Gymnodraco acuticeps: 117550373
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Entry
117550373 CDS
T09661
Symbol
polr1a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117550373 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117550373 (polr1a)
Enzymes [BR:
gacu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117550373 (polr1a)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117550373 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
117550373
NCBI-ProteinID:
XP_034078691
UniProt:
A0A6P8UQ75
LinkDB
All DBs
Position
Unknown
AA seq
1694 aa
AA seq
DB search
MLFSKEAPWRRLEGLSFGMYSAEEIRKLSVKTITNFRFLDAVGNVAPNSLYDLALGPADN
KEVCSTCCQDFNNCPGHMGHVELPLPVYNPLFFDKLYLLIRGSCLSCNMLLCPRAAIHLL
LSQLRLLDHGNMQEVYQVEQVLSQHLEENPKATGDEIQLVLKQFTDSIVGVNTEGSANTK
PIKHLVEKKYSLINDFWRIHMKSRKCPYCSTGKFTVRREHNSKLIVTMPSGAQTLGNTDE
DLAGKRVYLTASTAREHSNKLWAKEGFFLKCLFSGMEEGKLSLAAEEGFYSDHFFLELLV
VPPCRYRPINRIGDQMFTNGQTVNMQAVMKDCAIIRKLLALIAGEKIDKEEEAPEQMDQA
FLTGIPGLTVTDKLYNIWVRLQTHVNIVFDSDMDKMMSEKYPGIRQILEKKDGLFRKHMM
GKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPFNVKELRQAVLNGPNVHPG
ASMVINEDGRRTILSPTSLVQREAVAKQLLTPCDGPHKIPIKIVNRHIKNGDVMLLNRQP
TLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELARAEAYTLVST
DQQYLVPKDGTPLAGLIQDHMVSGTRMTIRGCFFTRVQYIELVYRGLTDKPGRVKLLPPA
IIKPQQLWTGKQVVSTLLLNVIPQNAVPLNLVGKSKIPSKAWIQVPPRAAPGYKPDSMCD
SQVVFRQGELLVGVLDKAHYGSSSYGLVHCCYELYGGATSGKLLSCLARLFTAYLQLYRG
FTLGVEDILVKPGANRQRKKIIQESLKIGTKALQAAFNLPPNVDHAEAQSRWQDAHLNPD
QKDFSTADHKFKEVANQVNNEINKVCMPVGLHTSFPDNNLQLMVQSGAKGSTVNTMQISC
LLGQIELEGRRPPLMPSGKSLPCFQPYDPAPGAGGFISGRFLTGIKPQEFFFHCMAGREG
LVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTPFLQE
RQFPFIEDNYEVIRRLQGLDKVLPRLDPHSAARHFASIQRWKAKREVACPRKGAFLLYSQ
KKLAHLEQTEQGGEPDVCGRKASILQLIQQWQALDDSSRSKYSRKSSRCPEPSLGQLRPD
VCFGSVSENFHSITEKYLQSEGRRKQDSIDTNSLRQLLHYKWQRSLCDPGEAVGLLAAQS
IGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMRVPVLNTKRALKRA
KTLRKKLTRVCLAEVLQKVDVVETLRIEDHLKLRTFKVTFNFLPPDRYCEDKLLTPHQIL
YFMENRFFRLLLEAIKKRSAKLASIAVETRKATLRDKDNDAEGTADNAGLDDVEIEEERE
IVDDQANEGDADASDAKRKDKQQEEVDYESEEEDKGEEDIEDQDQDEEQEEGEEEAEGES
EESQPESGRVTSERRKKKISKRLEEEEEDPLDLMRINYLFCSPTAIERYSYDAESELWCE
VDLVLPVSKVHFDLTSVLSTLAQNAVIMETKGLTRCLLSEVTTKTGEKETLFNTEGINMH
ELFKHSDILDINRLYSNQVHAMAQTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVAD
YMCFEGIYKPLNRHAIRSNSSPLQQMTFETSFKFLKQATMLGSHDELVSPSACLVAGKVV
KGGTGLFDLKQPMQ
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttagtaaagaagcgccatggcggcgtctggaaggcctgtcgtttggcatgtac
tcagctgaagagataaggaagctgagtgtgaagacgatcactaacttcaggttcctggat
gccgttgggaatgtggccccaaacagcctgtatgatctggccctgggaccagcagacaac
aaagaggtgtgttcaacctgctgtcaggacttcaacaactgtccaggtcacatggggcat
gtggagctacctctacctgtttacaacccgctgttctttgataaactgtacctgctgatc
cgtggctcgtgtctctcatgtaacatgctgctgtgccctcgcgccgccattcacctgctg
ctcagccagctgcggctgctggaccacgggaacatgcaggaggtgtaccaggtggagcag
gtcctcagccagcacctggaggagaaccccaaagccacaggagatgagatccagctggtg
ctgaagcagtttacagacagcatagtcggagtaaacactgaaggctcagcgaacaccaaa
ccgatcaaacaccttgttgaaaagaagtacagtttgatcaatgacttctggaggatccat
atgaaatctaggaagtgcccttactgcagtactggcaagtttacagtgcgccgtgaacac
aacagtaagctgattgtcacaatgccatcgggagcacagacccttggcaacactgatgag
gatctggcgggaaagagagtgtacctgacggcgagtactgccagagaacacagcaacaaa
ctgtgggcgaaagaaggtttcttcttgaagtgcctgttctcaggaatggaggaggggaag
ctgtcactggcagcagaggaaggtttctattctgaccacttcttcctcgagctgctggtg
gtcccaccctgcaggtatcgtccaatcaatcgcatcggtgaccagatgttcaccaacggt
cagacagtcaacatgcaggcggtaatgaaggactgtgcaatcatccggaaactgctggct
ctcattgcgggggagaagattgataaggaggaagaggctccagagcagatggaccaagcg
tttctgacggggatccccgggctgacggtcacagataaactctacaacatctgggtgcgg
ctgcagacacacgtcaacatcgtctttgacagcgacatggacaaaatgatgtcggagaaa
taccccggaatcagacagatcctggagaagaaggacggactcttccggaaacacatgatg
ggcaaacgagtggactttgctgcacgatcagtcatctgtcctgacatgtacatcgggacc
aacgagatcggcatccctatggtgtttgccaccaagctgacgtacccccagcccgtcacc
ccctttaacgtgaaggagctccgccaggccgttctcaacgggcccaacgtccaccccggg
gcgtccatggtgataaacgaggacggccggagaaccatcctgtcccctaccagcctcgtg
cagagagaagccgtcgccaagcaactgctgacgccctgcgacgggccgcataagatcccc
atcaagatcgtgaatcgtcacattaagaacggagatgtgatgttactgaaccgacagccc
actctgcacagaccctccatacaagcccactgtgctcgcatcttaccgggagagaaggtt
ctgaggcttcactacgccaactgcaaagcatacaacgccgactttgacggcgacgaaatg
aacgctcacttccctcagagcgagctggcccgagccgaggcctacacgctggtcagcacc
gatcagcagtacctcgtccccaaggatggtacacctttagcaggtctgatccaggaccac
atggtgtcgggtacgaggatgacgatacgtggctgtttcttcaccagagtgcagtacata
gagctggtatacagaggactgactgacaaaccaggcagagtcaaactactgccacccgcc
attataaaaccacagcagctatggacagggaagcaggtggtttccacactcctgctgaat
gttatcccacagaacgccgtgcctctcaatctggttggaaaatccaaaatccccagcaaa
gcgtggatccaagtcccaccccgagctgccccaggatacaaacctgacagcatgtgtgac
tcacaggtggtgttccgtcagggcgagctgttggtgggtgttctggacaaagctcactac
ggctcctcatcctacggtctggtccactgctgctacgagctttacggaggggcgaccagc
ggcaagctgctcagctgccttgctcgactcttcactgcgtacctgcagctgtacagaggt
tttactctgggtgtggaagacatccttgtgaaaccgggcgccaacaggcagaggaaaaaa
atcattcaagaatcactgaagattggcaccaaagccctgcaggcagccttcaacctgccc
cccaacgtggaccacgctgaggctcagagccgctggcaggacgctcacctcaaccccgac
cagaaagacttcagcacggccgaccacaagttcaaagaagtggctaaccaagtgaacaat
gaaattaacaaggtgtgcatgccagtgggactccacacgtctttcccagacaacaacctc
caactgatggtccaatcaggagccaagggctctactgtaaacaccatgcagatttcatgt
ttactaggccagattgagttggagggtcgtagacctccattgatgccttctgggaaatct
ttgccgtgcttccagccctatgaccctgcccccggcgcagggggctttatttccggaagg
ttcctcactggaatcaaaccacaggagtttttcttccactgtatggccggcagagaggga
ctggtggacacagctgtgaaaacatctcgatcaggatacctgcagagatgtgtcataaag
catctggagggtttggtggtgcagtatgatctgacggtgagggacagcgatggctcggtg
gtgcagttcctgtacggtgaagacggactggacatccctaaaactccgttcttgcaggag
agacagttccccttcatagaggacaactacgaggtgatcaggaggctgcaggggctggac
aaggtgttgccccgcctggaccctcactctgccgctcgacacttcgcctccatccagcgc
tggaaggccaagagagaggtggcttgtccacgcaaaggagcattcctgctgtattctcaa
aagaagttggcccatctggagcagacggaacaaggaggagaaccagatgtctgcggccga
aaggcttctatactacagctcatacagcagtggcaggctctggatgattccagcagatcc
aagtacagcaggaagtcctcccgctgccccgagccctctctgggccagttacggcccgac
gtctgcttcggatcggtctctgaaaacttccacagcatcacagagaaatacctgcagagc
gaaggaaggcgaaaacaggacagcatcgacacaaacagcctccgtcagctgctgcactac
aagtggcagcgctcgctgtgtgacccgggtgaagcagtgggtctgcttgcagctcagtct
ataggggagccctccacccagatgaccctcaacaccttccactttgccggcagaggagag
atgaacgtgactctgggaatccctcgactgagggagatcctgatggtggctagctccaac
attaagactcccatgatgagagttcctgtgctaaacaccaagagagccttgaagagagcc
aagacgctgcgcaagaaactcaccagagtctgcctggctgaggtgctgcagaaggtggat
gtggtggagacgctgcggattgaagatcacctcaaactgcggactttcaaagtcaccttc
aactttctgcctcctgaccgctactgtgaagataagctgctcacaccacaccagatcctg
tacttcatggaaaataggtttttccgtctcctgctggaagccattaagaagcgcagcgcc
aagcttgcctccatcgccgtggaaacaaggaaggccactctccgagataaggacaacgat
gcagagggcaccgctgacaacgcagggctagacgacgtggagatagaagaggagcgagag
attgttgacgaccaggccaacgaaggagacgccgacgcatcggacgccaaaaggaaagac
aaacagcaagaggaggtggactatgagagtgaggaagaggacaaaggcgaagaggatata
gaggaccaggaccaggatgaggagcaggaagagggggaggaggaggcagaaggtgagtcg
gaggagtcccagcccgaatctggtagagtgacatcagagaggaggaagaaaaaaatatca
aaacgacttgaagaggaagaagaggaccccttggatctgatgaggattaactacctgttc
tgcagtccaaccgccatcgagagatacagctacgatgctgagagcgagctgtggtgtgag
gtggacctggtgctgccggtgagcaaggtgcactttgacctcacttcagtcctgtcaaca
ctggctcagaacgccgtcatcatggaaaccaaaggcctgacgcgctgcctgcttagtgaa
gtcaccacgaagacgggagagaaagagacgctcttcaacacggaaggcatcaacatgcac
gagctgttcaagcacagcgatatcttggacatcaacagactctactccaatcaggtccac
gccatggctcagacctacgggatcgaagtggctctgaaggtcatagagaaggagatcaaa
gacgtctttgctgtctatggtatcgaggtggacccccgacatctgtcactggtggcagat
tacatgtgttttgaaggaatatacaagccgttaaaccggcacgccatccgctccaactcc
tcccctctgcagcagatgactttcgagaccagcttcaaattcctcaaacaggctaccatg
ctggggtcacatgatgagctggtgtcaccctctgcctgtctggtggcggggaaggtagtc
aaaggtggaaccggactgtttgatctcaaacaacctatgcagtga
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integrated database retrieval system
