Gymnodraco acuticeps: 117552112
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Entry
117552112 CDS
T09661
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03030
DNA replication
gacu03410
Base excision repair
gacu03420
Nucleotide excision repair
gacu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117552112 (rfc5)
03410 Base excision repair
117552112 (rfc5)
03420 Nucleotide excision repair
117552112 (rfc5)
03430 Mismatch repair
117552112 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gacu03032
]
117552112 (rfc5)
03036 Chromosome and associated proteins [BR:
gacu03036
]
117552112 (rfc5)
03400 DNA repair and recombination proteins [BR:
gacu03400
]
117552112 (rfc5)
DNA replication proteins [BR:
gacu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117552112 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
117552112 (rfc5)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117552112 (rfc5)
DNA repair and recombination proteins [BR:
gacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117552112 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
117552112 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
RuvB_N
AAA_24
AAA_22
AAA_14
AAA_16
DUF815
DEAD
ResIII
AAA_assoc_2
AAA_7
ATPase_2
TIP49
PhoH
AAA_5
AAA_19
AAA_30
AAA_2
nSTAND3
DNAX_ATPase_lid
Mg_chelatase
AAA_3
Thioredoxin_6
Motif
Other DBs
NCBI-GeneID:
117552112
NCBI-ProteinID:
XP_034081239
UniProt:
A0A6P8UU40
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MSSSSKLPLQSRNLPWVEKYRPQKLDDLISHKDILSTIQKFISEEKLPHLLFYGPPGTGK
TSTILACAKQLYKDKEFTSMVLELNASDDRGIDVVRGPVLSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKYTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EYVVQQESIDINPGGMKAIVTLSSGDMRRSLNILQSTSMAYGKVTEDTVYTCTGHPLRSD
IANILDWSLNKDFTSAYKQILQLKTLKGLALHDILTEIHLLIHRVDFPPAIRIGLLIKLA
DIEHRLASGTNEKIQLSSMVAAFQGVRDIVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcaagtaaactgccgttacagagcagaaacttaccatgggttgaaaaatac
agaccacagaagctcgatgatctgatctcacacaaagatattctaagcaccatccagaag
tttatcagtgaggaaaagcttccccatctcctgttctatggccctcctggaacaggaaaa
acttccaccatcctggcctgtgccaagcagctgtacaaggacaaagagttcacctccatg
gtgttggagctaaacgcatcagatgacagaggtatagatgttgtacgcggtcctgtcctt
agttttgcgagcaccaggaccatcttcaagaagggcttcaagttggtgatactggatgag
gccgatgccatgacccaggatgcccagaatgcattgcggcgagtgattgagaagtacaca
gaaaacactcgattctgtctgatctgcaactacctgtccaagatcatcccggctctgcag
tctcgatgcaccaggtttcgcttcggcccgctgtccccagaccagatgatccctcggctg
gagtacgtggtccagcaggagagtatcgacattaatccaggtggaatgaaggccattgtg
accttatcatcaggcgatatgagaagatcgctcaacatactgcagagcaccagcatggcg
tacgggaaggtgacagaggacacggtgtacacctgcacaggtcaccccctccgctcagat
atagccaacatcctcgactggtcgctcaacaaagacttcacctcagcgtacaagcaaatc
cttcagctgaagactttgaagggtttggccctgcatgatattctcactgagattcatctg
ctcatacacagagtggattttcctccagctattcggattggtctgctcatcaagttggct
gacattgaacacaggctcgcctcagggaccaacgagaagatccagctgagctccatggtg
gcagctttccaaggcgtgagagacatcgtggtcagcgaggcctcttag
DBGET
integrated database retrieval system
