagttgaaggctacagga
gtgaaaccaccgcctttggagcaagatgaggactgtgtgaattgtacagaagagtgccgg
gtactgggccattcggaccgttgctggatgccccagttccccgctggaggaaaccaggcc
gagggagtcgactaccgcaacaatatgttcgtgccggcagggatggagactgtgcctgag
gcagagacctacgagactgtcaaccccaatggcaagaagacgttctgtacatttggaaaa
gaaaggcgtgaccacacaatcctagtggccaacgttaagccctacttgaaggcaaaacgt
gccctaagtccactgctccaagaggtaccctcagcctctggtagtcctaccaagagctgc
tcaaccatgtctccctgcaattcagtcaaaagcccagctgacggagctgaaggcaaccct
ccccctgccacctgctcaggccactatgggcctcctgatggtcagtacctgtcaccaacc
aaacaaagcagagaccagggggtctacccaccattgcctcccatggacccagtggccaag
gtgcttgcagaagcccgctctaggatcagccaagaggcaacaggggaaatggagtgtgtg
ctggagcaggtggagcccgacgcaagccgtgacagaatggacgctgaccaggtggtcaga
gacatcgacaaactattgcaggactgcagaggaagtgaggccacagccacactcaggaag
tga
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