Gymnodraco acuticeps: 117553145
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Entry
117553145 CDS
T09661
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03013
Nucleocytoplasmic transport
gacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117553145
03015 mRNA surveillance pathway
117553145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117553145
Enzymes [BR:
gacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117553145
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117553145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
SPP1_GP23-1
Motif
Other DBs
NCBI-GeneID:
117553145
NCBI-ProteinID:
XP_034086491
UniProt:
A0A6P8V8Z6
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MCLWGGGPPSDPAEQSLLNKLIRRSLVRNRNQVEVLQRDPSSPLFSVKTFEELRLKPELL
RGVYCLGFNRPSRIQENALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVKPENHWTQ
CLCIAPTYELALQIGQVMEQMGKFCPEVTLTYAVRGNRMERGVRLQQHVVIGTPGTLLDW
CSKYRIIDPKLISMFVLDEADVMIATQGHRDQSIRIHRLLPKECQMLLFSATFEDSVWGF
AEKVVPDPNIIRLRREEETLDTIKQFYILCSEEEEKFSALCDLYGGLTVAQAMIFCRTRK
TASWLAGRLTEEGHQVALLSGELTVEQRADVIQRFRTGKEKVLVTTNVCSRGIDVEQVTL
VVNFDLPVDMEGNADNETYLHRIGRTGRFGRRGFAVNMVDSDRSMELIRQIERHFNRSIS
RLDPGSLQEMERLIS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctctggggggggggtcctccttcagacccggcggagcagtctctgctcaacaag
ctgatccggaggtctctggtgaggaacaggaaccaggtggaggttctgcagagagacccc
agctcccccctgttctctgtgaagaccttcgaggagctgcgtctgaagccagagctgctg
cgaggtgtttactgtctcggcttcaaccgcccgtctcgcatccaggagaacgctctgccc
atgatgctggcccagcctcctcagaacctcatcgctcagtctcagtcaggaacaggaaag
actgcagcgttctctctcgccatgctgagccacgtgaagccagagaaccactggactcag
tgcctgtgcatcgcccccacctacgagctggctctgcagatcggtcaggtgatggagcag
atggggaagttctgtcctgaggtcacgctgacctacgctgtgagggggaaccgcatggag
aggggggtgcgcctgcagcagcacgtggtcatcgggacccccggcaccctgctggactgg
tgcagtaaatacagaatcatcgatcccaaactcatctccatgttcgtgttggacgaggcg
gacgtgatgatcgcaacgcagggccatcgagaccagagcatcaggatacacaggctgctc
ccgaaggagtgccagatgctgctgttctcggccaccttcgaggactcggtgtggggcttt
gcagagaaagtagtccctgatccaaacatcatccgcctgaggagagaggaggagacgctg
gacaccatcaagcagttctacatcctctgcagcgaggaggaagaaaagttctctgctctg
tgcgacctgtacggagggctgaccgtcgctcaggccatgatcttctgccgtacccgcaag
acggcctcctggctggcagggcgcctgacggaggagggccaccaggtggcgctgctgagc
ggagagttgacggtggagcagagagcggacgtcatccagcgcttcaggaccggcaaggag
aaggttctggtgacgactaacgtgtgctccagaggtatagacgtggagcaggtgaccctg
gtggtgaacttcgacctcccggtggacatggagggtaatgcagacaacgagacgtatctc
caccggatcggacgcaccgggcgtttcgggcgccgaggcttcgccgtcaacatggtggac
agcgatcgcagcatggagctcatccggcagatcgagaggcacttcaaccgcagcatcagc
cggctggacccggggagcctgcaggagatggagcggctcatcagctga
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