Gymnodraco acuticeps: 117551426
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Entry
117551426 CDS
T09661
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gacu03009
]
117551426 (ddx21)
03036 Chromosome and associated proteins [BR:
gacu03036
]
117551426 (ddx21)
Enzymes [BR:
gacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117551426 (ddx21)
Ribosome biogenesis [BR:
gacu03009
]
Eukaryotic type
Pre-60S particles
Helicases
117551426 (ddx21)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117551426 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117551426
NCBI-ProteinID:
XP_034080218
UniProt:
A0A6P8UW91
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MPTKIIFESEDQVMEDDVDTVAEAKPIKKTKEGKKLKKKQLEDQEEQEDLDCEPPAPKKK
KKKDKLDQSIGHVVEDTGMNGICDDVETPKKIKKKKTPEEITEKKEKKHKKAEAVTNGHS
SPNTPVQTPIPTPAHSSDDSASDGEKDTGLTPQQKAGAFSNFRISQVTIDKLKARGVTYL
FDIQSKTFNSVFDGEDVIAQARTGTGKTFSFAVPLVEKLQRDPVDSARGRAPKVLVLTPT
RELAIQVAKDFKDVTKRLSLTCFYGGSSYNPQIEAIRNGIDILIGTPGRIKDHLQNQKLD
LSKLKHVVLDEVDQMLDMGFTEQVEEILSSSYEKDSPSNPQTLLFSATCPAWVYQVAKKY
MRPECKHVDLIGKSTQKAATTVEHLAIACHWSQRAAVIGDVIQVYSGTHGKTILFCETKK
DANEYSLDASIKQSCQALHGDIPQKQREITLKGFRNGVFEVLVATNVAARGLDIPEIDLV
IQCSPPKDVESYIHRSGRTGRAGMTGVCICFYQRKEEDQLRYVENKAGITFKRVGVPTAN
EIIKSSSKDAVKLLDSVPVTAIGYFKASAEKLIEERGAVDALAAALAHISGATNLEQRSL
LNSDAGFVTMQMVCSQEMHNLGYAWKSIKEQLGENFEQHVRGMTFLKGKLGVCFDIPADK
VKEMQDGWKDGRRWQLTIAMELPDLEEKQMNNRGDRGYGGGNRGGGGFRGGRGRGFGGGG
GRGGGFRSGGGGGFSSARGTHKRDFSEAFDY
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaaaaatcatctttgagagtgaagatcaagtcatggaggacgacgtggacact
gtcgcggaggctaaacccatcaagaagaccaaagagggcaagaagctgaagaagaagcag
ttggaggaccaggaagagcaggaggacctcgactgtgaacctccagcaccaaaaaagaaa
aagaaaaaagacaagttggaccaatcgatcggacacgtagttgaagacacaggaatgaac
ggcatctgtgatgatgttgaaacaccaaaaaagattaagaaaaaaaaaacacctgaagaa
atcacagagaaaaaagaaaagaagcataagaaagcagaggcagtaaccaacggacattcc
tcccccaacacccccgtccagacgcccatcccgacaccggcccattccagcgacgactca
gccagcgacggcgagaaagacacggggttgacaccgcagcagaaggcaggcgccttctcc
aacttcaggatctcccaagtgaccattgataaactaaaagctcggggtgtcacctacctg
tttgacattcaatcaaaaacatttaattctgtctttgatggagaggacgtaattgcccaa
gcccgaacaggaacaggaaagactttctcgtttgccgtccctttggtggagaagctccag
agagacccagtggattctgccagaggccgggctcccaaggtcctggtgttaactccaacc
agagagctcgctatccaggttgctaaggacttcaaagacgtcaccaagagactttctctc
acctgtttctatggaggcagctcgtacaatccacagattgaagcaatacgtaatggtatc
gatattttgattggcacccctggtcgcatcaaagaccatctccagaaccaaaaactggac
ctctccaaactgaaacacgttgttctcgatgaagtggaccagatgttggacatgggtttt
actgaacaggttgaagaaattttgtcttcatcatatgagaaagactccccctccaacccc
cagactcttctcttttcggccacctgccccgcctgggtataccaggttgccaagaaatac
atgagaccagaatgcaaacatgtggatctgatcggcaagagcacacagaaagccgccaca
actgtagagcatctggccatagcgtgccactggtctcagcgagcagccgtgatcggtgat
gtgatccaggtttacagcggcacccatggcaaaaccatcttgttctgtgagacaaagaaa
gatgccaacgaatactccttagatgcatccatcaaacagagttgccaggccctccacggg
gatattcctcagaaacagagggagatcacgctgaaggggttcagaaatggcgtttttgag
gttctggttgccaccaacgttgcagcccgtggattggacatccctgaaatcgacctggtg
atccagtgttctccacccaaggatgtggagtcgtacatccaccgttcaggacgtacgggc
cgagcgggcatgaccggagtctgcatctgtttctaccagaggaaagaggaggaccagctg
cgctacgtggaaaacaaagcaggtatcacattcaaaagagtcggcgttcccactgccaat
gagatcatcaagtcatcaagcaaggatgccgtcaagcttctggactcggtcccagttaca
gccatcgggtacttcaaagcgtcggcggagaagctgatcgaggagagaggagccgtcgat
gcgctagctgctgctctggctcacatttctggagccacaaatctagagcagcggtcactg
ctaaactctgatgctggtttcgtcactatgcagatggtgtgttctcaggagatgcataat
ctcggttacgcctggaaaagcatcaaagaacagcttggggagaatttcgagcaacacgta
cgaggaatgaccttcctcaaaggcaaattgggagtttgttttgatatcccagctgacaaa
gtcaaggagatgcaggatggctggaaagatggtcgtcgttggcaactgactatagccatg
gagctcccagatttggaggagaagcagatgaataaccgtggtgatagagggtacggcggc
ggtaaccgaggaggaggaggctttagaggcggaagggggcggggcttcgggggaggcggc
ggccgaggcggtggcttcaggagcggcggcggtgggggctttagcagcgccagaggaaca
cacaaacgtgacttcagtgaagcttttgattattga
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