Gymnodraco acuticeps: 117554812
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Entry
117554812 CDS
T09661
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117554812 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117554812 (dhx36)
03012 Translation factors [BR:
gacu03012
]
117554812 (dhx36)
Enzymes [BR:
gacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117554812 (dhx36)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117554812 (dhx36)
Translation factors [BR:
gacu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117554812 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NPHP3_N
NB-ARC
Motif
Other DBs
NCBI-GeneID:
117554812
NCBI-ProteinID:
XP_034085240
UniProt:
A0A6P8VGC4
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MSHAYGGGGGRRGGRGGRGGGRGYRDGSRDGSRERWDRGGGRGSGGQSSDFDQDPGGGGQ
RDRPPPHLKGRDIGMWYARYGAVRRKQADRRSRPVVQMDAAREQHITKLLNSVQNDQPGP
ARDCRDAGASTSAANSSGHCYFDGEASEEDTKKIEFKSEEEEEEVTHKSQRYFSPAVVKD
EAPDAWDKDDQQEKEEKESLKKKDKELEFLCQEVVRDSSLDERLQRDLQSKKSDPKYKEM
LKFREKLPSYKRKEELVQLINSSRVLVVSGETGCGKTTQVTQFILDDYINRGVGSMCRVV
CTQPRRISAISVAERVSAERAESVGNGNSCGYQIRLQSRLPRRQGSVLYCTTGIILQWLR
SDPMLSSISHLVLDEIHERNLQSDVLLVIVKELLNLRDDLKVILMSATLNAEKFSKFFDN
CPVIHIPGLTFPVEEFLLEDIVEMTSYRPKNSDRRPSWKKGFMQGRQSRPEKEEKEAEYK
ESWPCYARTLQDRYSDHTIEALEMFDNDDKIDLELILALIRHIVLKEEEGAILVFLPGWS
DISSLNDLLTAQQMFRSDRFVIIPLHSLMPTVNQTMVFKRPPPGVRKIVIATNIAETSIT
IDDVVYVIDGGKIKETHFDTNNNISTMTSEWVSLANAKQRKGRAGRVCPGKCYHLYNGLR
ASLLDAYQLPEIMRTPLEELCLQIKILKLGSIAQFLEKALDPPTEKAVNLAIKNLIDLNA
LDHSENLTALGFHLARLPVEPHIGKLLLFGALLGCLDPVFTIAASLSFKDPFFIPLGKEK
MADMRRRVLSRNSKSDHLTIVNAFQGWEEAKQRGSRCEREYCWDNFLSANTLQMLHNMKG
QFADHLMNTGFVSSRDPKDPKSNVNSDNEKLIKAVIVAGLYPKVAMIKPSHSKKRPGVKV
YTQADGKVCIHPKSVNAEETEFNYKWLVYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITI
QKDEDQETIAVDQWIVFNSPARIAHLVKSLKKELDSLLEEKIRNPAPVDWQNRQSTDCAV
ITAIIDLITTQDKPTVSTKGRLWRPAPRGQHTHFKDGNDD
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgcatatggtggcggaggtgggagaagaggtggaagaggaggtcgaggagga
ggtcgagggtacagagatggaagcagagatggaagcagagagagatgggacaggggaggc
ggacggggctcagggggacaaagctcggacttcgaccaggacccaggaggagggggacaa
cgggaccggcctcccccacacctgaagggacgggatatcggtatgtggtacgcaagatac
ggagccgtgaggaggaagcaggctgaccggagatcgcggccggtggtccagatggatgca
gccagagagcagcacattacgaagctgcttaactctgtccaaaatgatcagcctggtcca
gcgagagattgcagggatgcaggagcctctacatcagctgccaatagtagtggtcattgt
tactttgatggcgaagcgtctgaagaggatacaaagaagattgagttcaagtctgaagag
gaggaggaagaagttactcataaatcacaacgttacttctctccagctgttgttaaagat
gaggctccagatgcgtgggataaagacgaccagcaggagaaagaggagaaagaaagtctg
aaaaagaaagacaaggaactggagttcttgtgtcaagaagtagtgagggacagttcactg
gatgaacgcttacagagagatctgcagagcaagaaatctgatccaaagtacaaagaaatg
ctgaaattcagggaaaaactaccgtcctataaaagaaaagaggagcttgtgcaactgatc
aactctagccgggtcctggtggtgagcggggagacgggctgtggaaagaccacccaggtc
acccagttcatcctggatgactacatcaacagaggagtgggctcgatgtgtcgggtggtc
tgcacgcagcctcggcgaatcagtgccatctcggtagcagagcgtgtatcagcggagagg
gcagaaagtgtaggaaatggaaattcatgtggttaccaaatccgcctgcaaagccggtta
ccacggagacagggttcggtcttgtactgtacaacaggcataattcttcagtggcttcgc
tcagacccaatgttgtctagtatcagccacctggttttggacgaaatccacgagaggaac
ctgcaatctgacgttttgctcgtcatcgtcaaggaactacttaaccttcgagatgacctc
aaggtcatcctcatgagtgccacgctcaatgcagagaagttttcaaagttttttgacaac
tgtccagttatccacatccctggtttgacgttcccagtggaagagttcttgctagaggac
atcgtggagatgacgagttatcgccctaagaattcagaccgccggccctcatggaagaaa
ggctttatgcagggccgccagtccagacctgagaaggaggagaaggaggctgagtacaag
gagagctggccttgttatgcgcgcactctgcaggacagatactccgaccacaccattgag
gccctagagatgtttgacaatgatgacaagattgaccttgagctgatcttggcactgatt
cgccacattgtgctcaaagaggaggaaggagcaatcttggtcttcctgcctggctggagc
gacatcagcagtctcaatgacctgctcacggctcagcagatgttccgatcagatcggttc
gttatcatccctctgcattccctcatgcctaccgttaatcagacgatggtgttcaaaagg
cctcctcctggagttagaaagattgtgatcgctaccaatatagccgagaccagcattacc
atagatgacgttgtttatgtgattgacggaggcaagattaaagagacacactttgacacc
aacaacaacatcagcactatgacttcagagtgggtcagcctggccaacgctaaacagagg
aaaggacgtgctggcagagtgtgtccggggaagtgctatcacctgtacaatggtctcaga
gccagcctgctggatgcctatcagttacctgaaatcatgaggacaccgctggaggagctc
tgcctgcagatcaagatattgaagctcgggtctatagcccaattcctagagaaagccctg
gaccccccgactgaaaaggctgttaacctagccatcaagaacctcattgacctgaatgcc
ctggaccattcagagaatctgacagcgctgggtttccacctggctcgtctgcctgtggag
cctcacatcggcaaactcctcctgttcggagccctgttgggctgcctggaccccgtgttc
accatcgctgcttcactcagcttcaaagaccctttcttcatccccctggggaaagagaag
atggcagatatgaggaggagggtcctgtccagaaactccaagagtgaccatctcactatt
gtcaacgcctttcagggctgggaggaagcgaaacagcgtggttccaggtgtgagagggag
tactgctgggacaacttcctgtccgccaacacactccagatgctgcacaacatgaagggt
cagtttgctgaccatctcatgaacacaggcttcgtcagcagcagggaccccaaagatccc
aaatctaatgtcaactcagacaatgagaagttaatcaaggcagtgattgtagccggcctc
tacccgaaggtggccatgatcaaaccatctcacagcaaaaagaggccgggggtcaaagtg
tacacccaggctgatggaaaggtgtgcatccacccaaaatcagtcaatgctgaagagacg
gagttcaactacaagtggctcgtctaccacctgaagatgagaacgagcagtatcttcctg
tacgattgcactgaggtgtccccgttctcactgctgttctttggaggagacatcacaatc
cagaaggacgaggaccaggagaccatcgccgtggaccagtggatcgtcttcaactccccg
gcacgcatcgctcacctggtcaagagtttaaagaaagagttggattctcttctggaagag
aaaattcgtaaccctgctcctgtagactggcaaaaccgtcagtccacagactgtgctgtc
atcaccgccatcatagacctcatcaccacccaggataagcctacagtcagcaccaaaggc
agattatggaggcctgctccgagaggacaacacactcacttcaaagacggcaatgatgat
tag
DBGET
integrated database retrieval system
