Gymnodraco acuticeps: 117554099
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Entry
117554099 CDS
T09661
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117554099 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gacu03310
]
117554099 (rorc)
Transcription factors [BR:
gacu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117554099 (rorc)
Nuclear receptors [BR:
gacu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117554099 (rorc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117554099
NCBI-ProteinID:
XP_034084236
UniProt:
A0A6P8V3M4
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All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MFSNACAGPGARATNREVSVWTTQCFDRRVMEYEELDVPPTDNPIKKEGAVSKKTHLTQI
EIIPCKICGDKSSGVHYGVITCEGCKGFFRRSQLPTVSYSCSRQNNCQIDRASRNRCQHC
RLQKCLAQGMSRDAVKFGRMSKRQRDSLKAEVERHRQQQQQQQLQEDAPSLLSFATKARP
DCSAQLLQPMASAYSFSGDSELLSYTADVHPYLMCSPNESQVSSMIYRGSAVSTTLRSQG
RGDNSGHPEIRGFDSRQPPHDLVAIHPYSPLEDPYSLYPHSLRNVDELCASIVRSHRETT
QYRVEELQALRWKVLSREEIQVYQSKSVDEMWQHCANRLTDAVQYVVEFAKHIPGFRMLS
QNDQIALLKTGSMEVVLVRMCRYFNTENNTVFFDGKFAGVEVFKSLACGDLISAVFDFAH
DMCALKLTEQQIALFSALVLINTERPCLEDRSRVQRVQRSVEFGLTHILHRENQESLMHK
LYQRMAVLRSLCSLHMEKLRWFSQRYPLTAHSLFPPLYKELFACEAELLPGTTH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaatgcctgcgccggcccgggcgctagagcaaccaacagagaggtgagtgtg
tggaccacccagtgttttgacaggagagttatggaatatgaggagctcgacgtgcccccc
actgacaaccccatcaaaaaagaaggagccgtgtccaagaagactcatttgacccagatt
gaaattattccatgtaagatctgtggggataaatcctctggagtccattatggagtcatc
acttgtgagggctgcaaggggttcttccggcgcagccagctgcccactgtctcctactcc
tgctccagacagaacaactgtcagatcgaccgggccagccgcaaccgctgccaacactgc
cgcctgcagaagtgcttagcacagggcatgagcagagatgctgtgaaattcgggcggatg
tccaaacgtcagcgggactctctgaaagctgaagtggagcgtcaccggcagcagcagcag
cagcagcagctccaggaagacgccccgtctctcttgtccttcgccaccaaggcccgtcca
gactgctcagcgcagctccttcagcccatggcctccgcctactccttcagcggggattcc
gagctgctgtcctacaccgctgatgtccacccttacctgatgtgctcccccaacgagtcc
caggtgtctagtatgatctaccgaggctccgctgtgtccaccaccttgagatcccagggg
aggggagacaacagcggacaccctgagataagaggatttgactccagacagccgcctcat
gatctggtggcgattcacccctacagccctctggaggatccttacagcctctatcctcac
tctctgagaaacgtcgatgagctgtgtgccagcatcgtgcgctcccacagagagaccact
cagtacagggtggaggagctgcaggctctcagatggaaagtgctcagcagagaggagatc
caagtctaccagagcaaatcggtggatgagatgtggcagcattgtgccaatcgactgact
gatgccgtgcagtacgtggtggagtttgcgaaacacatcccaggttttcgtatgctcagc
cagaacgaccagattgctctcctgaagaccggctccatggaggtggttctagtccggatg
tgtcgctacttcaacacagagaacaacaccgtctttttcgatgggaaatttgctggagtt
gaagtcttcaagtctctggcatgtggtgatttaatctcagcagtgtttgacttcgctcat
gatatgtgtgctctaaagctcactgagcagcagatcgctctcttcagtgctctggtgctg
atcaacacagagcgtccgtgtctggaggacagaagcagagttcagcgagtgcaaagaagc
gtggagtttggactcacacacattcttcaccgagagaaccaagaaagtctaatgcacaag
ctgtaccagaggatggcagtgctgcgttcactgtgcagtctgcacatggagaagctgcgc
tggttcagtcagcgttacccactcaccgctcactctctgttccctcctctctacaaggag
ctgttcgcttgtgaggccgagctgctgccgggaaccactcactga
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