Gymnodraco acuticeps: 117549267
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Entry
117549267 CDS
T09661
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117549267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gacu03036
]
117549267
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
117549267
REST complex
117549267
Heterochromatin formation proteins
Other heterochromatin formation proteins
117549267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
117549267
NCBI-ProteinID:
XP_034076900
UniProt:
A0A6P8UWL1
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MKRRVEDQEPIFAPQQQQVRRPQVQGIADSFQHRALAPAPTVIEASADNMQPSTGIQYSL
PQGYQVPTLPQSTGGHGHGHGHNNTAPHVGPHAHSLAAQSQGPTVVQGHVHPPAPMTSTQ
GQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKG
HPDLIMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHGISVHNIPISGASSQPASHN
QHQSLPQAAPQTPTTTTTAPPVPTQPAPSKTSKPIQSPAHTPTSQPNPSIPSYASPRSPS
VQSHTPVSSTPSAGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKSFLEILHTYQKEQ
RNAKEAAGNYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSLLLCKAAPDRAES
VRNDHGGTVKRPLLSSKQRLSQNGLPIRRPPGGGPTPPVKKKPKILGKDHGLTEAGKHST
STETMFFEKVKKALRSSEAYDNFLRCLHIFNQEVISRAELVQLVIPFLGKFPELFTWFKN
FLGYRESFHGESSHTESLPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTP
LCREVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLEANLSTIRALEA
VQRKISRMSAEEQLRFKMDNTMGGSSEVIHRKAIQRIYGDKANDIIDGLKKNPAVSVPIV
LKRLKMKEDEWRDAQRGFNKIWRDQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIEM
LYDDRQERASEEMETATLPVTGPHLTQTMKTARSWRTLLALIIHHVKRQVGIQKEDKYKI
KQIIHHFIPDLLFARRGELSDVEEEEEEEEEEEDMEMDSEGPKKHNGLPGSSPSKSKLLF
SNTAAQKLRGTDEAYSLLFVNNYWYIFLRLHHILCTRLLRIYGQAEKQIEEDAREREWER
EVLGFKREKNENPAIQLKMKEPLDVDVEDYYSVFLEMVRNLLDGNMEPIQYEDSLREMFT
IHAYIAFTMDKLIQSIVRQLQHLVTDDVCARVTDLYLSESANKSSGGPLSTQTSRATAEG
SYQRKAEQLMTDENCFKLMFVKSRGSVSLAMELLDTEEDNSDEPAEAERWSDYVGRYLNS
DSASPELREHLSQTPVFLPRNLRRIRKCQRGWEQLQQERMNTVPSDKPQDGSSDIKMECM
FKLNSYKMVYVCKSEDYMYRHTALTRAHQSQQRVNTRLHRRFHTWLDSWAKEHVTSDMAA
DNRKWLMGERREGLLPCTTTCHLKVLHYININKFRVKYRTL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcgtgtggaggaccaggaaccgatatttgcgccccagcaacagcaagtacgt
cgtccccaagttcaaggcattgcagacagcttccagcaccgggccctcgccccggcccct
actgtgatagaggcatctgcagacaacatgcagccatccaccggcatccagtactctctc
ccccaaggctaccaggtgccaacattgcctcagagcacaggtggacatggacacggacat
ggacataacaacactgcccctcatgttggtccccatgcacacagcctggcagctcagtcc
cagggacccacagtggtccagggtcacgtccatccacctgcacccatgacttctacccaa
ggacagcagtttcagcgactaaaggtggaagatgccttgtcctatctggatcaagtgaag
ctgcagtttgggaatcagccacaagtttacaatgattttcttgatattatgaaagagttc
aagtcacagagcatagacactcctggagtcattaaccgcgtgtcccagctcttcaagggc
cacccagacctcatcatgggttttaacaccttcttgccacccggatataaaattgaggtt
caaaccaacgatctagtcaacgtaaccacgccaggtcagatccactacatcacgcctcat
ggtatttctgttcataacatccctataagtggagcgtccagccaacctgcaagccacaac
cagcaccagagtctgccacaggctgccccccaaacccccaccacaaccaccactgcccca
cctgtccccacccaaccggccccgagtaaaaccagcaagccaattcagtctccagcccac
acacccaccagccagcccaacccatccatcccttcctacgcctcaccgcgctcaccttca
gttcagtcccacactcctgtgagcagcacaccgtccgcggggccacctctccaaaacaac
cagcctgtggagttcaaccacgctataaattatgtcaacaagatcaagaaccgcttccag
ggccagccggacatctacaaatccttcctggaaatacttcacacataccagaaggaacaa
cgaaacgctaaagaggcagcaggtaactataccccagcactgactgagcaggaggtctac
actcaggtggcgagactcttcaagaaccaggaggacctgctctcagagtttggacagttc
ctgcccgatgcaaacagctcgctgctgctgtgtaaggctgcaccagacagagcggagtcg
gtgcgcaatgatcatggcggcacagtgaagagaccgttactgagcagcaaacagagactg
agccaaaatggcctgcccatcaggagacctcctggagggggacccacgccccctgttaag
aaaaagcccaagattttggggaaggaccatggcttgactgaagccggcaaacacagcacc
agcactgaaaccatgttctttgagaaggttaagaaagctctgcggagctctgaggcgtac
gacaacttcctgcggtgtcttcacattttcaatcaggaagtgatctctcgggctgagctt
gtccagttggtcatcccatttcttggaaaattcccagagctttttacatggttcaaaaac
ttcctgggctaccgggagtcgtttcacggggagtccagccacacagagagtttacctaag
gagcgtgccacagagggcatcgccatggagattgactacgcgtcctgcaagaggctgggg
tccagctacagagccctgcccaagagctaccagcagcccaagtgcacaggaaggacgccg
ctgtgtagagaggtccttaatgacacttgggtgtcgtttccatcgtggtctgaagattct
acatttgtgagctccaagaagactcaatatgaggagcacatttacagatgtgaggatgag
cgctttgagctggatgtggtgttggaagccaacctctccacgatacgagccctggaggcg
gtgcagcggaagatttctcgcatgtccgctgaggagcaactgcgctttaagatggacaac
acaatgggtggatcctcagaggtcatccatcgcaaggctattcagaggatatatggagac
aaggccaacgacatcatcgacgggctcaagaagaacccagctgtgtctgttcccatagtg
ctgaaaagattaaaaatgaaggaggacgagtggagagacgcccagagaggcttcaacaaa
atctggcgggatcagaatgaaaagtattacctaaagtcactcgaccaccagggcatcaac
ttcaagcagaatgacaccaaagtgttgcgttcaaagaccttactgaatgaaattgaaatg
ctatatgatgaccgccaggagcgagcgtcagaggagatggaaactgccacgctgccagta
actggccctcacctgacccagactatgaagacagccagatcctggaggacgctgcttgcc
ctcatcatccaccacgtcaaaagacaggtgggcatccagaaagaagacaagtacaagatc
aagcagatcatccaccacttcatcccggacctcctgttcgcacggagaggggagctctct
gatgtcgaggaggaggaagaagaggaggaggaagaagaagacatggagatggattcagag
ggccccaagaagcacaatggcctgccaggcagcagcccgtcaaagtccaaactcctcttc
agcaacacggcagctcagaagctgcggggcacagacgaagcctacagcctgttgttcgtg
aacaactactggtacatcttccttcgtcttcatcacatcctctgtacgcgtttgctacgc
atctacgggcaggctgagaaacagatagaggaggacgccagggagcgagagtgggaaaga
gaagtgttgggcttcaaaagggaaaaaaatgaaaacccagcaatccaactgaagatgaag
gagccactggatgttgatgttgaggactattactcggtgttcctggaaatggtgcgtaat
cttctggatgggaacatggagccgattcagtacgaggactccctgagggaaatgtttact
atccatgcctacattgccttcaccatggacaaactcatccagagcatcgtccggcagctc
cagcacctcgtcactgatgatgtatgtgcacgtgtaacggacctgtacctgagcgaaagt
gccaacaaatcctcgggggggccactgtccacgcagacgtccagggccacagcagagggc
tcctaccagcgcaaagcagagcagctaatgacggatgaaaactgcttcaagttgatgttt
gtaaagagccgaggatctgtcagtctggccatggagctgctggacacggaagaggacaac
tctgatgagccagcggaggcagagaggtggtcagactacgtgggcagatacctgaactca
gactctgcgtcccctgagctgcgtgagcatctgtcccagacgccggtgttcctccccagg
aatttgagacgcataaggaaatgccagagaggatgggagcagctgcagcaggagagaatg
aacacggtcccctcggacaagcctcaggacggcagcagcgacataaagatggagtgcatg
ttcaagctcaactcctacaagatggtctatgtctgcaagtcagaagactatatgtacagg
cacaccgcactcacacgcgctcatcagtcccaacagcgggtcaacactcgcctgcacaga
cgctttcatacctggctggactcctgggccaaagagcatgtgaccagtgacatggctgcc
gacaaccgcaagtggctgatgggagaaagaagagaaggcctgttgccctgcaccaccact
tgccaccttaaggtcctccattatatcaacattaacaagttccgtgtgaagtacagaaca
ctgtag
DBGET
integrated database retrieval system
