Gymnodraco acuticeps: 117554899
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Entry
117554899 CDS
T09661
Symbol
rxraa
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03320
PPAR signaling pathway
gacu04148
Efferocytosis
gacu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117554899 (rxraa)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117554899 (rxraa)
03320 PPAR signaling pathway
117554899 (rxraa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117554899 (rxraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gacu03310
]
117554899 (rxraa)
Transcription factors [BR:
gacu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
117554899 (rxraa)
Nuclear receptors [BR:
gacu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
117554899 (rxraa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
117554899
NCBI-ProteinID:
XP_034085380
UniProt:
A0A6P8VGL1
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All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
METKPFLSLGFLKPQCSLAPPMQRGRSGEACSCFTGMCHLHQRRISSDSSGHMTSSPLGS
PTSHRGMHPSLLSPSMGHSGSLHSPISSLGSPMNGLTSPFSVISSPMGPHSMNSPGMGYG
PSLSPQMFQLNSPMNSVSSSEDIKPPLGLNGVMKVPAQPSGTILSLTKHICAICGDRSSG
KHYGVYSCEGCKGFFKRTVRKDLSYTCRDSKHCVIDKRQRNRCQYCRYQKCLAMGMKREV
LLHAAVQEERQRAKERNENEVESTGCANEDMPVEKILEAEQAVEPKTETYIETNLGAPSN
SPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIT
IKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPD
SKGLSNPGEVEALREKVYASLEAYCKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFF
KLIGDTPIDTFLMEMLEAPHQMT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccgttcctgtcattggggttcctgaagccccagtgctcgttggctcct
cccatgcagcggggtcgctcgggcgaggcatgttcctgtttcaccggcatgtgccacctc
catcagcgtcgcatatcctcagattcgtcaggccatatgacctcgtcacccctgggctca
cccacatcccacagaggaatgcacccgtctctattaagcccgtccatggggcactcgggc
tccctgcactctcccatcagctcgctgggttcgcccatgaacggcttgacatcacccttc
tccgtcatcagctcaccgatgggcccccactccatgaactcgcctggtatgggatacggc
cccagccttagcccccagatgttccagctaaactctccgatgaactcggtcagcagctcg
gaggacatcaagcccccgctgggcctcaacggcgtgatgaaggttcccgcccagccctca
ggcaccatcctgtcgctcaccaaacacatctgcgccatctgtggggaccgctcctcaggt
aaacactacggcgtgtacagctgtgaaggctgcaaaggttttttcaaaaggacggtgcgc
aaagacctgtcctacacctgtcgcgacagcaaacactgtgtcattgataaacgccagagg
aaccgctgtcagtactgccgctaccagaagtgtctagccatgggcatgaagagagaagtt
ttgttacatgcagccgttcaggaggagcgccagcgagccaaggagagaaatgagaacgag
gtggagtccaccggctgcgccaacgaggacatgcccgtggagaagatcctggaggctgag
caggcggtggaacctaaaaccgagacctacatcgagaccaaccttggtgcgccatccaac
tcgcccaacgacccggtaacaaatatctgtcaggcggcagacaagcagctctttactttg
gtggagtgggccaagaggatcccacacttctctgagctgccactcgatgaccaggtcatc
ctcctacgtgcaggttggaatgaactcctcattgcgtcattctcgcaccgctcgataacg
atcaaagacgggatcctgttggctaccgggctgcacgtccatcgcaacagcgcccatagt
gccggagtgggcgccatctttgacagagtgctcacagaactggtgtcaaaaatgagggac
atgcagatggataagacagaactggggtgccttcgagcgatagtccttttcaacccagac
tctaaaggcttgtccaatcctggtgaggtagaagctctgagagagaaagtgtacgcgtct
ttagaggcctactgcaaacagaagtaccccgaccagcctggccgatttgccaaactgttg
ctgcggttaccggcgctgcgctccatcggcctcaagtgtctggagcacttgttcttcttc
aagctcatcggcgacacgcccatcgacacgttcctcatggagatgctagaagcaccgcat
caaatgacataa
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