Gymnodraco acuticeps: 117552202
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Entry
117552202 CDS
T09661
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117552202 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gacu03041
]
117552202 (prpf8)
Spliceosome [BR:
gacu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117552202 (prpf8)
Complex C
U5 SnRNP specific factors
117552202 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
117552202
NCBI-ProteinID:
XP_034081420
UniProt:
A0A6P8V785
LinkDB
All DBs
Position
Unknown
AA seq
2338 aa
AA seq
DB search
MAATFPYRGVPGGMPPGVPPPIPVPDYMSEEKLQEKARKWQHLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDNEEDSPVAEWLYDHQPLKDANKFVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHYVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPLLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
PTESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPMEFYHEVHRPSHFLNFASLQEGEVYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccttcccctacagaggggtccctggagggatgccaccgggtgttccccct
cccatacctgtcccggactacatgtctgaggaaaagctgcaggagaaagcaagaaaatgg
cagcacttgcaggcaaagcgctactcagaaaagagaaagtttggctttgtggatgcccag
aaggaagacatgccacctgagcatgtccgcaagatcatcagggaccatggagacatgacc
aacagaaagtttcgccatgacaagagggtgtacctcggtgccctcaagtacatgccccat
gcagtgctgaagctgctggaaaacatgcctatgccctgggaacagatcagagacgtgcct
gtcctctaccacattaccggagctatttcctttgtgaatgaaatcccttgggtcatagag
ccggtctacatcgcacagtggggcactatgtggatcatgatgcgacgtgagaagcgtgat
cgtcgtcacttcaagcggatgcgatttcctccatttgatgatgaggagccgccgctggat
tatgcagacaacatccttgatgtagaaccactggaggcgatccagatggagctggacaat
gaggaggactctcctgttgcagagtggctctatgatcaccaacccctcaaagacgcaaac
aagtttgtgaatggcaccacctaccgtcgctggcagttcacactgcctatgatgtccacc
ctgtaccgcctggccaatcagctgctcacagacctggtggatttcaactacttctatctg
tttgacctcaaggccttcttcacttccaaggccttgaatatggccatccctggaggaccg
aagtttgagccacttgtcagagacatcaaccttcaggatgaagactggaatgagttcaat
gacatcaacaagatcatcatccgacagcctatcaggacagagtacaaaatcgctttcccc
tacttgtacaacaacttgccgcactatgtccacctaacctggtatcatacacccaacgtg
gtgttcatcaagacggaggatccagatctcccagcgttctacttcgacccgctgatcaac
ccaatttcccacagacactctgtcaagagtcaggaacctctgcctgatgatgacgaggag
tttgagcttccagagtatgtggagcccctcctcaaggagaccccactctacacagacaac
acagccaatggcatcgctctgctgtgggcaccgagacccttcaacctcagatctggccgc
acaaggcgtgccattgatatccccctgatcaagaactggtatcgtgagcactgccctgca
ggacagccagtgaaagtgcgtgtgtcctaccagaaacttctcaagtactatgtgctcaat
gctctcaaacacagaccacccaaagcccagaagaagaggtatctgttccgctccttcaag
gccaccaagttcttccagtccaccaagctggactgggtggaggtcggtctgcaggtctgt
cgtcagggttacaacatgctcaatctgcttatccatcgtaagaacctcaactacctgcat
ctggactacaacttcaacctgaagcctgtcaagacactgaccacaaaggaaagaaagaag
tcccgattcggaaatgccttccacctgtgcagagaggtgctgcgcctcagcaagctggtg
gtggacagccacgtgcagtacaggctgggaaatgttgatgccttccagttgtccgatggt
ctgcagtacatcttcgcccacgttggtcagctgactggcatgtaccgttacaagtacaag
ttgatgagacaaatccggatgtgcaaagatctgaagcatctcatttactaccggttcaac
actggtcctgttggcaagggcccaggctgtggcttctgggctcccggctggagggtgtgg
ctgttcttcatgagagggatcactccgctgttggagaggtggctgggaaatctgctcgcc
aggcagttcgaaggacgtcactcaaagggcgtagccaagactgtgaccaaacagcgcgtg
gagtctcactttgacctggagttgcgtgccgccgtgatgcatgacatcctggacatgatg
cctgagggcatcaaacagaacaaagccagaaccatcctgcagcacctcagtgaatcctgg
aggtgctggaaggccaacatcccctggaaggtgcccggcctgcccactcccattgagaac
atgatcctgcgctatgtgaaggctaaagctgactggtggaccaacactgctcactacaac
cgtgagcgaatccgccgtggagccactgtggataagacggtgtgcaagaagaacctgggg
agactgacccgtctgtacctgaaggctgagcaggagaggcagcacaactacctgaaggat
ggcccctatatcacagctgaagaggcggtggccatttacaccaccactgttcattggctg
gagagtcggcggttctcccccatccctttccctcccctgtcctacaaacatgacaccaag
ctgctcatcctggccctggagaggctcaaggaagcatacagtgtgaagtctcgtctgaac
cagagtcagagggaggagctgggtctgattgagcaggcttacgacaatcctcacgaggcc
ttgtccaggatcaaacgtcacttgctcacccagagagccttcaaagaggttggtattgag
ttcatggacttgtacagtcacctggtgcccgtgtatgatgtcgagcccctggagaagatc
acagatgcctacctcgaccagtacctgtggtacgaggcagacaagaggcgtctgttccca
ccctggatcaaaccagctgacactgaacccccaccactgctggtctacaagtggtgccaa
ggcatcaacaacttgcaggacgtgtgggagacggcggagggagagtgcaacgtgatgctg
gagtcccgctatgagaagatgtacgagaagatcgatctgaccctgctcaacaggctgctg
cgtctcattgttgaccacaacatcgctgattacatgacagccaagaacaacgtggtcatc
aactacaaggacatgaaccacacaaactcctacggcatcatcagaggcctgcagtttgcc
tcattcattgtgcagtactacggcctggtgatggacctgctggtcctgggtctgcaccgt
gccagtgagatggctggcccgcctcagatgcccaatgacttcctcagtttccaagacaca
cccacggagagcgcccacccaatccgattgtactgccgttacatcgaccgcatccacatc
ttcttcaggttctctgctgatgaggccagggatctgattcagaggtacctgacggagcat
ccagaccccaacaatgagaacattgtgggttataacaacaagaagtgctggccccgcgat
gcccgcatgagactgatgaagcatgacgtcaacctgggacgtgctgttttctgggacatc
aagaaccgcctgcccagatccgtcaccacggtgcagtgggagaacagctttgtttccgtc
tacagcaaagacaaccccaacctgctcttcaacatgtgcggatttgagtgccgtatcttg
ccaaagtgccgcaccagctacgaggagttcactcacaaggacggtgtgtggaacctgcag
aacgaggtaaccaaagagaggaccgcacagtgtttcctgcgtgtggatgacgaatcaatg
cagcgtttccacaacagagtgcggcagatcctgatggcctctggatccaccacattcacc
aagattgtgaacaaatggaacacggctctgattggtttgatgacgtacttccgcgaggct
gtggtcaacacccaggagctcctggacctgctggtgaagtgcgagaacaagatccagact
cgtatcaagatcggcctgaactccaaaatgcctagccgcttccctcctgtcgtcttctac
acccccaaagagttgggtgggcttggcatgctgtccatgggccacgtgcttattcctcag
tcagacctgcggtggtccaagcagacagacgtgggtattacccatttcaggtctggaatg
agccacgaagaggaccagctgattcctaacttgtatcggtacattcagccatgggagagc
gagttcatcgactctcagcgggtttgggctgagtacgccctcaagaggcaggaggccatc
gcccagaacaggcgtctgaccctggaggatctggaggactcatgggacagaggcatccct
cgtatcaacacacttttccagaaggacagacacacactggcctatgacaaaggctggaga
gtcaggactgatttcaaacagtaccaggtactgaagcagaatccgttctggtggacccac
cagaggcacgatggcaaactgtggaacctgaacaactaccgcacagacatgatccaggct
ctgggcggagtggagggcatcctggaacacacactctttaagggcacttactttcccacc
tgggagggtctcttctgggaaaaggccagtggttttgaggagtccatgaaatggaagaag
ctgaccaatgcccagaggtctggtttgaaccaaatccccaaccgtcgcttcacactttgg
tggtcccccaccatcaacagagccaacgtgtacgtaggtttccaggtacaacttgatctg
acaggaatcttcatgcacggcaagatccccactctgaagatctccctcattcagatcttc
agggctcacttgtggcagaagattcatgagagcgtcgtcatggatctctgtcaggtgttt
gatcaggagctggatgctcttgagattgagacggtgcagaaggagaccatccatcccagg
aagtcatacaagatgaactcctcctgtgcagacatcctgctctttgcatcatacaagtgg
aacgtctctcggccatctctgcttgctgactcaaaggacgtgatggacagcaccaccaca
cagaagtactggatcgacatccagctgcgctggggtgactatgactctcatgacatcgag
cgctacgccagggccaagttcctggactacaccacggacaacatgagtatctacccctcc
cccactggagtgctcatcgctatcgacctggcttacaacctccacagtgcctatggtaac
tggttccctggaagcaagcctctgatccagcaggccatggccaagatcatgaaggccaac
ccggccctgtatgtgctcagagagcgcatccgcaagggtctgcagctctactcctccgag
cccactgagccctacctgtcctctcagaactacggagaactcttctccaaccagatcatc
tggtttgtggacgacaccaacgtgtaccgagtcaccatccacaagacatttgagggtaac
ttgaccacaaagcccatcaacggagctattttcatcttcaaccccaggactggtcagctc
ttcctcaagatcattcacacctcagtgtgggctggacagaagcgtctgggacagctggcc
aaatggaagacagctgaagaagtggctgctctgattcgttccctccccgtggaagagcag
cccaaacagatcattgtaaccaggaagggcatgctggaccctctggaggtccacttgctc
gacttccccaacatcgtgatcaaaggttctgagttgcagctgcccttccaggcctgtctg
aaggtggagaagtttggagatctgatcctgaaggcgaccgagcctcagatggtgctgttc
aacctctacgacgactggctcaagaccatctcgtcctacacagccttctcccgactcatc
ctgatcctcagagcgctgcacgtcaacaatgaccgcgccaaggtgatcctgaagcctgac
aagaccaccatcaccgagcctcatcacatctggcccacgctcaccgacgaagaatggatc
aaggtggaggtgcaactcaaagatctcattctggcagattacggcaaaaagaacaacgtg
aacgtggcctcactgacacagtctgagatccgtgacatcatcctgggtatggagatctct
gctccctcacagcagcgccagcagattgccgagattgagaagcaaaccaaagagcagtcg
cagctcacagccacgcagacccgcactgtcaacaagcacggtgacgagatcatcacatcc
accacctccaactatgagacccagaccttctcatcgaagaccgaatggagagtcagagcc
atatctgctgccaacctccacctccgaaccaaccacatctacgtgtcatctgacgacatc
aaggagacgggctacacctacatcctgcccaagaacgtcctcaagaagttcatctgcatc
tcagatttgcgtgcacagattgcaggctacctgtatggcacgagtccaccagataacccc
caggtgaaggagatccgttgtatcgtcatggtgccacagtgggggactcaccagactgtt
cacctgcccaaccagctgccgggtcatgaatacctgaaagaaatggagccactcggatgg
atccatacccagcccaatgagtcgccccagctgtccccacaggacgtcaccacgcatgcc
aaggtcatggctgacaacccctcatgggacggagagaaaaccatcatcatcacctgcagc
ttcacaccaggctcgtgcacgctcacagcctacaagctgacacccagtggttatgagtgg
ggtcggcagaacacagacaagggaaacaaccctaaaggctacctgccctcccactatgag
agagtgcagatgctgctctctgaccgcttcctgggcttcttcatggtgcctggccaggtc
tcctggaactacaacttcatgggtgttcgccatgaccccaacatgaagtacgacctgcag
ctggccaaccccatggagttctaccatgaagtccaccggccctcgcacttcctaaacttt
gcctcgctgcaggagggtgaggtctataacgcagaccgtgaggacatgtacgcctga
DBGET
integrated database retrieval system
