Gymnodraco acuticeps: 117552480
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Entry
117552480 CDS
T09661
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117552480 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gacu03400
]
117552480 (apex1)
Enzymes [BR:
gacu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117552480 (apex1)
DNA repair and recombination proteins [BR:
gacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117552480 (apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
117552480
NCBI-ProteinID:
XP_034081850
UniProt:
A0A6P8V8C9
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MKRGKKTEDAAADEENDTGSASAKKTKKAKEPEAPILYEDPPDKMTCKDGREANMKLTSW
NVDGLRAWVKKNGLDWVREESPDVLCLQETKCAEKSLPAAITSMPEYPYKYWAASDEKEG
YSGVAMLCKTEPIKVTYGIGKEEHDKEGRVITAEFPTFYLVTAYVPNSGRGLVRLDYRKT
WDVDFRAYLSELDIQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTPDERKGFTQLLESG
FTDSFRELYPEQTNAYTFWTYMMNSRSKNVGWRLDYFVLSSSLLPGLCDCKIRNKALGSD
HCPISLHIAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggaaagaagacagaggatgcagctgccgatgaggaaaatgacacaggctct
gcttcagcaaagaaaacaaagaaggcgaaagagccagaggccccgatactgtacgaggat
cctccagacaaaatgacctgcaaagatggacgtgaagccaacatgaagctcacttcctgg
aacgtcgacggtctgagggcatgggtgaaaaagaatggcctggattgggtgcgtgaggag
tctccagatgttttgtgtctgcaggagacaaagtgtgcagaaaaatccctccctgctgcc
atcacctccatgccagagtatccttacaaatactgggcagcgtccgatgaaaaggagggt
tacagtggtgtggccatgctctgcaagactgaacccatcaaggtcacctatggcattggt
aaagaagagcatgacaaggagggccgtgtcatcactgccgagttccccaccttttacctg
gtgaccgcctatgtgccaaactccggcagaggtcttgtgcgcctagattaccgcaaaacc
tgggacgtggacttccgggcgtacctgagcgagctggacatacagaagcccctggtgctg
tgtggtgaccttaatgtcgcacaccaggagatcgacctgaagaaccccaaggggaataag
aaaaacgcaggcttcacccctgacgagcgcaaaggcttcacccaactgctagagtccggt
ttcaccgacagcttccgcgagctctacccggagcagaccaacgcctacaccttctggacc
tacatgatgaactcccgctccaagaacgtgggctggaggctcgattacttcgtgctgtcg
tccagcctgctgccgggcctgtgcgactgcaagatccgcaacaaggccttgggaagcgac
cactgccccatcagcctgcacatagctgtgtag
DBGET
integrated database retrieval system
