Gymnodraco acuticeps: 117552473
Help
Entry
117552473 CDS
T09661
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04510
Focal adhesion
gacu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117552473 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117552473 (lamb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117552473
NCBI-ProteinID:
XP_034081833
UniProt:
A0A6P8V2N5
LinkDB
All DBs
Position
Unknown
AA seq
1780 aa
AA seq
DB search
MSLIVLVITTLALWTSVRAQQFPEFPDVCTEGSCYPATGDLLIGRAHKLSVTSTCGLKEP
ERFCIVGHLEEEKKCFLCDSRKPFHENKNQGSHSINNLVTTFAHNRLKTWWQSENGVENV
TIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSMDFGKTWQVYRYFAYDCETSFPGVSSGP
MVKVDEILCDSHYSDIEPSTEGEVIFRVLDPVFKIDDPYSLRIQNMLKITNLRVNFVKLH
TLGDNLLDHREEVTEKYYYALYDMVVRGNCFCYGHASECAPIDGEPSSAEGMVHGRCVCN
HNTEGLNCEHCQDFYHDLPWRPAEGRNTHACKRCECNQQSSSCHFDMAVYMTTGNVSGGV
CDACQHNTVGRQCEQCGPFYFQHPNRDLRDPRVCEPCNCDPAGSLQGGQCDSHTDVAAGL
ISGQCRCKANVEGERCDHCKQGHHGLGEGPNGCLPCSCSALGTLPGGNPCDSETGRCSCK
RFVDGHNCDQCLPQHWGLSNDMDGCRACDCDQGGAVNNSCDPHSGQCVCREHMFGRRCDQ
VESGFYFIALDHYTYEAEDAKYGPGVTVVPRPYPLDRSPTWTGMGFVNVPEGAYLEFNIN
NVPESMDYDILIRYEPQLPEQWEQGKIQVQRPVFNPPNYDTHCSNSIQSGDEQTISLPPG
SRHVLLVRPVCFERGLNYTIRLTLPLYSSVADIQSPYTLIDSLVLIPRVREMDMFVGVDG
DGAWDTFQRYRCLEGSQSVVKSPLTDICNDYIFSVSALLHKGAMACQCDPQGSLSAVCEP
SGGQCRCRHNVVGRNCDHCAPATFQFSPAGCRPCDCDPRGSITAFCHEATGQCECVPGAT
GRQCSHCLPGFWGFPQCRPCHCNGHSEFCHPQTGECQGCRDFTSGHHCERCLEGYHGDPE
LGSGGHCRACMCPDGPRSGRQFSDSCYLLAHTNQLVCVCSPGYKGARCDECSPGYFGNPL
VPGGRCLPCQCNSNIDMHDPASCDAHTGACLKCRHHSEGYSCQHCKLGYYGNAASQSCRK
CMCFSVGTSPRSCSSPGECQCDQVSGHCACKPNVVGQNCDRCATDTWDIASGTGCKRCDC
DPEHSSESSCNEVTGQCSCKAGFGGNTCRECRELFWGDPEDECHACDCDPRGISSDQCHR
ATGQCTCVEGVSGPRCDQCARGYQGEFPACAPCHQCFAIWDKVVGELTNQTQRLEAQVTE
LKDSGVTAQYKDVIKKLNRSVWAVKEILETNPAGLKLGEIEDLMHQITGVMSYLNGELNT
TEDALILLHSDANATDTKLDALTEEANQMEQSIQELKQQVYNAKNANIQGAMDTITSAHM
KSIQAEFQANSSTSDPGNTLDQSAIMRNDTENILIASQKGFDRAYKRNSQKLDKMTDELD
KLDLSELSEKICGGAADVEGCSSSPCGGLGCVGGDGAPQCGEGCTGLRSTSHSALKSSED
LDEKLLEAMQEVDKLSRMVWEANNRAKDAKVNALEVLGKSNRSKERVEQSNEQLRTLIKE
IRDLLTNEKADVAVIEAVSNEVLALEMPASAGKLKELTEEIREKVASLSNVETILGQSAR
DIQVAEELLKQAQAASEEASQMKVTTDIVKAALDETERAQNIAMDAIQLAQNNTKGTLEL
LVSVESETAMSELKLSNTTGRLLQLEREVGLLRQNNLEVTRLVEGADRTTEQARLNAEEA
QQEFDVEVKDKMVEVEDLVEDKGETVLQAKRRADTLQREAKQLLDQSSMQLKRLEEVESS
YESNQRILEEKATELVELERRVRQVLEEISYKVTLYSTCN
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttatagtcctcgttataacaactttggccctgtggacctccgtcagggcgcag
cagttcccagagttcccggatgtttgcaccgagggcagctgctaccccgccacaggtgac
ctgctgattggccgcgcgcacaagctcagcgtcacctccacctgcggcctgaaggagccc
gagcgcttctgcatcgtcggacatctggaggaggagaagaaatgttttttgtgcgactcc
aggaagccttttcatgagaacaaaaaccaagggagccattccatcaacaacctggtcacc
accttcgcccacaaccgtctgaagacctggtggcagtctgagaacggtgtggagaatgtg
accatccagctggacttggaggctgagtttcacttcacacatcttatcatgaccttcaag
acttttcggccagctgccatggtgattgagcggtcgatggacttcgggaagacgtggcag
gtttatcgttacttcgcctacgactgtgaaacatctttccccggcgtgtcctcagggccg
atggtcaaagtggacgagatcctctgtgactcccattactctgacatcgaaccatccact
gagggagaggtgatatttcgggtgctggaccctgtcttcaaaatagacgacccctacagc
ctgagaatacagaacatgctgaagatcaccaacctccgggtgaacttcgtgaagctccac
acgctgggcgacaacctgctggaccaccgggaagaggtgacggagaagtattactacgcc
ctctacgacatggtcgtccgcggcaactgcttctgctacggtcacgcctctgaatgcgcc
cccatcgacggagaacccagctctgcagagggcatggtccatggccgctgtgtgtgtaat
cacaacacagagggactgaactgtgagcactgccaagacttttaccacgatttaccttgg
agacctgcggagggacgaaacacacacgcttgcaagaggtgtgagtgtaaccaacagtcc
tcatcctgccactttgacatggcggtgtacatgacgacgggcaacgtgagcgggggagtg
tgtgacgcctgtcagcacaacacggtgggccggcagtgcgagcagtgcggacctttctac
ttccagcaccccaaccgggacctgagggacccccgagtctgcgagccatgtaactgtgac
ccggcgggctctctgcagggcggacagtgtgactcgcacacagatgtggctgctgggctg
atctcgggtcagtgtcgctgcaaagcaaacgtcgagggcgagcgctgcgaccactgcaag
cagggacaccacggcctgggggaggggcccaacggctgcctgccttgttcctgtagcgca
ctgggcaccctgcccggaggaaacccctgcgactcagagacaggaaggtgctcctgcaaa
cgcttcgttgatggacacaactgcgatcagtgtctgccgcagcactggggtctgtccaat
gacatggacggctgcagagcatgtgactgtgaccagggcggggctgtcaataatagctgt
gaccctcactcggggcagtgtgtgtgcagggagcacatgttcggccggcgctgcgatcag
gtggagtcgggcttctacttcatcgctctggatcactacacctacgaggcggaggacgcc
aagtacggccctggtgtgacggtggtaccgaggccgtaccctctggaccgcagtcccacc
tggaccggtatgggctttgttaatgttccagaaggagcttacctggagttcaacatcaac
aacgtcccagagtccatggactatgacatccttattcgctatgagccgcagctgccagag
cagtgggagcagggcaaaatccaagtccagcgtcccgtcttcaaccctccgaactacgac
actcactgcagtaactccatccagagcggagacgagcagaccatctctctaccacctgga
tccaggcacgtgctgctggtgaggccggtgtgcttcgagagaggactgaactacaccatc
cgcctcacgctgcctctctactcgtcagtcgctgacatccagagcccgtacacactcatc
gactctctggtgctgattccccgggtccgagagatggatatgttcgttggggttgacggg
gatggagcgtgggatacgttccagcgctaccggtgtctggagggcagccagagcgtggtg
aagagcccgctgaccgacatctgcaacgactacatcttcagcgtctctgccctgctgcac
aaaggagccatggcatgccagtgtgaccctcagggttccctcagcgctgtgtgtgagccc
agtggtggccagtgtcgttgccgacacaacgttgttggcaggaactgcgaccactgcgcc
ccggcaacgtttcagttcagccccgccggctgcagaccttgtgattgtgaccctcggggt
tcgatcactgcattctgccacgaggccacgggccagtgcgagtgtgtccccggggccacg
gggcgccagtgctcccactgcctgccgggcttctggggcttccctcagtgcagaccctgc
cactgtaacggccacagcgagttctgccaccctcagaccggagagtgccagggctgcaga
gacttcaccagcggacaccactgtgagaggtgtctggagggttaccatggagacccagag
ctgggttcagggggtcactgtcgagcctgcatgtgtcccgatggtcctcgcagcggacgc
cagttttctgacagctgttaccttctggctcatactaaccaactggtgtgtgtgtgcagc
cctggctacaaaggtgccaggtgtgatgagtgttctccgggttatttcgggaaccctctg
gttcccggtggccgctgcctgccctgccagtgtaacagcaacatcgacatgcacgacccg
gcttcctgcgacgctcacaccggggcctgtctgaagtgccggcaccacagcgagggctac
agctgccagcactgtaaactgggttactacggcaacgctgcctcccagagctgcaggaag
tgcatgtgtttctctgtggggacctcaccccggtcctgctcctcccctggggagtgtcag
tgcgatcaggtcagcggtcactgcgcctgcaagcccaacgtggtcgggcagaactgcgac
cgctgcgccaccgatacctgggacatcgccagcgggacggggtgcaaacgctgcgactgc
gaccccgaacactcctccgaatcctcctgcaatgaggtcacaggacagtgctcgtgtaaa
gcaggttttggtggcaatacgtgtcgggagtgcagagagctcttctggggggatccagag
gacgaatgtcatgcttgtgactgcgaccctcgggggatctccagtgatcagtgccaccgt
gcgacaggtcagtgcacctgtgtggaaggggtctccggcccccgctgtgatcagtgcgct
cggggctaccagggggagtttcccgcctgcgcaccctgccaccagtgctttgccatctgg
gacaaggtggtgggcgaactgaccaatcagacgcagcgtctggaggcccaggtgacagag
ctgaaggacagcggcgtgacggcacagtacaaggacgtgatcaagaaactgaacagaagc
gtctgggctgtgaaagaaatcctggaaaccaatcctgcagggctgaagctgggggagatc
gaggatctgatgcaccagattaccggtgtcatgtcctacctgaacggagagctgaacaca
acggaggacgcgttgatcctgctccacagcgatgccaacgccaccgatacaaagctggac
gcactgactgaggaggccaaccagatggagcagagcatccaggagctgaagcagcaggtg
tacaacgccaagaacgccaacatccagggtgccatggacaccattacatctgcacacatg
aagtctatacaggcggagttccaggccaacagctccaccagcgatcccggcaacacgctg
gaccagtcggccataatgcgaaatgacactgagaacatcctcatcgcgtctcagaaaggg
tttgaccgcgcatacaaaagaaactcgcagaagctcgacaaaatgaccgacgagctagat
aaactcgacctttctgaactgagcgagaagatttgtggtggggcagctgatgttgaagga
tgctccagctccccctgtggtggtctgggttgtgttgggggggacggagcgcctcagtgc
ggcgaaggatgcacaggcctccgctcgacatcccactctgctctaaaatcctctgaagat
ttggacgagaagctcctggaggcgatgcaggaggtggacaagctctccaggatggtatgg
gaggccaacaaccgcgctaaggacgcaaaggtgaacgctctggaagtgctggggaaatca
aaccggagcaaagagcgagtggagcagagcaacgagcagctgcgcaccctcatcaaagag
atacgagacctgctcaccaatgagaaggcagatgtggcggtgatcgaggcggtgtccaac
gaggtgttggctctggagatgccggcgtcggcgggaaagctgaaggagctgacggaggag
attagggagaaggtggcctctctgagtaacgtggagaccatcctggggcagagcgctaga
gacatccaggttgcagaggagctgctcaaacaggcccaggctgccagtgaggaggcttct
caaatgaaggtgacaacggacatagtgaaggcggcgctggatgagactgagcgtgctcag
aacatcgccatggacgccatccagctcgcccagaacaacacgaagggaaccctggaactg
ctggtctccgtggagtcggagacggccatgtcggagctgaagctcagtaacaccacgggg
cgcctgctgcagctggagagggaggtgggcctcctgaggcagaacaacctggaggtgacc
cgcctggtagagggcgccgaccggaccaccgagcaggcccggctgaatgcagaggaggcc
cagcaggagttcgacgtggaggtgaaggataaaatggtggaggtggaggacctggtggag
gacaaaggggagacggtgctgcaggcgaagaggagagcagacacgttacagagggaggcc
aaacagctgctggatcagagcagcatgcagctgaagagactggaggaggtggagagttcc
tacgagtccaaccagcggatcctggaggagaaagctacagagctggtggagctggagaga
agggttcggcaggtcctggaggagatcagctacaaagtcactctgtacagcacctgcaat
taa
DBGET
integrated database retrieval system