Gymnodraco acuticeps: 117552410
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Entry
117552410 CDS
T09661
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04514
Cell adhesion molecule (CAM) interaction
gacu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117552410 (nfasca)
04517 IgSF CAM signaling
117552410 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gacu04515
]
117552410 (nfasca)
Cell adhesion molecules [BR:
gacu04515
]
Immunoglobulin superfamily
L1 family
117552410 (nfasca)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
V-set
Ig_PDGFR_d4
C2-set_2
Ig_6
Fn3_PBP1
BiPBP_C
Ig_C17orf99
DUF3157
Motif
Other DBs
NCBI-GeneID:
117552410
NCBI-ProteinID:
XP_034081675
UniProt:
A0A6P8V7W2
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MMRQGGHVALALMSSLLLLWRYAAAIEVPQDPKILQELKQPPTIVKQSVKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF
SSNDLGVALSNKILLRVSKAPLWPKEVLEPVVVTEGTPLVLPCNPPPGLPPPFTFWMNSA
MSPILQDKRVSMGLNGDLYFSNVLAKDAHNDYSCNARFLFTHTIQQKNPFSLKVQTNHNL
FQMKDDISPSRAEPYDETSYNATDPYGGRKLAESTPTFLSPSGSESSKMVLRDEQLLLEC
IAAGLPTPAIKWFKKGGDLPGRAKFENYNKTLKIINVSEEDAGEYVCMANSHLGSIRHSI
FVQVKAAPYWLDKPTNLVLAPDENGRLVCRANGNPKTNIQWLINGQPIDSSPHNPSRQVQ
GDTLIFRSVQIGSSAVYQCNASNEHGYLLANAFVSVLDMPPRMLAPKNQLIKVIQNNRTF
LDCPFFGSPLPDLRWFKNGQGSGLDGGQVTVFMSRHTGDHTGQNGGTRGTYTCVASSMLG
KAENQVRLEVKEPTRIIRAPEHQSAIRGSTVHLDCKVTSDPSLPVTVSWTKDDKPLHLGW
RLKKNEQSLSIPNVNEGDEGTYSCSVRSEIDEDSASARLTVLEEASLHPSVSSALPPDRP
DPPMDLDLSDPAARSVRLTWIPGNDHRRPITEFLVQFEEDRWESGRWQDLSSYPGDLNSV
ILQLNPFVNYQFRVIAINSVGQSTPSRPSPRYKTSGAAPDAIPRGLRGWGSKKDNMEITW
EPLLDLERNGPNMHYSVWWRRKDAGEEWRNVTTAGPKHVVHITETYVPYEIKIQARNEFG
QGPESNVVTGYSGEDNPSDAPTDLRVSKADSTKVNLHWRPVNLSSVQGEFKEYRLYYWRE
SSLVPGLLVSKEKKTKGFYSVVAEPSGVLSDLVPFSKYKMFMVVANSGLEGPPSNTVEIT
TKEGVPDAPKFFRINRRGFDTIHLQWDKPLEPNGLLIGYQLKYQTVNASRMGRHQLETFL
PNVTEFSLRLPDRSTRYKFFLSALTQVGSGEVFAEESPHFTNEDNGTDSTGLVELTEASV
DSAFSPTPPPLAPLPPTTIAPTTISTSTTTTTTSTTTAATTTTTEATTTTARPELVPTRR
NDQNVLVAPGLEIWNLTVEPNSNYANVSWRHNFPAGSSEFVLEFTLDSNKSVNVVPVKQS
PITVADLIAGAMYHLRVYSHELNSVSSKSITFKTKAAYIDQVDIATQGWFIGLMCAIALI
ILILLIVCFIKRSRGGKYPGGGCVTGFAKCLVRDKKDMALDAVDHKDQDGSFDYHSDEDN
KPLQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEAT
SPVNAIYSLA
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggcagggcggccatgttgccctggctctcatgtcatcactgctgctgctgtgg
cgttacgcagcagccatcgaagttccacaagacccaaagatccttcaggagctgaagcag
ccccccaccatagtcaaacagtcagtgaaggactacattgtcgaccccagagataacatc
atcatcgagtgtgaggccaagggcaacccagtgccaacgttctcatggcgaaggaacggg
aagttcttcaacattgggaaagatcccagggtgacgatgcggaaacgctcggggacgctg
gagatcggtttccgtagcggcgggcgaccggaggactatgagggggagtaccagtgtttc
tccagcaacgacctgggagtggctctgtccaacaagatcctgctgcgcgtctccaaggct
cctctgtggcccaaagaggtgctggagcccgtggtggtgactgaaggcaccccgctggtt
ctaccctgcaaccccccaccaggcctgcctcctccgttcaccttctggatgaacagcgcg
atgtctccgatccttcaggataagagagtgtccatgggtctgaatggagacctgtacttc
tccaatgttttggccaaagacgctcacaatgactacagctgcaacgctcgcttccttttc
acacacaccatccagcagaagaaccccttctcgctcaaagttcagacaaatcacaatcta
ttccaaatgaaggatgacatatccccatctagagcagagccgtatgatgaaacatcttac
aatgccactgacccctatggtggccgtaaacttgcagagtccacgcccaccttcctctca
ccctcagggagtgagagctccaagatggtgctacgagacgagcaactgctgctggagtgt
atcgctgctggactgccgacccccgccatcaagtggtttaagaaggggggggacctgcca
gggcgggcgaagtttgagaactacaacaagaccctgaagatcatcaacgtgtcggaggag
gatgctggggagtatgtgtgcatggccaacagtcatttaggcagcatacgccactccatc
tttgtccaggtcaaagcggctccttattggctggacaaacctacgaacctggtgctggcc
ccggacgagaacgggcgcctggtgtgtcgcgcaaacggaaaccccaaaaccaacatccag
tggctgatcaacggacagcccatagacagctctccacacaaccccagcagacaggtgcag
ggggacaccctcatcttccgctcggtacagattggaagcagcgctgtgtaccagtgcaac
gcctccaacgagcatggctacctgctggccaacgccttcgtcagcgtgctcgacatgcct
ccgaggatgctggctcctaagaaccagctgatcaaagtcatccagaacaaccgcaccttc
ctggactgtcccttcttcggctcccctctgccggacctgcgctggtttaagaacggacag
ggcagcgggctggatggcgggcaagtaaccgtgtttatgtcacggcacactggagatcat
acgggccagaatggagggacgagggggacctacacctgtgtggccagcagcatgctggga
aaggccgagaaccaggtccgcctggaggtcaaagagcccacacgtataatcagagccccg
gagcaccagtccgccatccggggctccacggtccacctggactgtaaggtgacctctgac
cccagcctgcccgtcactgtgagctggaccaaggacgacaagcccctccacctgggatgg
aggctgaagaaaaacgagcagtccctgagcatccctaatgtgaacgaaggcgatgagggc
acatacagctgctctgtgagatctgagatagacgaggactcagcctcagcccgcctcact
gtgttagaggaagcctccctccacccctcagtctctagtgccttgcctccagaccgtccg
gaccctcccatggatctggacctgtcggaccccgcggcccgcagcgttcgcctcacttgg
atccccgggaacgaccacaggagaccgatcacagagttcctggtccagtttgaggaggac
cgatgggagtccggcaggtggcaggacctatcctcgtaccctggagacctgaactctgtc
atcctgcagctcaaccccttcgtcaactaccagttcagagtcatcgccatcaactccgtg
ggccagagcacccccagccggccctccccccgatacaagaccagcggagcggctccagat
gctattcccagaggactacgaggatggggatccaagaaggacaatatggagatcacctgg
gagcctctgctggacctggagagaaatggccccaacatgcactacagtgtgtggtggagg
aggaaggatgcaggggaggagtggaggaatgtgaccacagcggggcccaaacatgttgtc
cacatcacagaaacctacgtgccttacgagatcaaaatccaggccaggaacgagtttggg
caggggcccgagtccaatgtggtcactgggtactctggggaggacaatcccagcgacgct
cccactgacttgcgggtgtcgaaggccgacagcaccaaggtgaaccttcactggaggccc
gtgaacctgagctctgtgcagggggagttcaaggagtacaggttgtactactggcgtgag
tccagtctggttccaggtctgctggtcagtaaagagaagaagaccaaagggttctacagc
gtagttgcagagccatcgggagtcctcagcgacctggtgccattctctaaatacaagatg
ttcatggtggtggccaacagcggcttagagggtccgcccagcaacacggtggagatcacc
accaaggagggggtgccggatgctcccaagtttttcaggataaacaggagaggttttgac
accatccaccttcaatgggacaagcctctagagcccaacggcctcctgattggttaccag
ctcaagtaccagacagtcaacgcctccaggatgggccgccaccagctggagaccttcctt
cccaatgtgacagagttcagcctccgcctgccggaccgctccacccgctacaagttcttc
ctgtcagcgctcacacaggtggggtcgggggaagtgttcgctgaggagtccccacacttc
accaatgaagacaacggtactgactctacaggcctagtcgagcttacagaggcctccgta
gattcagctttctctcctactcctcctcctctcgctcctcttcctccaactaccatcgct
cctacaaccattagtacctcaactactactaccactacttctactactactgctgctact
accactacgactgaggcgaccactaccactgcacgtcctgagctggtccccaccaggcgc
aatgatcagaatgtgttggtggcccctgggctggagatctggaatctgacggtggagcct
aacagtaactacgctaacgtcagctggagacacaacttcccggccggcagcagcgagttt
gtgctagagttcacactggacagcaacaagtcggtgaacgttgtccccgtgaaacagtcc
cccattacggtggccgatctgatcgcaggcgccatgtaccatctgagggtttactcccat
gagctcaacagcgtcagcagcaaatctatcacctttaagaccaaagcagcctacatagac
caggtggacattgccactcaaggctggttcatcggcctgatgtgtgccatcgccctcatc
atcctcatcctgctcatcgtctgcttcatcaagaggagtcgcggaggcaaatacccaggt
ggtggttgcgtgactggttttgcaaaatgtctagtccgtgacaaaaaagatatggcgttg
gacgcagtggatcacaaagaccaggatggatcttttgattaccacagcgacgaggacaac
aagcctctgcagggcagccagacgtctctggacggcaacgtgaaggagagcgacgacagc
ctggtggactacggagagggcggcgacggccagttcaacgaggacggctctttcattggc
cagtacacggtgaagaaggacaaggacgaaacggagggcaacgagagctctgaggccacc
tcgcccgtcaacgccatctactcgctggcgtag
DBGET
integrated database retrieval system
