Gymnodraco acuticeps: 117551965
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Entry
117551965 CDS
T09661
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gacu01001
]
117551965 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gacu04054
]
117551965 (ciita)
Enzymes [BR:
gacu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117551965 (ciita)
Protein kinases [BR:
gacu01001
]
Serine/threonine kinases: Other
TAF1 family
117551965 (ciita)
Pattern recognition receptors [BR:
gacu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117551965 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
LRR_8
nSTAND_NTPase5
AAA_16
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
117551965
NCBI-ProteinID:
XP_034080951
UniProt:
A0A6P8UVP8
LinkDB
All DBs
Position
Unknown
AA seq
1683 aa
AA seq
DB search
MKQFFEYTSPSTAQTPASFNGNAPWTKSLYPLVKKTLYSIIYPSSLFKDINVRGEDGAAM
AQFEEVLDRVQEALTRSSPAEICALFQHLVKDQIISEAYGKSLGLYQLSDKMAPKPKSDL
MSSQGSTSHWTLNQGQLSQVRKSDPYQTGFEFEPSVAEHDCSGPRPTIDPLYEHQGNNPK
IIQELGGGPVMDKHYLNHRLSSTSIISDYQCGFRSDNRMKELLRGAERMQKPLGETDIID
EGNLEDEKEWLEQVEEAARRIAVPLWQHWDRGRRILLPLVPGMTAGCATGENTTKNREAQ
CHVFNMEEETELAIACRTLDLYCDSFNCTEADSRFTLDNEGATGTAESPYFSTYDSVATT
DLNQFFTYETRREVSPDVDVCRAADRSTKDLLCSMGDGQWGMDTGFTEDITHVFSPCTLT
DTHTDAQDHSFYSNTDQSMTLDMFNDAENVLKTACDACLHWNKEDEEEVDSHCAGAKMQE
MEQDPFVCPFDLADDLSKILTDDFLGIGDPNLDTEGFFDDPLFNCVEELSTCTDLPMMTE
PFPDIQQQGEEVKTTGKTKSRSKRPRAPRIQQCPDQDTPSRPKRQRAAAQPKTKVVQAEL
SITQATGSEPSSAETAGLSTTPPRILHLHPSIQFITIPDTPSCQVVRSLRLSPSVITLPI
TNTAATPTYIFVPAGSPQFKPQVPPLSPTNGEVAPVQMSSSPRGSLSDTASKALTHPCAS
PLSPGNEPSTCKQSPLPQCPTPLDIPQDVKDYIQEAKAHMSQACQVMEAGLSLTSHYVDV
PVSQREILHSGKNINKALDKEIVIMGDTDRQKSLLGRSQIFVRSNGDKPKRYILLLGNAG
MGKTTLIRRLCLDWSTDCIPQFDFLFLLDSKALSLTDATFSLQTLLLNLSSFAPTCKDPN
AVYAQILAAPKRVLVIFDGFCELRDYEILLQTQEKDLVTSLQKDSKAQTFTVKQLYSAIL
QRVLLPGCTLLLSTRTRGTASQLLRRTDSLLEVCGFTPTDVQIYLSQYFTDPDLRVSALD
CFKNCSYLHLLCWNPGLCRLVCLVLEQCKSLEVLPRTLTELCHQVLRMKVEKDSKDTNSQ
AETPSEISEKSVEETQTKSSSSSQMKRRNKSTHTQRTRGSKKQEKDDKDGEEMKSNGWEA
VKTQERELLAQLSSLAWEGIKANSSIVPKGRTISAKLKAFGQRTGLLLSYNLGTRQVVSS
CESEDRRKTGTRETGEKRGSKGRKETENADASDDQILMWANPFLQSYLAGVHLSLSRTIT
DRAFLQTLPFQSGQKGRRRPQREELDLTQRFAVGLLFYNRRELQRFHSYTETTFRDMVAS
KQALVTTHLEGLSHDDLSPAQVLEACRYVYEASSSHGDGSRDSGSQRLVAHLAENLPEVL
TFHGVPFKPSDVFAVQNVLDQGGADGRRFCLNLEDSGIQISGLRALLGLNNINTYRACIA
DVITLWEQLEQSGEEALLQVTVSKFKVHPLKATQVCHIEHLAKLVNIHVHKRLSDSSSQC
DSILAEGVPAVKELHKLELELGPEKGPLVLPKLWELLPGLHNLQHLDLENSTIGDKGAEE
LADTLVSLGSLEILNLSQNCIGDQGVRKLATVLRDLPKLHCLSLYSNVICDEGAETLAAV
LPHMASLTDLDVKYNKLTSVGAQSLGASLRNCRKIKTLRMWNQCIPYGVFERLQQQDNRI
QWQ
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattctttgaatacacctccccttcaaccgcacaaacacctgcctcttttaat
ggtaacgccccctggacaaaatcattgtatcccttggtaaaaaaaacgttatactcaatc
atctacccaagctctctctttaaagacatcaatgtccggggagaagacggtgccgccatg
gcccagttcgaggaggttctggacagagtgcaggaagctctgactcggtcctctcctgct
gagatctgtgctctattccaacatttggtgaaggaccagatcatctccgaggcctatggc
aagagcttgggcctgtaccaactttctgacaagatggcacctaaaccaaagtctgatcta
atgagttctcaagggtctacctcccactggaccctcaaccagggtcaactcagccaggta
aggaaatctgacccttaccagacaggatttgagtttgaaccgtcagtggctgaacatgac
tgctcaggacccaggccaactattgatccactttatgaacatcaagggaataatccaaag
attattcaggaactgggtggggggccagtgatggacaaacactacctcaaccacaggctc
tcttctacatcgataataagtgactatcaatgcggtttcagatcagacaatcgaatgaag
gaactgctgagaggtgcagaaagaatgcagaagccattaggtgaaactgacataatagat
gaggggaatttggaggatgagaaggagtggttagagcaggtagaggaggcggcgagaagg
atagctgtccctctgtggcagcactgggacagaggacggaggatcttgctgccactggtt
cctggtatgactgctggctgtgcaaccggagaaaacacaacaaaaaacagagaagcacag
tgccatgttttcaatatggaagaggagacggagcttgcaatcgcttgcaggactttagat
ttgtactgtgacagctttaactgtacagaggcagactcaagattcacactggacaacgaa
ggagccactggcactgcagaaagtccgtatttctctacatacgacagcgtagcgacaact
gatttgaaccagttctttacctatgaaacaagaagagaagtctcacctgatgtcgatgtc
tgccgggcagctgacaggtcaacaaaggatctgctctgttcaatgggagatggacaatgg
ggcatggacacaggatttacagaagatattacacatgtattttctccctgtacacttaca
gacactcacaccgacgcacaagaccactcgttttactccaacacagatcagagcatgaca
ttagatatgttcaacgatgcagaaaatgttttaaagactgcttgtgatgcttgcttgcat
tggaataaagaggatgaggaggaggtggattcacactgtgcaggtgccaagatgcaggaa
atggaacaggacccgtttgtatgtcctttcgatctagcagatgatttatctaagatcttg
actgatgacttcctggggataggggatcctaacctcgacactgaggggttctttgacgat
ccactgtttaattgtgtggaggaactcagcacctgcactgatcttcccatgatgacagag
cccttccccgacatccagcagcagggagaggaggtcaaaacaacaggcaaaacaaaaagc
agaagtaaaagacccagagctcctcggatacaacagtgccccgatcaggacacaccatct
aggccaaagagacaaagagcagcagctcaaccaaaaactaaagtggtgcaggctgagctg
tcaatcacccaagccacaggatcagagccaagttcagcagagacagctggcctctccacc
actccaccaagaatcctccatctccatccctccattcagtttatcaccatcccagacact
ccatcatgtcaggttgttcggagcctgaggctctctccttcagtaattacacttccaatc
accaatactgctgccacacctacttacatatttgttcctgctggatcaccgcaattcaaa
cctcaagtgccacccctctccccgacgaatggtgaagtagctccagtccaaatgagttca
tccccacgaggatctctgtcagacaccgcaagcaaagccttaactcatccttgtgcctca
cccctctcacctggcaatgagccgtctacgtgtaagcaatcccctcttcctcagtgtccc
acgccccttgatattccacaggatgtgaaggactacatccaggaagccaaagcccacatg
agtcaagcatgccaggttatggaggctggcctcagcctgacgtctcattatgtggatgtg
ccagtgagccagagggaaattcttcactctggaaaaaacataaacaaagccctggacaaa
gagatagtcatcatgggagatacagatcgacaaaaaagcttgttggggaggagtcagata
tttgtgagatcaaatggagacaaaccaaaacgctacattttgcttctaggcaatgctggc
atgggaaaaaccaccctgataagaagactgtgtctcgactggtccacagactgcatccca
cagtttgactttctcttcttgttagacagcaaggcactctctttaacggacgctaccttt
agccttcagaccctcttactaaacctctcctcctttgcccctacctgcaaggaccccaac
gcagtgtacgctcaaatccttgcagcccctaagcgcgtgcttgtcatttttgatgggttt
tgcgagttgcgggactatgaaattcttctccagactcaagaaaaagacttagtaacgtcg
ttacagaaggacagtaaagcacagaccttcacagtaaaacagttgtactctgccatcctt
cagagggtcctccttccaggatgcacacttctgctttctacccgaacgagaggcacagcc
agccagcttctccgccgaacggacagccttttggaggtgtgtggtttcacccccactgac
gtacagatatatctgtcccagtacttcactgatcctgacctcagagtatctgctttggat
tgcttcaaaaactgcagctatctacatctcctgtgctggaaccctggactttgtcgcttg
gtctgcttggttttagaacaatgcaaaagtttggaggtcctaccgagaacgttaaccgag
ctctgccatcaagtgcttcgtatgaaagtggaaaaagacagtaaggacacaaactcacag
gctgaaactccatcggaaatatctgagaaatcagttgaagaaacccagacaaaaagctca
agtagttctcaaatgaagaggcgtaataaaagcactcacacacaaagaacaaggggttca
aaaaaacaggagaaagatgacaaagacggagaggaaatgaagagtaatggctgggaagca
gtcaaaacccaggagagggagttgctggcccagctaagttctctggcctgggaggggatc
aaagcaaactcttccatcgtccccaaaggacggaccatatctgcaaaactcaaggcgttc
ggccaaagaacagggctcttactctcttataatctggggacgaggcaggttgtctcaagt
tgtgagagtgaggacagaaggaaaactggaacaagagagactggagaaaagaggggaagc
aagggaaggaaggaaactgaaaacgctgatgccagtgatgaccaaatcctgatgtgggcc
aaccctttccttcagagttaccttgcaggggtccatttgtctctgtcaaggacaataaca
gaccgtgccttcctccagaccctccctttccaatctggccagaagggtcgccggcggcct
caaagggaggagctcgatctgactcagcggtttgcggtcgggctgttgttctacaaccgg
agagagcttcagaggtttcactcatacacagagacaaccttcagggacatggtggcctct
aagcaggctttagtgacaacacaccttgaaggtctttcccatgatgacctgagccccgcc
caggtcctggaggcttgtcgctatgtttatgaggcgagttcctcacatggtgatggtagc
agagacagtggtagtcaacgattggttgctcatctggcagagaatcttccagaggtcctg
acatttcacggagttccttttaagccatcggacgtgtttgctgtgcagaacgttctcgac
cagggtggagctgacggtagaaggttttgtttgaatctggaggattctgggatacagatt
tcgggactcagagctctgttggggctcaacaacatcaacacatacagggcatgcattgct
gatgtgatcaccttgtgggagcagctagagcagagcggtgaagaagcgctcctacaagtg
acggtgtccaaattcaaggtccaccctctgaaagccacacaagtgtgtcacatagagcac
ctggcgaagctggtgaacatacatgtgcacaagaggctgtcagacagttccagccaatgc
gattcaatcctggcagagggggtaccggcagttaaagagctacacaagctagagttagag
cttggtccagagaaaggtcccctggttcttcccaagctatgggagctcctgccaggtcta
cacaacctacagcacttagatctagagaacagtacgattggggacaaaggagcagaggaa
ttggcggatactttagtctcacttgggtccctggagattctcaatttgtcacagaattgc
ataggagaccagggggtgaggaaactggcaactgtgctgcgggatcttcccaaactgcac
tgtttaagtctctacagtaatgtgatttgtgacgaaggtgcagagactctggctgctgtc
ctcccacacatggcttcgctcactgacctggatgtcaagtacaacaagctaacaagtgtt
ggagcacagagcctgggagccagtctgagaaactgtagaaaaataaagaccttgaggatg
tggaaccagtgtattccttacggcgtgtttgagagacttcagcagcaggacaacaggatc
cagtggcagtag
DBGET
integrated database retrieval system
