Gymnodraco acuticeps: 117551289
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Entry
117551289 CDS
T09661
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117551289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117551289
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117551289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
AF-4
Motif
Other DBs
NCBI-GeneID:
117551289
NCBI-ProteinID:
XP_034079990
UniProt:
A0A6P8V3W5
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MASSPDSHTLTELSRTLQVSVPSQENYKSPPANPSQLIQQSSSSSLEAAHSRGVEPASSS
DSECSSRSEWESESTIEEPPPPPVSISVKTEHSLYSCEGTSGFSFGAKTTAPTATFGFGS
AAAAAASFGFGSKSIDPMVTKEALTAPGFGAAPTAAAAPATGFSFGSTNTGFGGLGAGNT
TAGTFGGFGAAAATAPAPGSTFSFSTPANTTGGLFGNTQNKGFGFSSGLGTAAPAGATGF
ETGLGTTTLGGFGGFNIQPTQQQTGGLFGQPAQQQAQQQAQAQTTQLYQQVTALSAPTLL
GDERDTILAKWNQLQAYWGTGKGYYSNNNQPVDFTQENPFCRFKAVGYSCVPVSKDEDGL
VALLLNKKEADVRAQQQQLVETLHKVLGSNXTVNVDGVKALPNDQTEVIIYVVERSPNGT
SKRIPATTLFSYLEQGNIKAQLASIGVAMSGTCTELSPAQLKQLLQNAPAGVDPIIWEQA
KVDNPEPDKLIPVPMVGFKELLRRLQFQEQMTKQHQTRVDIISGDISELQKNQATTVAKI
AQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNAPSSSRVG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctctcctgacagccatacactcaccgagctcagtagaaccctccaagtctcc
gttcccagccaagaaaactacaagtcccctccagcaaatccatcccagctcatccagcag
agctcatcatcttcacttgaagcagcacattcccgaggggtagagccggccagctccagc
gactcagagtgtagctcaagatcagagtgggaaagtgaaagcaccatcgaggagccgcct
ccaccccctgtgagcatctctgttaaaaccgagcactctctatattcatgtgaaggcacg
tccgggttttcatttggtgccaaaactacagcaccaactgcaacatttggctttggctca
gcagccgccgccgccgcctcattcggatttggcagtaagtccatagatccgatggtcact
aaagaggctcttacagctcctggttttggggcagcccccaccgctgctgctgcaccagcc
acaggattcagttttggctccaccaacactggatttggggggctgggagctggaaacacc
acggctggtacgtttggtggctttggggcagctgcagcaactgcacctgcaccaggatcc
acttttagctttagtactcctgccaacaccacaggaggcctgtttggtaacacacagaac
aaaggttttgggttctcctctgggcttggtaccgcggctcctgctggggcaacaggattt
gaaactggattaggaacaacaaccctgggagggtttggcggttttaatatccagcccact
cagcagcagacaggaggcttgttcggtcagccggcccagcagcaggcccagcagcaggct
caggctcagaccacccagctgtatcagcaggtcactgctctgtcagcccccaccttgtta
ggagacgaacgtgacaccatcttagccaaatggaaccagttacaggcttactggggaact
gggaagggatactacagcaacaacaaccaacctgtcgacttcacacaggagaacccattc
tgcaggttcaaggcggtgggctatagctgtgtcccagtgagtaaggatgaggacggttta
gtggccttacttctcaataaaaaggaagctgatgtgcgagcgcagcagcagcagctggtg
gagactcttcacaaagtcctgggaagcaacnncactgtcaatgtggatggtgtcaaagcc
ctgcccaatgaccagactgaggtgatcatttacgtggtggagcgttctcctaatggcacc
tccaagcggatccctgccaccacactcttcagttatctggagcagggcaacatcaaggcc
cagctcgcatcgatcggagtggccatgtcggggacgtgcacagagctgtctccagctcag
ctcaaacagctgctgcagaatgcacctgcaggagtggaccccatcatttgggagcaggct
aaggtggacaaccctgagccagacaaactaataccagtgcccatggtgggtttcaaggag
ctccttcgcaggctgcagttccaggagcagatgaccaaacagcaccagaccagagtggat
attatttccggtgacattagtgaactgcagaagaaccaggcgacaacagtggccaagatt
gcgcagtacaagaggaagctgatggatctctctcacagggtgctgcaggtgctgatcaaa
caggagatccagagaaaaagtggctatgctatccaagtggacgaggagcatctcagagtt
caactggataccattcagtctgagctgaatgcgcccagcagttcaagggtcggttga
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