Gymnodraco acuticeps: 117551133
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Entry
117551133 CDS
T09661
Symbol
pbrm1
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1
KO
K11757
protein polybromo-1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117551133 (pbrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117551133 (pbrm1)
03036 Chromosome and associated proteins [BR:
gacu03036
]
117551133 (pbrm1)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117551133 (pbrm1)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
117551133 (pbrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117551133
NCBI-ProteinID:
XP_034079756
UniProt:
A0A6P8USR7
LinkDB
All DBs
Position
Unknown
AA seq
1663 aa
AA seq
DB search
MALKRRRATSPSSSVSGGDVDDNQSSSLVSSIGRKRRRTSNIPTVDPIAVCHELYNTIRD
YKDDQGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVEQLTSDFQLL
FNNAKTYYKSDSPEYRAACKLWDLYLRTKNEFVQRGEYDDDDEDGYYAHDNPGGSTEDES
APTCLKEVLEQLLDAVVSHTEPTGRLVSELFQKLPSKMQYPDYYAIIKEPIDLKIVAQKI
QLNHYRSVGAMAKDIDLLVKNAKTYNEPGSQVFKDANTIKKMFSQKKSEMEHGEPIKSSI
RIKXIGDNSQTKVEKSHVNFTTLXFSGSRNRRSAQGDRLSAITMALEYESDEEGILSGSV
HYDEGESEAESMTSNMDMSNPIFQLYEAVRGARNSQGQLISEPFLQLPSRKDYPDYYHQI
NQPISLHLIKNKMKNNEYESVEHIDSDLMQMFENAKRYNVPHSSIYKRALKLQHIQQMKR
KELLQRDDDDGDSMLSSATSDTSSTKRKSHKKNTKKNRMKTLFASVAEAREAGTGRRLCD
LFMVKPSKKDYPDYYKVILEPMDLRTIEHNIRSDKYMTEDAMVEEMKLMFRNARHYNEEG
SRVYNDADVLEKIMKDRRKDLGPATDDDDMMSPKLKIRKNSITLKKSKYLTPLQQKLNEL
YEAVKNFTDKRGRRLSTIFLRLPSRAELPDYYIAIKKPVDMEKIKSHMLANKYQDVDALV
EDLVLMFNNACTYNEPESLIYRDALMLHRVLLETRRDLEGGDDGHVPDVPRLIQELVRSL
FVSVLGHQDDEGRCYSDSLAEIPAVDPANPEKPPRNFEIIRTNVDRGRYKRLDVFQDHMV
EVLEKARRLNRTDSEIFEDAVELQQFFIRIRDELCKNGEILMTPALSYTSKHLHSDVEKE
KKEKLPKEFEEDKIKREEEKREAEKREDSVGGSWQSNLQRTYSQDCSFKDSMYHVGDYVY
VEPAEPNLQPHIIYIERLWQDDTGEKWLYGCWFYRPNETFHLATRKFLQKEVFKSDYYNK
APVSKILGKCVVMFVKEYFKLHPEGFRADDVYVCESRYSAKSKSFKKIKMWTMPPSSVRF
VPREVPLPVVRVASMFAPKQEEKPPEVVDEIKMTDSIVDKEREDVPMDMTNGEPGCQYYE
QLCYNNLLLKVGDCVYIGSHGLVRHRVGRIEKMWMRDGAGYFFGPIFIHPEETEHEPTKM
FYKKEVFLSNLEETCPMTCVIGKCVVSSFKDYLSCRPTEVPEENVLLCESRYIESEKQMK
KFKGLKRFSLSGKVVEDEIYYFRKLIVPQKEPSPLLDKKIEKLEAKFADMTDEELEDLGD
DDGELGDRSRFRRHSSMSSDMDTIPYTPLQSTPKSVKGLPKKEGSKRKINMSGYILFSSE
MRAVIKARNPDFSFGELSRLVGTEWRNLEGSRKADYEERAAKLAEQQERDRAHHQTSPRA
GTPVGALMGRVPPPIPKGILNHSMKPVSEGMMGAYRSAMMQGYGEGMVSMTGMPPHHMGV
PVFPQHLLPVMPGFPGMPYFGVNGPGGGHGAGNIQGSQMGSIGQGQQAPPPYPGQGQMGQ
PAHQQPSTPMFVSPPAKSQRLLHSEAYLRYIEGLTAESSTISKWDHALSVQKQDVRLTKE
QESRLPSHWLKSKGAHKTMADALWRLRDLMLRDTLNIRQTHNL
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaaaggagaagggcaacatccccctctagcagtgtgagtggaggagatgtt
gacgataaccagtcttcatctctagtgtcttcaattgggagaaagaggagaaggacctca
aacattcctaccgtggatcctattgctgtctgtcatgaactgtacaacaccatcagagat
tacaaggatgatcagggtaggatgttgtgtgagcttttcatcagagcacccaaacgaagg
aatcaaccggactattatcatgtggtgtctcagcctattgacatgatgaagatccagcag
aaattaaagatggaggagtatgatgatgttgaacaactcactagtgactttcaactgttg
ttcaacaatgcaaaaacatactacaagtcggacagtcctgagtacagagcagcctgtaaa
ctttgggacctttacctgagaaccaagaacgaattcgttcagcgaggcgaatatgatgat
gatgatgaagatgggtactatgcacatgacaaccccggagggtccactgaggatgagagt
gcacccacctgcttgaaagaagtcctcgagcagctccttgatgccgtggtgtctcacact
gagcccacaggccgcctggtcagcgagctgtttcagaagctaccctccaaaatgcaatac
ccagattattatgccatcattaaggaaccaatagatctgaaaattgtggctcagaagatc
cagttgaatcactacaggagcgttggtgccatggctaaagatatagatttgctggtcaag
aatgccaaaacgtataatgagcctggatcgcaagtgtttaaggatgcaaacaccatcaaa
aagatgttctcacaaaagaagtctgagatggagcacggagagccaatcaagtccagcatt
cgtatcaagtaaataggagacaactctcagactaaagtggaaaaaagtcatgttaacttc
accactcttnntttctctggctctaggaatagaaggtctgcccagggtgaccgcctctca
gcgatcaccatggctcttgagtatgaaagtgatgaggaaggcattctctccgggtccgtc
cactatgatgagggtgaatctgaagcagagagtatgacctctaacatggacatgagtaat
cccatcttccagctgtatgaggcggtgcgaggggccaggaacagccagggccagctgatc
tctgagccgttcctgcagctgccctccaggaaggactaccccgactactaccaccagatc
aaccagcccatcagcctccatctgatcaagaacaagatgaagaacaacgaatatgagagt
gtggagcatatcgactctgatctgatgcagatgtttgagaatgccaaacgctacaatgtt
cctcactcctccatctacaagcgtgctctcaaactccaacacattcagcagatgaagaga
aaagagctcttacagagagatgatgatgatggagacagcatgctctcctctgcaacgtct
gacaccagcagcacaaaaagaaaaagtcacaagaagaatacgaagaaaaaccgaatgaaa
actctttttgcctccgtggccgaggcgcgagaagctggcactggtcggagactttgtgac
ctcttcatggtcaagccctcgaagaaggactatcccgactactacaaggtcatcctggag
ccaatggacctcaggaccattgagcacaacatccgctcagacaagtacatgactgaagat
gcaatggtggaagagatgaagctgatgttccgcaatgcacgacactacaatgaagaaggc
tctcgggtctacaacgatgctgacgtcctagagaagattatgaaagacagacgcaaggat
cttgggccagcaacagatgatgatgacatgatgtctccaaagttgaaaataagaaagaac
agcattactctgaagaagtccaagtacttaacacccttgcagcagaagctgaatgagctc
tatgaggctgtcaagaacttcacagataagcggggccgtcgcctcagcacaatattcctg
cggctgccgtctcgggccgagctgcctgactactacatcgctatcaagaaacctgtcgac
atggagaagatcaagagccacatgctggctaacaagtaccaggatgtggatgcactggtg
gaggacttagtgctcatgttcaacaatgcctgtacttacaacgagcccgagtctctgatt
taccgcgacgccctcatgctgcacagagtgctgctggagaccaggcgggacctggagggg
ggggatgacggccatgtgccggatgtaccacgcctcattcaggaacttgtccgcagcctc
tttgtttccgtgctcggtcaccaagatgacgagggccgttgctacagcgattcactcgcg
gagatacctgccgtagatcccgcaaatcctgagaagccaccacggaactttgagattatc
aggactaatgtagaccgagggcgttataagaggctggatgtgtttcaggaccacatggtt
gaagtgctggaaaaagccagacggttgaataggaccgattccgagatcttcgaagacgct
gtggagctgcagcagttcttcatccggatcagagacgagctgtgtaagaacggagagatc
ttgatgactcctgccctcagctacacctccaaacatctgcatagtgatgtggagaaggaa
aagaaagagaagctccccaaggagtttgaggaggacaaaatcaagagggaagaggaaaaa
agggaagctgagaagagagaggactcagttggaggatcatggcagtctaacctgcagcgc
acttacagtcaggactgcagcttcaaagacagcatgtaccacgtgggagactatgtgtat
gtggagcctgcagagcctaacctccagcctcacatcatctacattgaacgcctttggcaa
gacgacactggtgagaagtggctttatggctgctggttctacagaccaaacgaaacattt
catctggccacaaggaagttcttgcagaaggaagtttttaaaagtgactattacaacaaa
gctcctgtcagcaagattctgggcaaatgtgtggtcatgtttgtaaaggagtacttcaaa
cttcatccagaaggcttcagagctgacgatgtttatgtctgtgagtcccgctactctgcc
aagtccaagtccttcaagaagatcaagatgtggaccatgcccccgagctcagtgcggttt
gttcccagagaggtccccctacctgtcgtccgtgtggcctccatgtttgctcccaaacaa
gaggagaaacctcccgaggtggtggatgaaatcaaaatgacagacagtattgtagacaag
gagagggaggatgttcccatggatatgaccaatggggagccggggtgtcagtactacgag
cagctctgctacaacaacctgttgctgaaagtaggggactgtgtttacattggttcacat
ggactagtgcgccaccgagtgggcaggattgagaaaatgtggatgcgagatggagcaggc
tacttctttggtccaatcttcatccacccagaggaaacggagcacgagccaacgaaaatg
ttctacaagaaggaagtgttccttagcaaccttgaggagacttgccctatgacctgtgtc
atcgggaagtgtgtggtgtcgtccttcaaagactacctctcctgccggccaactgaagtg
cctgaagagaacgtgctgctctgtgagagccgctacatcgagagtgagaagcagatgaag
aagttcaagggccttaagcgcttctcactctctgggaaagtggtggaggatgaaatctac
tattttaggaagctcatagtgccccagaaggagccctcccctctgctggacaaaaaaatt
gagaaactggaggccaagtttgctgatatgacagatgaggagctagaggatcttggggat
gatgatggcgagctaggggaccggtctcgctttcggaggcactcttccatgtctagtgac
atggataccataccttacactcctttgcagtccacaccaaaatccgtaaagggccttcca
aagaaggagggctccaagcggaagatcaacatgagtggctacatcctgttcagcagtgag
atgcgggcggtcatcaaagcccggaacccagacttctccttcggggagctcagccgcctc
gtcggcacagagtggaggaaccttgagggttccaggaaagcagattatgaagagcgagca
gctaaattggcagagcagcaggagcgggacagggcccatcatcagacgtcgcctagagca
ggtaccccagtaggggcactgatggggcgggtccctcccccaatccccaaggggatacta
aatcacagcatgaagcctgtgtcagaaggtatgatgggtgcatataggtcagctatgatg
cagggatacggtgaaggcatggttagtatgactggcatgccaccacatcacatgggggtg
cctgtctttccccaacatctcctgcccgttatgcctgggtttcctggaatgccgtacttt
ggtgtcaatggcccgggaggtggtcatggagcaggaaacattcaaggatctcagatgggt
tcgattggccaagggcagcaggctcccccaccgtacccaggacaaggccagatgggacag
cctgcgcaccagcagccctccacccccatgttcgtgtccccaccagccaaatctcagcgg
ctgctccactctgaggcatacctcagatacatcgagggcctgactgcagagtcctccacc
atcagcaagtgggaccacgctctttcagttcaaaaacaagatgtgcgcctcactaaagag
caggagagcagactgccatcccactggctgaagagtaagggggcccacaagacaatggca
gatgcactttggcgactccgtgacctgatgctgcgagacaccttaaacatacgccagacg
cacaacctgtag
DBGET
integrated database retrieval system
