Gymnodraco acuticeps: 117552215
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Entry
117552215 CDS
T09661
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117552215 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gacu04131
]
117552215 (scarf1)
Membrane trafficking [BR:
gacu04131
]
Endocytosis
Phagocytosis
Scavenger receptors
117552215 (scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
117552215
NCBI-ProteinID:
XP_034081438
UniProt:
A0A6P8V123
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MKLLLGALSALLCCSLSSSQTLDPAGKNVCHNIRDPSTLVCCTGWRQEGTECTLPVCEGE
QACLKDEICVYPGVCRCPPGYFGAHCKTRCPGEFWAADCRKVCECFPHGRCHPVTGECTC
NPNRWGPLCQSPCKCVRHGHCHPVHGNCSCDEGWWTATCSKPCQCGSVGSAGPGCDQLTG
RCQCNRGHWGLKCPVACNCYLSQCNQRTGVCECEAGWWGPSCDRRCNCDLTHSTCDPNTG
QCLCQPGYQGVYCNQPCEAGKYGSGCKRSCGFCRDHRPCSDTDGACDACESGWNGTRCDR
PCPAGSYGDGCLEECPRCRNNEPCDPKTGNCWRCDPGCTGPRCEEACTNRTFGDACGFLC
SPCFHGDCHQVTGRCDCQPGFTGESCNSSCPALQFGFNCSSACDCGEGGGCDPVTGVCPN
SGSAAVIAGVLVPLLLLLLAVLCCCLCCGGAPAGGKDRATMAEGGWSVRMKYHVYSVLAN
IGAALPCISDWSSGLPRVTVSHHDPELTFNHSFIEPPSSGWVTEGSSFDSDEEEGEALYC
VPPREDFPSVAGGEFHEMSSKCNMFMDPSGFSCEDITSPFNIPRTSSIAKSKRPSVSFAE
GTRFSPKERRGSAQDPGALPGHLRNKPKSPWGVLMLSALQSQGSASKTAQEDGAEDHEGD
DDGDVQETEYEETNYDAGDQEVDWTASRTTLQVPGDSGRRRTMSNTAAHKGTQLLTPASD
AQGGVLNKVTTVYVTVGKAGRPVSKTETSSEGPVQAMLRRIGSLQRQREQEVGRPKPKGA
EAIVKPPRRKLGARASVWEEGAPPAGEVGICKPIRRKNASVNTPDTAGANDTSSESGTPK
RPLSSILKSVPELALADSGSDLRAEGSDPTSGKTEGPYLTVGAAGDAESLTEVIANEGAV
VSVNDEPCYENVIIKHT
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttctcctcggagctctgagtgctctgctctgctgctcactgtcctcctcacaa
acactggatcctgctgggaaaaacgtctgccacaatatcagggacccctccaccctggtc
tgttgcactgggtggcgtcaagagggaacagagtgcaccttacctgtgtgtgagggtgag
caggcctgtctgaaggatgagatctgtgtgtatcccggagtgtgtcgttgcccccctggc
tacttcggagctcactgtaaaacacgctgtcccggtgagttctgggctgcggactgtcgc
aaggtgtgtgagtgcttccctcacggccgctgtcaccccgtcaccggagagtgcacctgc
aaccccaaccgctggggcccgctctgccagtccccctgcaagtgcgtccggcacggccac
tgccaccccgtccacgggaactgctcctgtgacgagggctggtggacggccacctgctcc
aagccgtgccagtgcggcagcgtggggtctgcgggccccggctgcgaccagctgacaggc
cggtgtcagtgcaacaggggccactgggggctgaaatgtcccgtcgcttgcaactgctac
ctgtcccaatgtaatcagcgaacaggtgtgtgtgagtgtgaggcaggctggtgggggccc
agctgtgaccggaggtgtaactgtgacctcacacacagcacctgtgacccgaacactgga
cagtgcctgtgccagccggggtaccagggggtctactgcaaccagccctgtgaagctggg
aaatacggcagtggctgtaaaaggagttgtgggttctgcagagaccaccggccctgctcg
gacactgacggcgcctgtgacgcctgtgagtccggctggaacgggacacgatgcgaccgg
ccgtgcccggctggttcctatggtgatggctgcctggaggagtgtccacgctgcaggaac
aacgaaccctgtgacccaaaaactgggaactgttggaggtgtgatccgggatgcactggt
cccaggtgcgaggaggcctgcactaacaggacgtttggagacgcctgtggtttcctgtgt
agcccatgtttccatggtgactgtcatcaagtgacaggaagatgtgactgtcagcccggc
tttacaggagaaagctgtaacagtagctgccccgccctgcagttcggcttcaactgttcc
tccgcctgtgactgtggggaggggggcggctgcgacccagtcactggagtgtgtcccaac
agtggcagtgctgcagtgatagcaggtgtgctggttcctctcctcctgctgctcctcgct
gtgctctgctgctgtttgtgttgtggaggggctcctgccgggggcaaagacagggcgact
atggctgagggaggctggtcagtccggatgaagtatcacgtctacagcgtcctggccaac
atcggagcggccctgccctgtatctctgattggtcctctggcctgccccgtgtcacagtg
tctcaccatgacccagagctgacgttcaaccacagcttcattgagcctccgtcgtctggc
tgggtgacggaggggtcgtccttcgacagtgatgaggaggagggggaggcgctctactgt
gtccctcccagagaagacttcccttcggtggcgggcggcgagttccacgagatgagctcg
aagtgcaacatgttcatggacccctccggcttcagctgtgaggacatcacctcgcccttc
aacatccctcgcacctccagcatcgccaagtccaagcggccttctgtttcttttgcagag
gggacccgcttcagccccaaagagaggcgtggctcggctcaggaccccggtgctctccct
ggtcacctgcgaaacaaacccaagtcaccctggggtgttctgatgctgtctgctctccaa
agtcaaggaagtgcctctaaaactgcgcaggaagatggagctgaggaccatgagggtgac
gatgatggggatgtgcaggagacagaatatgaggaaactaactatgatgcaggggaccag
gaagtagactggaccgcttcccggaccaccctacaggtccctggtgactcaggacgaagg
aggactatgtccaacacagctgctcataaagggacccagctgctgacacctgcctctgat
gctcaggggggggtcttaaataaggtcaccacggtgtatgtgacggtgggtaaggcaggg
aggcccgtgtccaagacggagacgagctctgagggtcccgttcaggccatgctgcggcgc
atcggaagcctccagagacagagggagcaggaggtaggcaggcccaagcccaaaggagca
gaagctatcgtcaaaccccccaggaggaagctgggagcgcgggcgagcgtgtgggaggag
ggggcgccgcctgcgggggaggtaggaatatgtaagccaatcaggagaaagaatgcttct
gttaacacccctgatacagctggtgcgaacgacacatcctcagagagcggcactccaaaa
aggccgctgtcgtccattttgaagagcgtgccagagctggctttagctgactcagggtca
gatctgagggcggagggcagcgaccccacctcgggaaaaactgagggcccctacctgacc
gtgggagcagcaggagatgcagagagtctcactgaggtcatcgccaacgaaggagcggtg
gtcagtgtgaatgacgagccctgctatgaaaatgtcataattaaacacacatga
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