KEGG   Gymnodraco acuticeps: 117552564
Entry
117552564         CDS       T09661                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
gacu  Gymnodraco acuticeps
Pathway
gacu04510  Focal adhesion
gacu04512  ECM-receptor interaction
gacu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117552564
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117552564
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117552564
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gacu04147]
    117552564
   00536 Glycosaminoglycan binding proteins [BR:gacu00536]
    117552564
Exosome [BR:gacu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   117552564
Glycosaminoglycan binding proteins [BR:gacu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   117552564
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 117552564
NCBI-ProteinID: XP_034082030
UniProt: A0A6P8V8S5
LinkDB
Position
Unknown
AA seq 1571 aa
MGSSVTVVTLSPLRWILVLLIIVQQLNAGSIDGPCEGRDCSVCQCNPAKGARSKTGAPGR
RDSKGPGANGDHGDIKGHLERKAEGNRGSMLGPEGPKGDRGHPGAGGEPGCWELMAVTGQ
GVDQESMVFLVLVVSMGNRVYTDTKALKENLSMGLDIRGSMVEMDNVVWTEEKETLDLVD
TLAVVAIMDMRVTTEDLWQELKGEQGPPGQPGPDGEEESKQFPLEILPAKGYKGEQGPSG
PCGPKGIRGGIGDYSIQGMKGEQGIPGFPGLRGLSGMPARDGLPGPEGVHGEKGFPGLIG
RNGTKGNQGDPGHPGPPGLLQLLNGSDARGVKGDNGSPGLAGHPGDPGLMGMHGPPGPPG
LTIPEVPGLPGQRGILGPKGHKGEPGRYNNYDNPYPGPKGVKGLLGHKGVTGSPGPPDYY
CEPGYPGDPGDPGHNGPSGNKGLKGIKGCLGECNCRSGGVGREGRNGPTGFPGSPGIPGT
QGLKGDPGLKGHDSPRGPEGFPGIPGIKGHKGQKGHSFVSDVKGAKGDLGDPGHSGPPGA
SGGSGRDAPPGPAGDPGTPGAGFAVLPGPKGYPGAAGPKGFHGPIGPPGPGFPGPKGLHG
PKGYQGSHGPSGIPGRPGPPGENGLCCHDYEIGLPGPDGEPGSPGIPGEPGRVGPPGTLG
HPGPKGMTGDDTSTGGIGRIGLQGLDGDPGEPGSSVISLVGPPGTPGFRGHPGRKGEPGD
VFSARPCDTGPPGLPGLLGKKGLRGIPGIPGPPGEQGLPGSPGWKGGPGSSGDPGATGPR
GPPCTAFELNGPPGPPGPTGDTGQRGIPGFPGQKGLKGDIGPPGHGLRGPKGFPGLPGLS
VVGPRGPYGLSGEPGADGWPGQKGESGYPGRPVSIGLPGRPGPAGPRGKQGERGFTGHTG
DPGYPGEPGNKGSKGPRGPPGDSGSDGLPGSPGFRGSTGAPGRAGRTGSPGSPGIKGLPG
PPGLKGMRGDDGQSVPRGIPGDPGDPGPRGRSGQPGPPGINAEQGRIGGPGFPGPRGSSG
RPGIPGLPGDHGGLGPPGPPGPYGHPGTPGPPGLDGLDGLRGPKGIKGESVPQAIDFPGP
PGPDGLLGVKGVRGQQGSPGASFPGPKGQRGPSGFTGIPGSPGELGNPGIECFRPPPGPY
GDIGYKGPPGPPGPPGEPGLPGSSIHSKGDPGPTGLPGLPGRKGDGGPSGPPGSQGYPGV
TRPKGERGPASLEGPPGPKGQTGVPGPWGRKEQLAKLGQQVSGAKGAPGGSISIDQGGTP
PGLLGPRGFPGFVGYPGDAGPPGTPGRKGLKGPVGYVGLPGKPGPAGRDGPVGDPGDIGQ
QGFTGPQGIPGTPGDQGNPGHRGALRSGYLLVVHSQSVQVPRCPEGSSPLWVGYSLVYLE
GQEKAHTQDLGQAGSCLRVFSTMPFSYCNKAACDYSSRNDKSYWLSTTAPIPMMPLFGQE
ISSHISRCAVCETVAPAVAFHSQDHNVPSCPRGWRSLWTGYSFLHHTGAGDEGGGQSLSS
SGSCLKDFRTHPFIECQGARGSCHYFANLYSFWLTTVSPTEQFITQRPGTIKAADQQRRK
SSQCHVCLRAE
NT seq 4716 nt   +upstreamnt  +downstreamnt
atgggatcctcagttactgtagttactctgtctcccctcaggtggatccttgtcctcctc
attattgtgcagcagctcaatgcagggagcattgatggcccatgcgaaggcagagactgc
tctgtatgtcagtgtaatcctgctaaaggtgcccggtcaaaaacgggagctccagggagg
cgggacagcaagggccccggggccaatggggaccatggggacatcaaggggcatctggag
agaaaggcagaggggaacagagggagcatgttgggcccagaagggcccaaaggagaccgg
ggccaccctggagcaggcggtgagcctggttgctgggagctgatggctgtaacgggacaa
ggggtcgaccaggagtcgatggtattcctggttttggtggtctccatgggcaaccgggtt
tacacggacacaaaggcattaaaggagaacctgtctatggggctggacatccgggggagc
atggtagagatggacaacgtggtctggacggaagaaaaggagacattggacctagtggac
acactggccgtcgtggcgataatggatatgagggtgacaacggaggatctctggcaggag
ctgaagggggaacaaggcccacctggccaacctggcccggacggagaagaagaatccaaa
caatttcctctagaaattcttccagccaaaggttacaagggagagcaaggtccttctgga
ccatgtggaccaaagggcataagaggcggtataggagactacagcattcaaggaatgaaa
ggagagcaaggaatccccggttttcctggattgaggggtctttcaggaatgcctgctaga
gatggacttcccggacctgagggtgtccatggagagaaaggatttccaggactcattgga
aggaatggaacaaagggtaaccaaggagatccaggtcacccaggtcccccaggtctcctg
caattgctcaatggaagtgatgccagaggtgttaagggtgacaatgggagtcctggatta
gctggacacccaggtgaccctgggctcatgggcatgcatggacctcctggcccaccaggg
ttaacaataccagaagtgcctgggctgcctggtcaacgagggatcctcggtcccaagggg
cacaagggagagccaggaaggtataacaactatgataatccatatccgggaccaaaggga
gttaaaggactcctcgggcataaaggtgtcacaggctccccggggcctccagattactac
tgtgagcctggttacccaggggacccaggtgatccaggccataatggccccagtggaaac
aaaggactcaaaggaattaaaggttgtctaggggaatgtaactgtaggtctggaggagta
ggaagagaaggtcgcaacggtccaactggttttccaggttctccagggattcctggaact
caaggacttaagggagaccctgggctaaaaggacatgacagtccaagaggaccagaaggc
tttccaggtattcctggtattaaaggacataagggtcaaaaaggtcactcttttgtgtca
gacgttaaaggtgccaagggtgacctaggagaccctggccattctggtcctcctggagca
tcaggtggatcaggaagagatgccccccctggccctgcaggagaccctggaacaccgggt
gctggatttgcagtgttacctggtcccaaagggtaccctggtgctgctggacccaaaggg
tttcacggtcctattggcccccccggtcctggttttccaggccctaaggggctccatgga
cctaagggttatcagggaagtcatggcccctcaggaattcctggacgaccaggccctcca
ggtgaaaatgggttatgctgtcatgattatgagattggactaccgggtcctgatggtgaa
ccaggatcaccgggtattccaggtgagccaggaagagttggtcctccaggaactctggga
cacccaggcccgaaaggcatgacaggagatgacactagtactggtgggattggacggata
ggacttcaaggtttagatggggatccaggtgaacctggttccagcgtaattagcctggtt
ggccctccaggcactcctgggtttcgcggacatccaggcaggaagggtgagccaggcgat
gttttctctgccaggccatgtgatactggaccacctggcctccctgggcttctggggaag
aaaggactacggggcattcctggaatcccagggcctccaggggaacaaggcctgcctgga
tcacctggttggaaaggagggccaggatccagtggtgaccctggggccactggtccccga
ggcccaccttgcactgcatttgaactgaatggacctccaggccctccaggccctacagga
gacactggacagagggggataccaggcttccctggtcagaagggtttgaagggagatata
ggtccacctggtcatggactgaggggtccaaaaggtttccctggccttcctggattatca
gtggttggaccaagaggcccttatggcctctcaggagagcctggggctgacggctggcca
ggacagaaaggggaaagtgggtacccaggcaggcctgtgtccataggtttgccaggccgt
cctggacctgcagggcccaggggtaaacaaggagagagaggctttaccggtcacacaggg
gaccctggatacccaggagagcctggtaataaaggctcaaagggcccgaggggaccacct
ggggattcggggtcagatggattgcctggttctccagggtttagaggcagcaccggtgct
ccaggtagagcaggaagaacagggtctccagggtcccctggaatcaaagggttacctggt
ccacctggactcaaagggatgcgaggggatgatggacagagtgtgcccagagggattcca
ggagatccaggagacccaggaccccggggaaggtcaggacaaccaggaccacccggcatt
aatgcggagcagggaagaataggaggaccaggcttccccgggcctcgtggctcttccggt
cgtccaggtattccaggtctgccaggcgatcatggaggtctgggaccacctggcccacct
ggcccatatgggcatccagggacccctggaccaccaggtcttgatggactggatgggctt
agaggtccaaaagggataaaaggcgagagtgtgcctcaagccatagatttccctggccct
cctggaccagatggtcttcttggagtcaaaggtgtcaggggacagcaagggtctccagga
gccagttttcctgggcctaaaggccagagaggcccgtctggcttcacaggtattccaggc
tccccaggtgaacttgggaaccctggcatagagtgcttcaggcctccaccaggaccctac
ggggacataggatataaaggacccccaggaccccctggccctcctggggagccgggcctt
ccaggcagcagcattcactccaaaggagacccaggtccaaccggcctccctgggttacca
ggccgcaagggcgatggtggcccctcagggcctcctgggtcacagggctacccaggggtt
acaaggccaaaaggtgagagaggacctgctagtctcgaaggtcctccaggccccaagggt
cagaccggggtccctgggccttggggacggaaggagcaactggccaaactggggcaacag
gtaagtggtgccaaaggtgctcctggtggttccatcagtatcgaccaaggtgggactcca
cctggactcctgggaccgcgtggattcccaggatttgtgggatatcccggtgatgcaggt
cctcctgggacaccaggacgtaaaggactgaagggtcctgtagggtatgttggcctccct
ggcaaaccaggtcctgctggtcgtgatggtcctgttggagacccaggagacattggtcag
caaggatttactggacctcaaggtatcccaggtacacccggtgatcaaggtaatccaggc
catagaggggcgctgaggtcaggctaccttttggttgtccacagtcagtcagttcaggtg
ccacgatgccctgaaggcagcagcccgctttgggtcggctacagtctggtctacttggag
gggcaagagaaggctcacactcaagacctgggccaggctggctcctgtctccgtgttttc
tccaccatgcctttctcctactgcaacaaagctgcctgcgactactccagtcgcaacgac
aaatcctattggctctccaccaccgctcccatacccatgatgcccctcttcggccaggag
attagctcccatatcagtcgctgtgcggtgtgtgagactgttgcgcctgcagtggctttt
cacagccaggatcacaacgtcccctcatgcccacgtggctggaggagcctgtggacggga
tactctttcctccatcacacaggggccggtgatgagggtggtggccagtctctttcttcc
tctggcagctgccttaaggatttccgaactcaccccttcatagagtgccagggtgcgcgc
gggtcctgtcactactttgccaacctctacagtttttggctgactactgttagtccaaca
gaacagtttatcacccagaggcctggcaccatcaaggcggcggaccaacagcggcgcaag
tccagtcagtgtcacgtctgcctcagagcagagtaa

DBGET integrated database retrieval system