Gymnodraco acuticeps: 117549729
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Entry
117549729 CDS
T09661
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K07603
collagen type XVII alpha
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117549729
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
117549729
NCBI-ProteinID:
XP_034077703
UniProt:
A0A6P8UKW4
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MAPNLVNSQATAEAKDLSMSAGESGEKAASGSSGGILITSSSYNDAGSDGYGSSGTSRSG
QITSNSSNTTSSGGYNASGTSSSGQITSNSSNTTSSGGYNASGTSSSGRITSSSSSAASS
GGYGSGGTSSSGLTTSASSNATSSGGYGTSKAAGGISVTTLGASCAVSSGVGSSATSGGS
GAATKGAAGAVGFRATGKGSSGMSSGFVSGGRDGKRDGGLGAVTVSTVTKNSYSSGGSGE
AKRGSSSAVTYSPVPKEKKGTTTMAAAVSDVFYESSSTNSSPEYKRKEYGTSSLASSSAT
RGRTQSRESEIRARLQSASPPASWTELDDVKRLLRGNHSTSTSPTRSPNNTLPIPKKASV
ETRTMSDSATTGSANQMPEHYGSIWSGGGSSGYGYNTNPNNLSATSTHYSSGVQNNLTLS
SPSMNGGLSAGSTVPMYGLQNNLATTSPMAFSATGANTQTVYGVQKNVSGTVIGTTTVRP
SSPINDESPGKDFKFVLIEKENAPVKKETERLVMTKDTGKQFMSTAHATTSAFFSGDSLQ
REKQKLSSSTMEEGTDTKSATLKVATKDKATYAEISESDSVFSFCSCCSWWKWLLGLLLS
LLLLLGLLFGLIALGEQVKRLQNRVEALEAITGTASARSSRLSAASGINIIDPLDSTYIE
RSSAGSTLTRSDNGINLGAAGPAVGAGSGPGQDSAALQRTVQHLVRTELRSDALRDSLAY
SLKGERGDPGPKGDPGMLGQKGDGGFPGLPGPPGQLGHPGQDGPRGPKGSAGEQGSEGPP
GQRGRDGPMGSRGEAGPPGLGEKGDRGTQGEAGRPGLAGPPGPVGPKGSTGEQGTHGIPG
APGPKGFQGEAGAPGAPGDRGTPGISGIKGDPGERGARGISGEPGQPGPQGPGGPKGSKG
SGGEAGLNGLPGARGPPGIPGDVGPRGEPGAPGKIIASAGSNAVAIPGPPGPSGPPGPAG
THGLSGPIGPAGLPGRPGTKGDQGDQGDKGHKGDKGEQGKPGEPGTVTRSETPGTDKPSS
AASLPGPPGPPGHAGASGPPGPSGEGKQGPPGRRGPAGEPGVGLPGSPGDKGEPGSFVPT
SGTFFAGPPGPPGPLGPSGDRGPEGFQGEPGQPGLPGSPGSAGKPGHGQPGPKGPEGPPG
PEGPEGIDGHKGPPGPPGLSGPPGLSGSPGRDGSGPTDVGPYLAEYLQSSSFSPGAPGPP
GPPGAPGRDGTESGSPDVGQYIAEYIQSDGIRQYLAGPPGPPGPPGGPGSTGDGLVDDVA
NRVIAYVQSQGRGYDSSPGPPGPPGPPGSISINDVIDVLQREDVRRYVAGTPGPPGPPGA
PGQGSYGINTQEVAERVLTLLNDRQVLGVPGPPGTPGLPGDSYPVVGPQGPPGVPGIPGR
DGPPGPPGFSNDIRDYLHSVEFRGLPGPPGPPGPEAPPSVLHGLVSFAEYANREPPTAEQ
QQYINSDGMRGTMFGLPGAPGPPGPPGHKGEPGESGTRDSSLDTGDYSSMAVKVTDYIKS
HDLLRGVAGNSEHFVQGPPGPPGLPGMPGQSQLASSHENIMDVVEYIKSQGLLRDIDQNH
NERGIQGPRGPPGPPGLPGHSQLFGSQENVIDLVEYIKKNGAIVGPPGRPGQKGDIGFPG
PTGERGESTLTVKRRKRNVRV
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atggccccgaacttggtcaacagccaagcaacagccgaagcaaaggatctctctatgagc
gcaggagagtcaggtgagaaagctgcatcaggaagctccggaggaatcctgatcacatcc
agcagctacaacgacgctggctcagatggatacggctctagtggaacaagccgctcagga
cagatcacatccaacagctccaataccaccagttcaggtggatacaacgctagtggaaca
agcagctcaggacagatcacatccaacagctccaataccaccagttcaggtggatacaac
gctagtggaacaagcagctcaggccggatcacatccagcagctccagcgctgccagctcc
ggtgggtacggctcgggcggaacaagcagctcaggcttgaccacctctgccagctccaat
gccaccagctctggtggatatggaaccagcaaggccgcaggaggcatcagtgtcactact
ctaggggcatcctgtgctgtatcctcaggggttggaagttcagcaacttcagggggctca
ggggcagcaacaaagggagctgctggagcggtggggttcagggccactggaaagggatcc
tctggcatgtcttctggttttgtgagtgggggcagagatggaaaaagagacgggggtctg
ggagccgtcacagtttcaacagtgacgaagaacagttacagttcaggagggtctggggag
gcaaagagaggatcgtcatcagcagtcacttattcacctgttccaaaagagaagaagggc
actaccaccatggcagcagctgtctcagatgtcttctacgaaagttcaagcacaaactcc
tctccagagtacaaaaggaaggagtacggcacttcaagtctagcttctagctctgccacc
agagggagaactcagagcagagagagtgaaatcagagcaagacttcagagtgcttctcct
ccagcaagttggacggagctggatgacgtgaagcgcctgctgagaggaaaccactccacc
agcaccagccccacccgctcccccaacaacacgctgcctatccccaagaaggccagcgtt
gaaactaggaccatgtctgacagtgccaccacaggttcagccaatcagatgccagagcac
tatggcagcatttggtccggaggtgggagcagtggctacggttataacactaaccccaat
aacctgtcggctacatccacccattactcatcaggagttcagaacaacctgaccctcagc
tccccatcgatgaacggtggactctctgctggcagcactgttcctatgtatggtcttcag
aataacctggccactaccagccccatggccttctctgccactggagccaacacacaaaca
gtttatggtgtccagaaaaatgtgtctggtactgtaatcggcacaaccacagtgagaccc
agcagtcccattaatgatgagagcccaggcaaagactttaagtttgtgctgatagagaag
gagaatgctcctgtgaaaaaggagacggagcggctggtcatgaccaaagacacagggaag
cagttcatgtctactgcacatgctactacttctgcgttcttctctggggactccctacag
agagagaaacagaagttatcatccagcacaatggaggaaggaacagatactaaatctgca
accctaaaagtggccacaaaagacaaagccacctacgcagagatcagtgagagtgactcg
gtcttcagcttctgctcctgctgcagctggtggaagtggctgctgggcctcctgctcagc
ctgctcctcctcctcggcctcctctttggactcatcgctttgggtgaacaagtgaaacgc
ctgcagaaccgcgtcgaagctctggaagccatcactggcacggcctcagccaggtccagc
cgcctctcggccgcctctggcatcaacatcatcgacccgctggactccacgtacatcgag
aggagttctgctgggtctaccctgacccgctctgacaatgggatcaaccttggggcagct
gggcctgcagtaggtgctgggagtgggccaggacaggacagtgccgccctgcagagaacc
gtgcagcatctggtcaggactgaactccgctctgatgctctgagagattcacttgcatac
tcactaaaaggggagagaggagacccaggacctaaaggtgatccagggatgcttggacaa
aaaggtgacggtggctttcctggcctgccaggccctcctgggcagttagggcaccccgga
caggatggaccgaggggaccaaagggaagtgcaggtgaacaaggttctgagggtccacca
ggccagaggggccgggatggaccaatgggctcccgcggagaggctggaccaccaggtttg
ggagagaaaggagacagaggaactcaaggcgaggcgggacgtcccggtcttgctggccct
cctgggcctgtggggccaaaaggttctacaggagagcagggtacccatggaattccaggt
gccccaggtccaaagggtttccagggtgaagcaggagccccaggagcgcctggtgatcga
ggaacaccgggtatatcaggaatcaaaggtgacccaggagagaggggagcacgtggaata
tcaggtgaaccaggacaacctggaccacaaggccctggaggaccaaagggatctaaagga
agtggaggtgaagcaggcttaaatggacttcctggtgctagaggaccacctggaattcct
ggagatgttggtcccagaggtgaaccaggagcacctggtaaaatcattgcttcagctggc
tctaatgctgttgccatcccaggaccaccaggaccttccgggcctccaggtcctgctgga
acccatggtctgtctggtcccatcggccccgctggtctcccaggacgacccggaactaag
ggagatcaaggagatcaaggagataaaggacataagggagataagggagagcaagggaaa
cctggcgagcctgggactgtcacacgttcagaaacccccggaaccgacaaaccttcctca
gctgctagcctgcctggcccaccaggtcctccagggcatgctggagcaagtggtcctcca
ggtccttctggtgagggtaaacagggtccccctggacgcaggggtcctgcaggagagcca
ggagttggtcttcctggatctccaggagataaaggagagccgggcagttttgttcctacc
tcaggaaccttttttgctggaccaccaggacccccgggcccactgggtccatcaggtgat
cgaggaccagaagggttccaaggagaaccaggtcaaccaggacttccagggagtccagga
agtgcagggaaaccaggtcatggtcagcctggacctaagggacctgagggtccaccaggc
cccgaggggccagaggggatcgatggacataaaggcccacctggaccacctggactatct
ggaccgcctggactatctggttcgcctggaagagatggaagtggaccaacagatgtgggt
ccgtaccttgcagagtaccttcagagtagctcattcagtccaggcgccccagggccaccc
ggaccaccaggtgctcctggaagagatggaactgaatctggatcacctgatgtgggccag
tacattgcagagtacattcagagtgatgggatcagacagtacctggcaggaccccctggg
cctcctgggcctcctggtggtccagggtctacaggggacgggctggtggatgatgtggca
aacagagtgatcgcctacgtccagagccaaggtagaggatatgacagtagtcctggccct
cctggtcctccaggtcctcctggctccatctctatcaatgatgtcatcgacgtgttacaa
cgagaggacgtgaggagatatgttgctggtacccccggtccaccaggaccccctggtgct
ccgggccagggcagctacggaatcaacacccaggaggtggctgaacgtgttctcacccta
ctgaatgataggcaggtgttaggtgtccctggaccccctggaacccctgggctacctgga
gactcatacccagttgtgggtcctcaagggcctccaggtgtccctggtatccctggtaga
gacggtccacctggaccaccaggatttagcaacgacattcgtgactacctgcacagtgtg
gagtttagaggtttaccaggtccccccggtccccctggaccagaggctccccctagtgtt
ctccacggactggtttcctttgctgagtatgcaaacagagaaccacccacagcagaacaa
caacaatacatcaacagtgatggtatgagaggaactatgttcggacttcctggtgcacca
ggccctcctggacccccaggacacaagggagagccaggtgaatctggcacaagggacagc
agcctggatactggtgactactccagcatggctgtcaaagtaacggattacatcaaatcc
cacgatctgctccgtggtgttgctggaaactctgaacattttgttcaaggacctccagga
cctcctggacttcctggaatgcctggacaaagccaattggctagctcccatgaaaatatc
atggatgttgtggaatacatcaaatctcagggtctgctacgtgacatagatcaaaaccac
aatgaacgtggcatccaaggtccacgaggaccaccgggtcctccaggtctacctggacac
agccagttgtttgggtcccaagaaaatgtcatagatttagtggaatacatcaaaaaaaat
ggagccattgtcggaccgcctgggagaccaggacagaaaggggacattgggttcccgggg
cccacaggagagagaggagaatccacactgactgttaaaagaaggaagaggaacgttcga
gtgtaa
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