Gymnodraco acuticeps: 117551257
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Entry
117551257 CDS
T09661
Name
(RefSeq) nucleoporin p54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117551257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117551257
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117551257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
117551257
NCBI-ProteinID:
XP_034079948
UniProt:
A0A6P8UV76
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MAFSFGGAAANPAATLTAPGFGAAPTAAAAPATGFSFGSTNTGFGGLGAGNTTAGTFGGF
GAAAATAPAPGSTFSFSTPANTTGGLFGNTQNKGFGFSSGLGTAAPAGATGFGTGLGTTT
LGGFGGFNIQPTQQQTGGLFGQPAQQQAQQQAQAQTTQLYQQVTALSAPTLLGDERDTIL
AKWNQLQAYWGTGKGYYSNNNQPVDFTQENPFCRFKAVGYSCVPVSKDEDGLVALLLNKK
EADVRAQQQQLVETLHKVLGSNQSLTVNVDGVKALPNDQTEVIIYVVERSPNGTSKRIPA
TTLFSYLEQGNIKAQLASIGVAMSGTRTELSPAQLKQLLQNAPAGVDPIIWEQAKVDNPE
PDKLIPVPMVGFKELLRRLQFQEQMTKQHQTRVDIISGDISELQKNQATTVAKIAQYKRK
LMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNAPTQFKGRLNELMSQI
RMQNHFGAVRSEERYSVDADLLREIKQHLKQQQDGLSHLISVIKDDLEDIKLIEHGLSDS
GHMRGSILS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggcgcagcggctaaccctgcagcaactcttacagctcctggt
tttggggcagcccccaccgctgctgctgcaccagccacaggattcagttttggctccacc
aacactggatttggggggctgggagctggaaacaccacggctggtacgtttggtggcttt
ggggcagctgcagcaactgcacctgcaccaggatccacttttagctttagtactcctgcc
aacaccacaggaggcctgtttggtaacacacagaacaaaggttttgggttctcctctggg
cttggtaccgcggctcctgctggggcaacaggatttggaactggattaggaacaacaacc
ctgggagggtttggaggttttaatatccagcccactcagcagcagacaggaggcttgttc
ggtcagccggcccagcagcaggcccagcagcaggctcaggctcagaccacccagctgtat
cagcaggtcactgctctgtcagcccccaccttgttaggagacgaacgtgacaccatctta
gccaaatggaaccagttacaggcttactggggaactgggaagggctactacagcaacaac
aaccaacctgtcgacttcacgcaggagaacccattctgcaggttcaaggcggtgggctat
agctgtgtcccagtgagtaaggatgaggacggtttagtggccttacttctcaataaaaag
gaagctgatgtgcgagcgcagcagcagcagctggtggagactcttcacaaagtcctggga
agcaaccagtctctcactgtcaatgtggatggtgtcaaagccctgcccaatgaccagact
gaggtgatcatttacgtggtggagcgttctcctaatggcacctccaagcggatccctgcc
accacactcttcagttatctggagcagggcaacatcaaggcccagctcgcatcgatcgga
gtggccatgtctgggacgcgcacagagctgtctccagctcagctcaaacagctgctgcag
aatgcacctgcaggagtggaccccatcatttgggagcaggctaaggtggacaaccctgag
ccagacaaactaataccagtgcccatggtgggtttcaaggagctccttcgcaggctgcag
ttccaggagcagatgaccaaacagcaccagaccagagtggatattatttccggtgacatt
agtgaactgcagaagaaccaggcgacaacagtggccaagattgcgcagtacaagaggaag
ctgatggatctctctcacagggtgctgcaggtgctgatcaaacaggagatccagagaaaa
agtggctatgctatccaagtggacgaggagcatctcagagttcaactggataccattcag
tctgagctgaatgcgcccacgcagttcaagggtcggttgaatgaattaatgtctcagatc
aggatgcagaatcactttggagctgtgagatcagaagagcgatacagtgttgatgcagac
ctcctcagggaaatcaaacaacacttaaagcagcagcaggacgggttgagtcatttgatc
agtgtcatcaaagatgacttggaggacattaaactcatagagcacggcctgagtgacagt
ggacacatgagaggaagcatcctgagctga
DBGET
integrated database retrieval system