Gymnodraco acuticeps: 117551241
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Entry
117551241 CDS
T09661
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117551241 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117551241 (polr1b)
Enzymes [BR:
gacu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117551241 (polr1b)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117551241 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
117551241
NCBI-ProteinID:
XP_034079913
UniProt:
A0A6P8UV22
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MDSSTKWNNLPKAPSLKNLTERGFGILNETQHAAVQDLTKAHIESFDQALTDGLSRVVQA
IPPLEFTFRNDRISLAFVEATLYSPVVAKGNICREMKVFPAECRGRRCTYKGKLVADVSW
SINGIPKGIIKQSMGQVPIMVKSKLCNLHGLSPKKLVEHHEESEEMGGYFIVNGNEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMRCVKEEHTAVNMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKSREDNSFYKSCASEMLRMVMEEGCTTRSKV
LNYLGERFRVKMNLPEWYTNDQCANYLLDECICIHLKSGMEKFYLLCLMTRKLFTFAKQE
CMEENPDSIMCQEVLTPGQLYLMFMKERMSAWLLSVKLSFEKRGSRLSAVWTAENVIKIF
NMGTDLTKPFEYLLATGNLSSKTGLGMIQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAICEIVAPTLLTTSLPALLCSLGVT
PVDGTPGKAYADCYPVLLDGAVVGWVEAELAPVVVDSLRMFKVLKEKKIPPWTEIVLVPK
TGKASMYPGVFLFTTPCRMVRPVRNLALGKQELIGTFEQLYINVGIMEDEIEPGVTTHQE
LFPHSMLSVVASFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFLDRSDNKLYRLQTPQSP
MVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LAEKVRGEDSVVFGVKPGDPKVNDKLDADGLPFIGSTLQYGDPFYGYINLNTGQTFVNFY
KSQEACVVDNIKVCSNDTGTGRLKRICITMRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMAPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEESSALEY
FGEMLRAGGYNYYGTERLYSGVSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPYWSSMRNRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDIK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggactcctcaacaaagtggaataatttacctaaagctccgagtctaaagaacctgaca
gagaggggcttcgggatcctgaacgagactcagcatgccgcggtgcaggacctgaccaaa
gcccacatcgagtccttcgaccaggctctgactgatggactgagccgcgtcgtgcaggcc
atccctcccttggagttcacgttcaggaatgacaggatcagcttggcgtttgtggaggcc
accctctacagcccggtggtcgccaagggcaacatctgcagggagatgaaggtgtttcct
gctgagtgcagggggaggagatgcacatacaaagggaagctagtggcggacgtcagctgg
tcaatcaacggaatccccaaaggcatcatcaaacagtccatgggtcaggtgcccatcatg
gtgaagtccaagctgtgcaacctgcacggcttgtcccccaaaaagctggtggagcaccat
gaagaatcagaggaaatgggaggctatttcattgtaaatggaaatgagaaggttatccgt
atgctcatcatgccgaggaggaactatcccatcgccatgtcgagacccaagtggaagagc
agggggcaaggatacactcagtatggtatttcaatgcgctgcgtgaaggaagagcacacg
gccgtcaacatgaaccttcactatctggaaaacgggacggtgatgctgaacttcatctac
cagaaagagctcttcttcctcccactaggctttgctcttaaggccctggtggactttact
gactttcagatataccaggagctgatcaagagccgcgaggacaattcattttacaaaagc
tgtgcatcggagatgctgcgcatggtcatggaggaggggtgcaccacccgcagcaaggtg
ctgaactacctgggggagcgcttcagggtgaagatgaacctgccggagtggtacacaaac
gaccagtgtgccaactacctactggacgagtgcatctgtatccacctgaagtcgggcatg
gagaagttctacctgctgtgtctgatgaccaggaagctcttcacgttcgccaagcaggag
tgcatggaggagaaccccgacagcatcatgtgtcaggaggtgctcacccctgggcagctc
tacctcatgttcatgaaggagaggatgtctgcctggttgctgtctgtgaagctctccttt
gagaagagaggcagcagactgagcgcagtgtggaccgctgaaaacgtgatcaagatattc
aacatgggcacggacctgaccaaaccctttgagtatctgctggccaccgggaacctgagc
tccaagacaggtctgggcatgatacagaacacaggcctgtgcgttgtagctgacaaactg
aacttcatccgctacctgtcccacttccgctgcgtgcacagaggagcagccttcgccaag
atgaggaccacttcagtccgaaagctgctccccgagtcctggggcttcctgtgtcccgtg
cacactccggatggggagccctgcggactcatgaaccacatgacggccatctgtgagatc
gtggcgccgaccttactcaccacatccctccctgccctgctctgctccctcggtgtgact
ccggtggatgggaccccgggtaaggcgtacgcagactgctaccccgtgctgctggatgga
gctgtggtaggctgggtggaggcagagctcgccccggtggtggtggactctctgcgcatg
ttcaaggtgctgaaagagaagaagatccctccttggactgagatcgttctggttcctaaa
acaggaaaggccagcatgtacccgggcgtgttcctcttcaccaccccctgccggatggta
cgacccgtacgcaacttagctctgggcaagcaggagctgatcggcacctttgaacaactt
tacatcaatgtgggcatcatggaggatgagatagagccgggggtgaccacgcaccaggag
ctcttccctcacagcatgctcagtgtggtggccagcttcatcccatactccgaccacaac
cagagccccaggaacatgtaccagtgtcagatgggtaagcagacgatgggtttccccctg
cactccttcctggatcgctccgacaacaagctgtaccggctgcagacccctcagagcccc
atggtgcggccctacatgtacgaccactacaacctggacaactacccgagcggtaccaac
gccattgtggccgttatttcctacacaggctacgacatggaggacgccatgatcgtgaac
aagtcgtcctgggagagaggcttcgcccacgggagcatctacaagactgagctggtggac
ctggcagaaaaagtgcggggagaagacagcgtggtgttcggggtcaagcccggggaccct
aaagtcaatgacaaactggacgctgatggactgccattcattggatccactctacaatac
ggagacccgttctacggctacatcaacctgaacaccggccagaccttcgtcaacttctac
aagagccaggaggcgtgcgtggtggacaacataaaggtctgcagcaacgacacgggcacg
ggccgcctcaaacgcatctgcatcaccatgcgggtgccacgaaacccgaccatcggcgac
aagttcgccagccgccacggtcagaagggcatcctgagccgtctgtggcccgccgaggac
atgcccttcacggagagcggcatggcccccgacatcctgttcaacccgcacggcttcccc
tcccgcatgaccatcgggatgctcatcgagagcatggcgggcaagtcgggcgccctgcac
ggcctgagccacgacgccacgcccttcaccttctccgaggagagctccgcactggagtac
ttcggggagatgctccgagcgggcgggtacaactactacggcaccgagcggctctacagc
ggtgtgagcgggctggagctggaggcggacatcttcatcggggtggtctactaccagcgg
ctgcgtcacatggtctcagacaagttccaggtgaggacgacgggagcgcgagacaaggtg
accaaccagccggtgggggggaggaacattcagggaggcatccggttcggggagatggag
cgagacgccctgctggcccacggctcgtccttcctgctgcacgaccgcctcttcaactgc
tccgaccgctcggtggcgcaggtgtgtgtcgactgcggcagcctgctctcccccctccta
gagaaacctcccccctactggtcgtccatgcgtaaccgcaagactgtctgcaccctgtgc
gggaaaagtgactccatcgactcggtgtcggttccatacgtcttccgctactttgtcgcc
gagctagcagcaatgaacatcaaagtcaagttggatattaagtga
DBGET
integrated database retrieval system
