Gymnodraco acuticeps: 117553201
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Entry
117553201 CDS
T09661
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117553201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gacu03009
]
117553201
Ribosome biogenesis [BR:
gacu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117553201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
Beta-prop_EML_2
Beta-prop_WDR5
WD40_WDHD1_1st
WDR55
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
EIF3I
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_WDR75_1st
Ge1_WD40
PROPPIN
Tricorn_2nd
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
117553201
NCBI-ProteinID:
XP_034082914
UniProt:
A0A6P8UYA9
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MAEFKVHRVRFFDYMPTAIRAMAFNPRTERLAVARADGALEIFNFADNYFQEKVIPGQDG
RAAEALCWLGQRLFSAGLNGEITEYDLENLRPRYTVEAYGGPIWSISSNSQGTLLAVGCE
DGTVKIFEILEERIQFQRNLDRQKGRIISLCWHPSGTLIAAGMMDMIKIFDAESGRATHR
LLVERGVGASKSREVVVWSIAFLSDHTIISGDSAGKVQVWDGLTGTLVRTHLVTKWDVLA
LSSSQDESSVVAGTSEGTVVQFQFLSSNVGQQDKEWVRTRTFKNHSHDVRGLAHTDTAVV
SGGMDTQLVVRPLLDKVEKNTQESALRKIAFPHRSLVCCAKKAGLLLFQFPDHLELWRLG
ESNGHGSPGDSLPVKRKPEKLIQLKRKGEDHISCSAVSPCGGWLAYSTVSSFRLYRLQNN
TISVTKVSRLPKDLRSAQQLCFSSDSTKLFASSCRSSVLVVDLNQSDCKYLHTLRPKSGE
TQSCCYVIALLATHGVMMFVKM
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttcaaggtgcaccgtgttcgcttcttcgactacatgcccactgctatccga
gccatggcgtttaacccccgcacggagcggctggctgtggcccgggctgatggagctctg
gagatcttcaacttcgcggacaactacttccaagagaaggtcatcccagggcaggacggc
cgggctgcggaggctctgtgttggctgggccagcgcctgttcagtgccgggctgaatgga
gagatcacagagtatgacctggagaacctgagacccaggtacacagtggaggcctatgga
ggaccaatctggagcatcagtagcaacagccagggaaccctgctcgcggttggttgtgaa
gacgggacagtgaaaatatttgaaatactggaagagaggattcagtttcaaagaaacctc
gacaggcaaaagggtcgtattatctctctctgctggcatccctctggtacattgatagct
gctggcatgatggacatgataaaaatctttgatgctgagtcaggccgtgccacacacaga
ctgctggtggagagaggagtcggagcatcaaagagtagagaggtggtggtttggagcatc
gccttcctgtcagatcacactatcatcagcggtgactcggcaggaaaggtccaggtctgg
gatggactcacagggactctggtcagaacccacctagtcaccaagtgggacgttctggcc
ctgtcttcttcccaggacgagagcagcgtggtagccgggacgtcagagggaacggtggtc
cagtttcagttcctctcctctaatgttggccagcaggataaggaatgggtccgaacaagg
acctttaaaaaccactcccatgatgtgagggggctcgctcacaccgacacagctgtggtt
tctggaggtatggacacccaactggtagtgcgcccccttttggacaaggtggagaagaac
acccaggagtcagcactgcgcaaaattgctttcccacatagaagcctggtttgttgtgca
aagaaagcaggactgctgctcttccagttccccgatcatttggagctgtggagactaggg
gagagtaatggacatggaagtcctggtgacagtctgcctgtgaagaggaaaccagagaag
ctgatccagctgaagaggaagggcgaggatcatatcagctgcagcgctgtgtctccatgt
ggaggctggctggcgtactccactgtctccagcttccgtctctacagattacagaacaac
accatcagtgtcaccaaggtgtctagactccctaaggaccttcgctcggcgcagcagctc
tgcttctcctctgactccaccaaactctttgcttcctcctgccgttcttcagtcctagtc
gttgaccttaaccagtcagattgcaaatacctccacaccctcagacccaaatcaggtgag
actcagtcctgctgttatgttatagcattgttagcaacacatggcgtgatgatgtttgtg
aaaatgtaa
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