Gymnodraco acuticeps: 117549981
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Entry
117549981 CDS
T09661
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03013
Nucleocytoplasmic transport
gacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117549981 (srrm1)
03015 mRNA surveillance pathway
117549981 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117549981 (srrm1)
03041 Spliceosome [BR:
gacu03041
]
117549981 (srrm1)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117549981 (srrm1)
Spliceosome [BR:
gacu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
117549981 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
117549981
NCBI-ProteinID:
XP_034078098
UniProt:
A0A6P8UMB5
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTETL
GFEDDVVIELIFNLLEEKNPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLATLKKVDDDKKEKDIRDRAQSKSPRSLHRPMSRRKSRSP
SPRRRSPVKRERKRSASRSPRRKPSPVTSSSPPPPLMQLPAKPVEQLVEPDALEGALPEP
AIQETPSTCDTVVEVVKPDPVTEVKESSPEKPLKKEERPKSRDREKDSRRDRPHHRSRSH
SRNRRRRSRSRSYSPRRRPSPRRRMSPRRRSPPRRGPPGNRNRHRRSPVRRRRSRSASSS
GSSSSNSRSPKKAMKRISNSPPRKGVHHPEKAISPAGKDRRSPSPRARRGRGSASPARPS
GLKQKQRGRNDSPSDNAKPRPSEGSDSEEDKNDKEATADSVQQRRQYRRQNRQTSSDSGS
SSSENEGPKRPTAGPGAKNGDVRRRRSRTPSPRRRHRDASPRKRRSPSPPRRRRSPSPPR
RRRSPSPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQKRKMSSSPPKRSSPGAK
RRPSRSPKRRNSPPQRRRMSPSSSPPRHRRSPMLPSARLSRDPRSPVAAAGRLSPSPATR
GRPVRCSTSPQGRFENSSASPSNPRRQQSPTHSGKPIRRVSRTPEPRNNKRPSPSPQPMR
RAASRSVSPQPAALKRPVPASASPSPSRSASGSPPPAKKASSGSGSQSPSKNSDVDGSGK
KKKKKKEKKHKKEKKHKKHKKHKKEKSNSAVTGDAHENHGAEDGESRKESDSEVEDSLAD
LEKHLREKALRSMRKAQLSPSQMS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacaagtgcggagcaagacaaccgtttcagcaacaag
cagaagaaactgctgaagcagctgaagtttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctggaagtcatcaaaccttggataactcagcgagtgacagaaactctg
ggattcgaggatgatgtcgtcatagagttaatatttaacctgcttgaggagaagaatcca
gatagcaagatgatgcagatcaacctgacaggctttctgaatgggaagaacgcccgggag
ttcatgagggacctgtggcccctgctgctgagtgctcaggagaacattgctggcatcccc
tctgctttcctggaacagaagaaggaggaaattaaacagagacagattgaacaagagaag
ctagctactctgaagaaagtcgatgatgataagaaggaaaaggacatcagagacagggct
cagtcaaaaagcccaagaagtttgcatcgtcctatgtctaggaggaaatcaaggtcaccg
tcaccacggcgaaggtcgccagtgaagcgtgaaagaaaacgcagtgcctctcgctcgccg
agacgcaaacccagtccagtcaccagcagctccccccctccacccctgatgcagctgcca
gccaaacctgtggagcagcttgtggagccggatgcattagaaggagccctgccagagccg
gccatccaagaaactccttccacatgtgacacagttgtggaggtggtaaaaccagaccca
gttactgaagtcaaagaatcttcgccagagaagcctctcaagaaagaggaaaggcccaag
tcccgggacagggagaaggacagcaggagggacagacctcaccaccgctctcgttctcat
tcccgcaaccgcaggcgacgctcccgctctagatcctactctcctcgtagaagaccaagt
cccaggaggaggatgtctcctcgtcgtaggagcccccccaggcgtggcccccctggcaac
agaaacagacatagacggtccccagtccgcaggaggcgctcacgctctgcttcatcttct
ggcagcagctcctccaactctcgctctcctaaaaaagcaatgaagagaatatccaactcc
ccacccagaaagggggtccatcatcctgaaaaagccatcagccccgccgggaaggacagg
cggtcaccatctcctcgggccagaagaggccgaggctctgcgtcaccagccaggccgtct
ggtttaaagcaaaaacaaaggggaaggaatgattctccgtctgataatgccaagcccaga
ccttctgaaggctctgactcagaagaggataaaaatgacaaagaggcaacagcagattcg
gtgcagcagcgacgtcagtatcgcaggcagaaccgacagacatcttcagattcaggatct
tcttcctctgaaaacgaggggcccaagcggccgacagcagggccgggagccaaaaacggg
gatgtgaggaggagacgcagccgaacaccgtcaccacggaggagacacagagatgcctcc
ccaaggaaaagacgctctccatctcctccacgcagacggcgctccccgtctcccccacga
cgtcgcagatctccttctcctcctagacgaaggtccccttccccgcctccccgtcgtcgt
tctccatcccccagacgatattctccccctatccagcgtcgctacagcccctcacctttg
cccccacagaagaggaaaatgtctagctctcccccaaagcgctcttctccaggggccaag
cgacgcccctccaggtcccccaagcgcagaaactcccctcctcaaaggagacgcatgtct
ccatcctcatctccacccagacacaggaggagccccatgttgccttctgctcgactaagc
agggacccacgatcccctgtggcagcagctggccgcctctccccgtcccccgcaacccgc
ggtcgccctgttcggtgttccaccagtcctcagggacgttttgaaaactccagtgcatct
ccatctaacccgcggaggcagcagtccccaacacacagcggcaaacccatccgccgagtg
tcccgcaccccagagccacgcaacaacaagagaccctctccgagcccccagcccatgagg
agagcagcctccagatctgtttcccctcaaccagcagctctgaaacgtcccgtccctgca
tctgcctccccctcaccctcccgctctgccagtgggtctccaccaccagcaaagaaagcc
agcagtggttccggcagccaatccccaagcaagaattccgatgttgatggcagtggaaag
aagaagaaaaagaagaaggaaaagaaacacaagaaagagaagaaacacaagaagcacaag
aagcataagaaggagaagagtaatagtgctgtgaccggtgatgcacatgaaaaccacggc
gcggaggacggagagtcaagaaaggaatcagatagtgaagtagaggacagcttggccgac
ctggagaagcacctaagagagaaagccctacgatccatgaggaaggcccagctgtctcca
tcccagatgtcctga
DBGET
integrated database retrieval system
