Gymnodraco acuticeps: 117552448
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Entry
117552448 CDS
T09661
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117552448 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gacu04121
]
117552448 (herc4)
Enzymes [BR:
gacu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117552448 (herc4)
Ubiquitin system [BR:
gacu04121
]
Ubiquitin ligases (E3)
HECT type E3
117552448 (herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RLD
HECT
RCC1
RCC1_2
Alsin_RLD
Motif
Other DBs
NCBI-GeneID:
117552448
NCBI-ProteinID:
XP_034081759
UniProt:
A0A6P8UVC5
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKKVCDVGCGLRHTAFLLEDGTVYTCGC
NDLGQLGHEKCRKKPEQVVALDAQIILAVSCGESHTLALNDKGQVFSWGQGSDGQLGLNN
FEECVRVPRNIKSLSDIQIAQVACGYWHSHALSRGGQVFSWGHNRYGQLGLGINGQSVST
PQIIQSLQGVPFTQISAGGAHSFALTLSGAVFGWGRNKFGQLGLNDCNDRSYPTLLKSLR
SQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNVVTQIS
CGRQHTMAFTPSCGKMDAFGLAGNGQLGTRSTCNRKNPAPVKGPWGCSNSSMDTDSESGY
CVKRIYAGGDQSFAHYCTASDKDDVRIPDPHRRICTLNQEIIHKWCNYSPGRLPIEISNE
IELVFSSASCLNGSFLSTSNPDHYSTSSKCSGVDLSMARLLLHRVVQQDHHEIAQQIAAS
LEKNLIPRLSNSPPDIEALRLYLTLPECPLFSDRNNYVTIAIPFAKSLLSLKETPLKVLG
NWWSTFEPPVFQRMVELYKGVVVYLLQMHKMGIPSVEQRIFTCFLDTSLRLLEILHTVSE
RAGHIIEYDKFYIHELDDLIDIRNDYVTWIQRQMYPLGQDGVVTLCRYPFVFDAQAKTTL
LQTDAVIQMQMAVDQAQMQNFSSMFMPAVESVNPCLILIVRRENIVGDTMEVLRKSKNVD
YKRPLKVIFVGEEAVDAGGVRKEFFLLIMKELLDPKYGMFRYHEESRLIWFSNKTFEDID
LFNLIGIVCGLAIYNLTIVELNFPVALYKKLLKKKPTLEDLKELMSDVGRSLQHLLDYTE
DDLEDTFCLNFTITEENYGATEVLELIPNGEDINVNKSNRQDFVNAYVDYVFNTSVAPLF
ECFHAGFHKVCGGKVLELFQPNELQAMVIGNTNYDWTELEKSTEYKGEYWADHPTIRLFW
EVFHSLPIEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGGGEQYLPVAHTCFNLLDLPK
YRSLENLRDKLLQAIDHNQGFNLA
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggggaaatgcttcctacggacagctaggcttgggtgggattgatgaagag
attgtggttgagccacgaaaatgtgaattcttccacgggaagaaagtgtgcgatgtgggg
tgtggcctcagacacacagccttcctgctggaggatgggacagtgtacacctgtggctgc
aatgacctggggcagctgggccatgagaagtgcaggaagaaaccagaacaggtagtggcc
ctggatgcacagatcatactggcggtgtcctgtggagagtcccatacactcgccttgaat
gacaaagggcaggtgttctcttggggccagggttcagatgggcagctgggcctaaataat
tttgaagaatgtgtccgtgtgcctagaaatatcaagagtttgtcagatatacaaatagct
caggtagcctgtgggtattggcactcccatgcactttcaagagggggccaagtcttctcc
tggggccacaatcgatatggacaacttgggctaggcataaacggacagagcgtctcaacg
ccccaaatcattcagtctctgcagggcgttccttttactcagatatcagcaggcggggct
cacagtttcgccctcactctctcaggagccgtgttcggttgggggcgcaacaagttcggt
cagctgggtctcaatgactgcaacgatcgctcttacccaaccctgctgaagtccctcaga
tcgcagagagtgatttatgtctcctgtggagaagatcacaccgcagcactgaccaaggaa
ggaggtgtgtttacatttggagcgggaggatacggacaactcggacacaactctacaaac
catgaaatcaacccgaggaaagtgtttgagctcatgggaaacgtagtcacgcagatttca
tgtggaaggcagcacacgatggccttcacgccctcctgtggaaagatggatgctttcggg
cttgctggtaacgggcagcttggtacccgctccacttgcaacagaaaaaacccggcccct
gtcaaaggcccctggggatgctccaattcttcaatggatacagactcggagtcgggctac
tgtgtcaagaggatttatgcaggaggagaccagagctttgctcactattgcacggccagt
gacaaagacgatgtgaggataccagacccccacaggaggatctgcaccttgaatcaggag
atcatacacaagtggtgcaactactccccaggacgactcccaatagaaatctccaatgag
attgaactcgtgttctcctcagcaagctgcctcaacggatcatttctctcaaccagtaat
ccagatcactacagcaccagcagtaaatgttctggggtggatctgagcatggctcgcctc
ctgttgcacagagtggtccaacaagatcaccatgagatcgctcagcagattgctgccagt
ctggagaagaacctaattcccagactaagcaactctcctccagacattgaagccctgaga
ctctacctcactctccctgaatgtcctctcttcagcgacagaaacaattacgtgaccatc
gctatcccatttgccaaatccctcctcagtctgaaagagactccgctgaaggtgctagga
aactggtggtctactttcgagccccctgtcttccagcggatggttgagttgtacaagggg
gtggtggtttatctgctccagatgcacaagatgggcattccctcggtggagcagagaatc
ttcacctgtttcctggacacgtccctccggctcctggagatcctgcacacggtgagcgag
agagcaggacacatcattgagtacgataagttctacatccatgagttggatgacctgata
gacatcagaaatgactacgtcacatggattcagaggcagatgtacccactgggtcaagat
ggcgtggtgactctgtgcaggtatcccttcgtatttgatgcccaagcaaagaccacgctg
ctccagactgacgctgtcatacagatgcagatggcagtggaccaggcacagatgcaaaac
ttcagctccatgttcatgccagcggtggaatcagtcaacccgtgcctcatcctcatcgtt
cggagggagaatattgttggagacaccatggaggtcctcaggaagtccaagaatgtcgac
tacaagagacccctcaaggtgatcttcgtgggagaagaggccgtcgatgctggaggcgtc
agaaaggagttcttcctcctgatcatgaaagagctgctggatccaaaatatgggatgttt
cgttaccatgaggagtccaggctcatctggttttcaaacaagacctttgaggacatcgac
ctgttcaacctcatcgggatcgtctgtggtctggccatctacaacctcactatagtggag
ctcaacttccccgtggccctttacaagaagctcctgaagaagaagccaacactggaggat
ctgaaggagctcatgtcagatgtgggaaggagtctgcagcacttactggactacacagaa
gatgaccttgaggacactttctgcttgaactttacaatcacagaggagaactatggtgct
acagaggtcctggaattaatacccaatggcgaagacatcaatgtcaataaatcaaacagg
caggactttgtcaatgcgtacgtagactatgtgttcaacacatcagtggctccgctgttt
gagtgcttccacgcgggcttccacaaggtgtgcggtggaaaagttctcgagctgttccag
ccgaatgaactgcaagccatggtgattgggaacaccaactatgactggacggagctcgaa
aagagtactgagtacaaaggggagtactgggcggaccaccccaccatcaggctcttctgg
gaggtgttccacagtctacctatagagaagaaaaagcagttccttttgttcctcacagga
agtgaccgcatacccattctgggcatgaagagtctgaagctggtgatccagcccacaggt
ggaggagagcagtacctacctgtggcacacacctgcttcaacctgctggacctacccaag
tacaggagtctggaaaacctccgtgataaacttctccaggctatagatcacaatcaaggc
tttaatctcgcctga
DBGET
integrated database retrieval system
