Gymnodraco acuticeps: 117550377
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Entry
117550377 CDS
T09661
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gacu04515
]
117550377 (pcdh10b)
Cell adhesion molecules [BR:
gacu04515
]
Cadherins
Protocadherins
117550377 (pcdh10b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
117550377
NCBI-ProteinID:
XP_034078696
UniProt:
A0A6P8UQ79
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MIVLLVVLCITDGVLAQIRYSVPEEADHGILVGNIAEDLGLDLTKLASRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDREQICKQSASCQLNMEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESAVPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYTVSLSE
NAPVGMLVIQLNATDMDEGLNGDIVYSFSNHISNRVKDLFSIDPRTGRIEVRGEVDFEES
SLYQIFVQAKDLGPNAVAAHCKVLVKVTDLNDNAPEITFSTVTESVSEKAAPGTVIALLS
VTDLDAEENGQIHVEIIGDVPFKLKTSFRNYFTIVTDGPLNREQADSYSITVVARDKGTP
SLATSKSIRVQVSDENDNLPTFTQPIYDVYVTENNVPGAYIHAVTALDPDIGLNALISYS
ILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQAKDAGTPELSTNSTVKV
IIVDQNDNAPLVLAPLGKNGTAKEPLPRTAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSAKRDPHQLYDLLIEVRDHGQPPLSSSASVLVMLVDSVAE
GRGVGNRGGTAKAKEGTLDLTLILIIALGSVSFIFLLVMIVLAVRCQKDKKLNIYSCLTS
ECCLGCSSCCSRQARARKKKLTKSDIMLVQSAGNVSGAGTAQVPVEESGSFGSHHQNQNY
CYQVCLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAVVTGFTDQQPDIISNGSILSNETK
HQRAELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSSGKKRSAA
GADLFSNCTEECKALGHSDRCWMPSFGPSDGRQGPDYRSNLHVPGMDSVPDTEVFESPEL
TADQSFSTFGKETPLSHQHLHHHLLKNHHHQQGSLERKEFVPYNPAYLTRKRVC
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgcttttggttgtcctgtgcatcacggatggagtgctcgctcagatacgctac
tctgtgccggaggaggcggaccatggcattttggtggggaatattgccgaggacctggga
ctggaccttaccaaactggcatcccgccgcttccaggtggtgcccagctctcggacaccg
tacctggaagtgaacctagagaacggcgtcctgttcgttaacgaaaagatcgaccgggaa
cagatctgcaagcagagcgcgagctgccagctcaacatggaggtgttcttggagaacccg
cttgagctgtttcgggtcgaaattgaggtggtagacattaacgacaacccgcccagcttc
ccggagacagacatcacggtggagatctcagaaagcgccgtcccgggcacccggttccct
ctggagagcgcattcgacccggacgtgggctctaacgctttacgaacgtatgatatcacc
actaacaactacttttatttggatgtgcagacccaaaccgacggaaacaagttcgcagag
ctggtcctggaaaagcctctggaccgggagcagcaggcagcgcacaggtacgtgctgacc
gcggtggacggcggccagcctccccgaactggcaccgcgctgctggtggttaaagtgctg
gactctaatgataacgtgccggtgtttgaccagcccgtttacacggtgagcctctcggag
aacgcaccggtgggcatgctagttatacagctgaacgccaccgacatggatgaaggacta
aacggggatatagtttattccttcagtaaccacatatccaaccgcgtaaaggaccttttc
agcatagacccgcgcaccgggcgcatcgaggtgcgcggagaggtggattttgaggagagc
agcttgtatcagatctttgtccaggccaaggacctgggaccaaacgccgtggccgcgcac
tgcaaagtgctggtcaaagtcaccgatttaaacgacaatgctccggagatcaccttcagc
actgtcaccgagtctgtgagcgaaaaggcggctccgggcaccgtcatcgcgctgctcagt
gtgacggacctggacgcagaggaaaacggacagatccacgtggagatcatcggtgatgtt
ccgtttaaattaaaaacatccttcaggaattatttcactatagtgactgacggtccgttg
aaccgggagcaggcagactcttactccattactgtggtggcgcgggataaagggacgccc
tctcttgccaccagtaaatccatccgagtccaggtgtcagatgagaacgacaacctgccg
acctttacgcagcccatatatgatgtgtatgtgaccgagaataacgtgccgggggcctac
atccacgctgtgacggccctggacccggacatcgggctgaacgcgctcatcagctactcc
atattagagtgtgacatccagggcatgtcagtgaaaacgtatgtgtctatcaatgaggag
acgggctatctgtatgcgctcaggtccttcgattacgagcagctgaaggatttcacattc
atggtgcaggccaaagacgcaggcaccccggagctgtccactaactccacagtcaaagtc
atcatcgtggaccagaatgacaatgcccccctggtgctggctcccttggggaagaacggc
acagccaaagagcctctgccgcgcaccgctgaaccgggctacctggtgacccgcattgtg
gccatggatgctgatgacggagagaatgcccgtttatcctacagcatccagagggggaac
gaaaatggtatgttccggatggactggaggacaggtgagctccgtacggctaggcgggtg
tctgccaagcgagacccccaccagctgtacgacctgctgatcgaggtgcgggaccacggc
cagccgccgttgtcctccagcgccagcgtgctggtgatgttggtggacagcgtggctgaa
ggccgcggcgtagggaacagggggggcacagccaaggccaaagaggggaccctggatctc
accctcatcctcatcatcgccctgggctccgtctctttcatattcctgctggtcatgatc
gtgctggccgtgcgctgccagaaggataaaaagctcaacatctacagttgcctgaccagc
gagtgctgcctgggatgcagctcgtgctgctcccggcaggcccgggcccgcaagaaaaag
ctcaccaagtcagatatcatgctggtgcaaagcgccggtaacgtcagcggggccggtacg
gctcaagtccccgtggaggagtcaggtagcttcggctctcaccatcaaaatcagaactat
tgctaccaggtatgtctgactccagagtctgccaaaaccgacctcatgttcctaaagccg
tgtagtccgtctaggagcaccgacaccgaacacaacccgtgcggggccgtagtgacaggg
tttacagaccagcaacccgacatcatatcaaatggcagcattttatcaaacgagaccaaa
caccagcgagctgaactcagctacctggttgacaggccgagacgcgtcaacagttcggcc
ttccaggaggcagacctggtcagctccaaagacagcggccacggagacagtgagcagggg
gacagcgaccacgacgccaccaaccgaggacattcctccggtaagaagcgctctgctgca
ggcgctgacctcttctctaactgcacagaggagtgtaaggccctgggccactcggaccgc
tgctggatgccgagcttcgggccctctgatgggcgccagggcccggactaccgcagcaac
ctgcacgtgcccggcatggactcggtccccgacacagaggtatttgaaagccccgagcta
acggctgatcaatcattctccacctttggcaaagagacgcctctcagtcaccaacacctc
caccaccatctcctcaaaaaccatcaccaccagcagggctccctagagaggaaagagttt
gtgccctataacccggcttatttaacgcggaaaagggtttgctag
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