Gymnodraco acuticeps: 117550686
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Entry
117550686 CDS
T09661
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117550686 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gacu04131
]
117550686 (vps8)
Membrane trafficking [BR:
gacu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117550686 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_Vps41
WD40_CDC20-Fz
Clathrin
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
TPR_VPS8_2
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_UBOX
zf-RING_11
Beta-prop_WDR5
zf-RING_2
PHD_4
zf-C3H2C3
GRIP
EIF3I
zf-C3HC4
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
117550686
NCBI-ProteinID:
XP_034079071
UniProt:
A0A6P8UR43
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MSESPDARSLLSASSQLNLMEIDAIDDKEFDIPQVDTPPTLESILNELEDEEEPFVLEDT
CVLNTDNMDAHSCDTSSLASSDSGDPAHLKRKRRTVDLNATVHGSVLRHSLLKGISAQIV
SAADKVDAGLPTAITVAGVIVVGTSHGLALVFGKDTNQALRLCLGTKATGAEFGAVSALS
VNHDCSRLLCGFAKGQITMWDLASGKLLRTITDAHPPGTAVLHVKFTDDPTLAVCNDSGG
SVFELAFRRVMGMRSCDSRCLFSGSKGEVCCIEPLRAPPDFRDHPITHYSLLAMASLTKI
LVIGLKPSLKVWMTFPYSKSDPSSVPQLAWQFVPVQKTLNPVLAFCKGDTVHFLLVKKED
TGTIHVIKQKQLQLSCDIISLSWINSRTLVLVDSHEKLQVVDRASQEVLETLDLEQVQLV
YNSRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQIVYLGTKSAHIMALRNWRERIDC
LLKQEHFVEALSLAWSFHEGTAKAVVGLVGDQMKKKGVVGDKMVEILFQFAEHALKKCPE
HGKIQVMEQHFHDVVPVLVDYCLLLKRADLMFNQLYDRLLENSVAKGVFLEALESYIVAD
RLGHLTTPIMRDLLAHYHGNGMMDSLERCIVHLDVTSLDIQQVVQVCWENQLYDAMLYVF
NSGMNDYITPMERLFAVIGPPLTEGRGLTDEEVVMGNKLLVYISCCLAGRAYPLGDIPED
LVVQVKNQVFEFLIRRHSGDSLEKEELFPIIRTLLHFDTREFLNVLAMTFEDFKNDKQAL
EYQQRIVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCCP
DDDSRHTERQQVLLELLQVGGVVQFNEERLLTLAEKANFYQICEFLYEKKHLFDRIIDCY
LRDPLRKGEIFSYIHNLLSMPGYSAEEKQTVKDKVLQHIQELVTLDPSKSADMVLFHFAE
EVQQIISELQDDQLLFRFLSCLLEPREGHLSGIMLPLQRDLHELLLDLLCRFGPRQLLGF
LQTSQHYRLEEAIQTTQKYHHSEATAYLLEMKGDVHGAFAVLLETLKEKLSVLTAESERA
DAGGEERDRDHTLSRVKESLNDIIELCHRSSDSLDQQQREVLLLPCMGFKVLWFPLLETM
MASQKLVKGLNDEHTFEVLKELTMKVLNCMSSFIPLPTIIQRILQDPVYGRGKLAEIQGL
ILGMLDTFNYEQTLLETTTSLLNHDLHWSLAHLRAAVTRGLHPRQDHCNICLQQYKRRHD
SAEEIIVFSCGHLYHYQCLQQKACGGGVTSELNQRWSCYKCSSSQGGRGGTTTELKRGRI
TSLAQTRVTSVHHDGGAEANGKKVFVEATLDSQQEQSWDQLRCLYRGPSRLSILAELSQC
QSNEKTGLLMPTQPGTESFQLKLSPPPLIEE
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtctccggacgcccgcagcctcctctcggcctcctcacagctcaacctgatg
gagatagacgcgatcgatgataaagagtttgacattccccaagttgacacacctcccacc
ctggagagcatccttaatgagctggaggatgaggaggagccctttgtgttggaggacacc
tgcgtgctcaacacagacaacatggacgctcactcctgtgacacctcctctctggccagc
tctgacagtggagacccagcacacctcaaacggaagaggaggacggtggacctgaacgcc
acggtgcacgggtctgttctccgacacagcctgctgaagggcatctctgcacagatcgtc
tctgctgctgacaaagtggatgccggcctgccgacggctataacagtggcgggtgtgatt
gtggtaggaacgtctcatggtctggctctggtcttcggaaaagataccaatcaggctctg
cggctgtgtctgggtaccaaggcaacgggggcggagtttggagctgtctctgctctgagc
gtcaaccacgactgctcacgacttctctgcggcttcgccaaaggacagatcacaatgtgg
gatctagccagtgggaagctcctgagaacaatcactgatgcccaccctccaggaacagca
gtactgcatgtgaagttcacagatgacccgactcttgcagtgtgcaatgacagtggagga
tcagtgtttgagctggctttcaggagggtgatggggatgcggtcctgtgactcacgctgt
ctcttcagtggatctaaaggggaggtgtgctgtatcgagccgctgcgtgcccctccagac
ttcagagaccatcccatcacacactactctctgctggccatggcctccctcactaagatt
ctggtcattggactgaagccctcgctgaaagtctggatgactttcccctacagcaagtct
gacccgtccagtgttcctcagctggcctggcagtttgttcctgttcagaagacgctcaac
cccgtcctggctttctgtaaaggagacacagtccacttcctgctggtaaagaaggaggac
acgggcaccatccatgtcatcaaacagaaacaactccagctcagctgtgacatcatcagc
ctgagttggattaacagccgtaccctggtcctggtggacagccatgagaagctgcaagtt
gtggaccgggccagtcaggaggttctcgaaactctggacctggagcaggtgcaactggtc
tataacagccgacatttcaaatcgctggccactggagggaatgtctcccaggctctggct
ttagtgggagagaaggcctgctaccagtccgtctccagctacgcaggacagatagtctat
ttgggtaccaagtcggctcacatcatggctctgaggaattggagagagcgcatcgattgc
ctgctgaagcaggagcatttcgtggaggctctctctctggcctggtccttccatgaggga
actgctaaagctgtggttggtcttgttggagatcaaatgaaaaagaagggagttgtaggg
gacaagatggtggagatcctcttccagtttgcagagcatgctctgaagaagtgtccagaa
catggcaagatacaagtgatggagcaacacttccacgatgtggttccagtcctggtggat
tactgcctgctgctgaagagggcagacctgatgttcaaccagctgtacgaccggctgctg
gaaaactctgttgctaagggagtcttcctggaggccctcgagtcgtacatcgttgccgac
cgcctgggtcacctcaccacacccatcatgagggacctcctggcccattaccatggcaac
ggtatgatggacagcctggagagatgcattgtccatctggatgtgaccagcctggacata
cagcaggtggttcaagtgtgttgggagaaccagctctatgatgcaatgctctacgtcttc
aacagcggaatgaatgactacatcacccctatggagagactttttgcagtgattggccca
ccacttacagaggggaggggcctcacagatgaggaagtggtgatgggaaacaaactgttg
gtgtatatcagctgctgtcttgcaggcagggcgtatccactaggagacatccctgaagac
ctggtggttcaagtcaagaaccaggtgtttgagtttcttatccgtcgacattcaggcgac
tcgttagaaaaggaggagctctttcctattatacgtactctcctccactttgatacccgg
gagttcctcaatgtcctcgccatgacatttgaagactttaagaatgataagcaagccctc
gagtaccagcagaggatagtggacatcctactccaggtgatggtggacaacccagacttc
actccctcccaggtgggcgggctcttcacctttttggctcgtcagttggccaagccagac
aacacactgtttgtgaacaggaagctctttgatcaggtgctggagttcctgtgttgccca
gacgatgactctcgacacactgagaggcagcaggttctgctggaactgctgcaggtcgga
ggggtggtccagtttaatgaagaaaggctgctgactttggcagagaaagccaatttctac
caaatctgtgaatttctctatgagaagaaacatctgttcgaccggatcatcgactgctac
ctgagagaccccctcaggaagggggagatattcagctacatccacaatctgctgtccatg
cccggctacagcgctgaggagaaacaaacagtgaaggacaaagtgctgcaacacatacag
gagctggtgacccttgaccccagcaagtcagctgacatggtgctgtttcacttcgctgaa
gaggtgcagcaaatcatctctgagcttcaggatgaccagttactcttcaggttcctcagc
tgcctcctggagccacgggagggccatctctcagggatcatgctgcctctgcagagggac
ctccatgagctcctgctggacttactgtgccgcttcggcccccggcagctcctgggcttc
ctgcagacctcccagcactacagactggaggaggccatacagacaactcagaagtaccac
cacagcgaggccacagcctacttgctggagatgaagggagatgttcatggagcttttgct
gtcctgttagagactctgaaggagaaactgagtgtcctcactgctgagagtgagagagca
gatgcagggggggaggagagagacagggatcacacactgagcagagtgaaggagtcgctg
aatgacatcatagagctgtgccaccgaagctctgatagcctggaccagcaacaaagagag
gtactgctgcttccatgcatgggattcaaggtcttgtggtttccacttctagagaccatg
atggcctctcaaaaactagtgaaggggcttaatgacgaacacacatttgaggtgctgaag
gagctgaccatgaaggttctcaactgtatgagcagctttattcctctgcctactatcatc
cagcggatactgcaggacccggtctacgggagaggaaagctggcagagatccaaggcctc
atcctgggtatgctggatacctttaactatgaacagactcttcttgaaaccaccaccagt
ctgttgaaccatgacctccactggtccctcgctcaccttcgtgccgccgtcaccaggggg
ctgcacccccgacaggaccactgtaacatctgcctgcagcagtacaagaggaggcatgac
tctgcggaggagatcattgtgttcagctgcggccacctgtaccactaccagtgtctgcag
cagaaggcctgcggggggggcgtcacttcagagctcaaccagcgctggagctgctacaag
tgttcctccagccagggggggaggggggggactaccaccgaactgaagagaggccgcatc
acgtccctggcacagactcgtgttacgtcggtgcatcatgacggaggagcagaggctaac
gggaagaaggtgtttgttgaagcaacgctggactctcagcaggagcagtcctgggatcag
ctgcgctgtctgtacagaggaccgtccaggttgtcgatccttgcagaactctcacaatgc
caaagcaacgaaaaaacagggctactgatgccgacccaacccgggacagagagtttccaa
ctcaaactctctcctccacccttaatagaagaatag
DBGET
integrated database retrieval system
