Gymnodraco acuticeps: 117552564
Help
Entry
117552564 CDS
T09661
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04510
Focal adhesion
gacu04512
ECM-receptor interaction
gacu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117552564
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117552564
09142 Cell motility
04820 Cytoskeleton in muscle cells
117552564
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gacu04147
]
117552564
00536 Glycosaminoglycan binding proteins [BR:
gacu00536
]
117552564
Exosome [BR:
gacu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117552564
Glycosaminoglycan binding proteins [BR:
gacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117552564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117552564
NCBI-ProteinID:
XP_034082030
UniProt:
A0A6P8V8S5
LinkDB
All DBs
Position
Unknown
AA seq
1571 aa
AA seq
DB search
MGSSVTVVTLSPLRWILVLLIIVQQLNAGSIDGPCEGRDCSVCQCNPAKGARSKTGAPGR
RDSKGPGANGDHGDIKGHLERKAEGNRGSMLGPEGPKGDRGHPGAGGEPGCWELMAVTGQ
GVDQESMVFLVLVVSMGNRVYTDTKALKENLSMGLDIRGSMVEMDNVVWTEEKETLDLVD
TLAVVAIMDMRVTTEDLWQELKGEQGPPGQPGPDGEEESKQFPLEILPAKGYKGEQGPSG
PCGPKGIRGGIGDYSIQGMKGEQGIPGFPGLRGLSGMPARDGLPGPEGVHGEKGFPGLIG
RNGTKGNQGDPGHPGPPGLLQLLNGSDARGVKGDNGSPGLAGHPGDPGLMGMHGPPGPPG
LTIPEVPGLPGQRGILGPKGHKGEPGRYNNYDNPYPGPKGVKGLLGHKGVTGSPGPPDYY
CEPGYPGDPGDPGHNGPSGNKGLKGIKGCLGECNCRSGGVGREGRNGPTGFPGSPGIPGT
QGLKGDPGLKGHDSPRGPEGFPGIPGIKGHKGQKGHSFVSDVKGAKGDLGDPGHSGPPGA
SGGSGRDAPPGPAGDPGTPGAGFAVLPGPKGYPGAAGPKGFHGPIGPPGPGFPGPKGLHG
PKGYQGSHGPSGIPGRPGPPGENGLCCHDYEIGLPGPDGEPGSPGIPGEPGRVGPPGTLG
HPGPKGMTGDDTSTGGIGRIGLQGLDGDPGEPGSSVISLVGPPGTPGFRGHPGRKGEPGD
VFSARPCDTGPPGLPGLLGKKGLRGIPGIPGPPGEQGLPGSPGWKGGPGSSGDPGATGPR
GPPCTAFELNGPPGPPGPTGDTGQRGIPGFPGQKGLKGDIGPPGHGLRGPKGFPGLPGLS
VVGPRGPYGLSGEPGADGWPGQKGESGYPGRPVSIGLPGRPGPAGPRGKQGERGFTGHTG
DPGYPGEPGNKGSKGPRGPPGDSGSDGLPGSPGFRGSTGAPGRAGRTGSPGSPGIKGLPG
PPGLKGMRGDDGQSVPRGIPGDPGDPGPRGRSGQPGPPGINAEQGRIGGPGFPGPRGSSG
RPGIPGLPGDHGGLGPPGPPGPYGHPGTPGPPGLDGLDGLRGPKGIKGESVPQAIDFPGP
PGPDGLLGVKGVRGQQGSPGASFPGPKGQRGPSGFTGIPGSPGELGNPGIECFRPPPGPY
GDIGYKGPPGPPGPPGEPGLPGSSIHSKGDPGPTGLPGLPGRKGDGGPSGPPGSQGYPGV
TRPKGERGPASLEGPPGPKGQTGVPGPWGRKEQLAKLGQQVSGAKGAPGGSISIDQGGTP
PGLLGPRGFPGFVGYPGDAGPPGTPGRKGLKGPVGYVGLPGKPGPAGRDGPVGDPGDIGQ
QGFTGPQGIPGTPGDQGNPGHRGALRSGYLLVVHSQSVQVPRCPEGSSPLWVGYSLVYLE
GQEKAHTQDLGQAGSCLRVFSTMPFSYCNKAACDYSSRNDKSYWLSTTAPIPMMPLFGQE
ISSHISRCAVCETVAPAVAFHSQDHNVPSCPRGWRSLWTGYSFLHHTGAGDEGGGQSLSS
SGSCLKDFRTHPFIECQGARGSCHYFANLYSFWLTTVSPTEQFITQRPGTIKAADQQRRK
SSQCHVCLRAE
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgggatcctcagttactgtagttactctgtctcccctcaggtggatccttgtcctcctc
attattgtgcagcagctcaatgcagggagcattgatggcccatgcgaaggcagagactgc
tctgtatgtcagtgtaatcctgctaaaggtgcccggtcaaaaacgggagctccagggagg
cgggacagcaagggccccggggccaatggggaccatggggacatcaaggggcatctggag
agaaaggcagaggggaacagagggagcatgttgggcccagaagggcccaaaggagaccgg
ggccaccctggagcaggcggtgagcctggttgctgggagctgatggctgtaacgggacaa
ggggtcgaccaggagtcgatggtattcctggttttggtggtctccatgggcaaccgggtt
tacacggacacaaaggcattaaaggagaacctgtctatggggctggacatccgggggagc
atggtagagatggacaacgtggtctggacggaagaaaaggagacattggacctagtggac
acactggccgtcgtggcgataatggatatgagggtgacaacggaggatctctggcaggag
ctgaagggggaacaaggcccacctggccaacctggcccggacggagaagaagaatccaaa
caatttcctctagaaattcttccagccaaaggttacaagggagagcaaggtccttctgga
ccatgtggaccaaagggcataagaggcggtataggagactacagcattcaaggaatgaaa
ggagagcaaggaatccccggttttcctggattgaggggtctttcaggaatgcctgctaga
gatggacttcccggacctgagggtgtccatggagagaaaggatttccaggactcattgga
aggaatggaacaaagggtaaccaaggagatccaggtcacccaggtcccccaggtctcctg
caattgctcaatggaagtgatgccagaggtgttaagggtgacaatgggagtcctggatta
gctggacacccaggtgaccctgggctcatgggcatgcatggacctcctggcccaccaggg
ttaacaataccagaagtgcctgggctgcctggtcaacgagggatcctcggtcccaagggg
cacaagggagagccaggaaggtataacaactatgataatccatatccgggaccaaaggga
gttaaaggactcctcgggcataaaggtgtcacaggctccccggggcctccagattactac
tgtgagcctggttacccaggggacccaggtgatccaggccataatggccccagtggaaac
aaaggactcaaaggaattaaaggttgtctaggggaatgtaactgtaggtctggaggagta
ggaagagaaggtcgcaacggtccaactggttttccaggttctccagggattcctggaact
caaggacttaagggagaccctgggctaaaaggacatgacagtccaagaggaccagaaggc
tttccaggtattcctggtattaaaggacataagggtcaaaaaggtcactcttttgtgtca
gacgttaaaggtgccaagggtgacctaggagaccctggccattctggtcctcctggagca
tcaggtggatcaggaagagatgccccccctggccctgcaggagaccctggaacaccgggt
gctggatttgcagtgttacctggtcccaaagggtaccctggtgctgctggacccaaaggg
tttcacggtcctattggcccccccggtcctggttttccaggccctaaggggctccatgga
cctaagggttatcagggaagtcatggcccctcaggaattcctggacgaccaggccctcca
ggtgaaaatgggttatgctgtcatgattatgagattggactaccgggtcctgatggtgaa
ccaggatcaccgggtattccaggtgagccaggaagagttggtcctccaggaactctggga
cacccaggcccgaaaggcatgacaggagatgacactagtactggtgggattggacggata
ggacttcaaggtttagatggggatccaggtgaacctggttccagcgtaattagcctggtt
ggccctccaggcactcctgggtttcgcggacatccaggcaggaagggtgagccaggcgat
gttttctctgccaggccatgtgatactggaccacctggcctccctgggcttctggggaag
aaaggactacggggcattcctggaatcccagggcctccaggggaacaaggcctgcctgga
tcacctggttggaaaggagggccaggatccagtggtgaccctggggccactggtccccga
ggcccaccttgcactgcatttgaactgaatggacctccaggccctccaggccctacagga
gacactggacagagggggataccaggcttccctggtcagaagggtttgaagggagatata
ggtccacctggtcatggactgaggggtccaaaaggtttccctggccttcctggattatca
gtggttggaccaagaggcccttatggcctctcaggagagcctggggctgacggctggcca
ggacagaaaggggaaagtgggtacccaggcaggcctgtgtccataggtttgccaggccgt
cctggacctgcagggcccaggggtaaacaaggagagagaggctttaccggtcacacaggg
gaccctggatacccaggagagcctggtaataaaggctcaaagggcccgaggggaccacct
ggggattcggggtcagatggattgcctggttctccagggtttagaggcagcaccggtgct
ccaggtagagcaggaagaacagggtctccagggtcccctggaatcaaagggttacctggt
ccacctggactcaaagggatgcgaggggatgatggacagagtgtgcccagagggattcca
ggagatccaggagacccaggaccccggggaaggtcaggacaaccaggaccacccggcatt
aatgcggagcagggaagaataggaggaccaggcttccccgggcctcgtggctcttccggt
cgtccaggtattccaggtctgccaggcgatcatggaggtctgggaccacctggcccacct
ggcccatatgggcatccagggacccctggaccaccaggtcttgatggactggatgggctt
agaggtccaaaagggataaaaggcgagagtgtgcctcaagccatagatttccctggccct
cctggaccagatggtcttcttggagtcaaaggtgtcaggggacagcaagggtctccagga
gccagttttcctgggcctaaaggccagagaggcccgtctggcttcacaggtattccaggc
tccccaggtgaacttgggaaccctggcatagagtgcttcaggcctccaccaggaccctac
ggggacataggatataaaggacccccaggaccccctggccctcctggggagccgggcctt
ccaggcagcagcattcactccaaaggagacccaggtccaaccggcctccctgggttacca
ggccgcaagggcgatggtggcccctcagggcctcctgggtcacagggctacccaggggtt
acaaggccaaaaggtgagagaggacctgctagtctcgaaggtcctccaggccccaagggt
cagaccggggtccctgggccttggggacggaaggagcaactggccaaactggggcaacag
gtaagtggtgccaaaggtgctcctggtggttccatcagtatcgaccaaggtgggactcca
cctggactcctgggaccgcgtggattcccaggatttgtgggatatcccggtgatgcaggt
cctcctgggacaccaggacgtaaaggactgaagggtcctgtagggtatgttggcctccct
ggcaaaccaggtcctgctggtcgtgatggtcctgttggagacccaggagacattggtcag
caaggatttactggacctcaaggtatcccaggtacacccggtgatcaaggtaatccaggc
catagaggggcgctgaggtcaggctaccttttggttgtccacagtcagtcagttcaggtg
ccacgatgccctgaaggcagcagcccgctttgggtcggctacagtctggtctacttggag
gggcaagagaaggctcacactcaagacctgggccaggctggctcctgtctccgtgttttc
tccaccatgcctttctcctactgcaacaaagctgcctgcgactactccagtcgcaacgac
aaatcctattggctctccaccaccgctcccatacccatgatgcccctcttcggccaggag
attagctcccatatcagtcgctgtgcggtgtgtgagactgttgcgcctgcagtggctttt
cacagccaggatcacaacgtcccctcatgcccacgtggctggaggagcctgtggacggga
tactctttcctccatcacacaggggccggtgatgagggtggtggccagtctctttcttcc
tctggcagctgccttaaggatttccgaactcaccccttcatagagtgccagggtgcgcgc
gggtcctgtcactactttgccaacctctacagtttttggctgactactgttagtccaaca
gaacagtttatcacccagaggcctggcaccatcaaggcggcggaccaacagcggcgcaag
tccagtcagtgtcacgtctgcctcagagcagagtaa
DBGET
integrated database retrieval system