Gymnodraco acuticeps: 117554984
Help
Entry
117554984 CDS
T09661
Symbol
pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117554984 (pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117554984 (pan3)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117554984 (pan3)
mRNA degradation factors
3'-5' decay
Pan complex
117554984 (pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH_2
Pkinase
Motif
Other DBs
NCBI-GeneID:
117554984
NCBI-ProteinID:
XP_034085513
UniProt:
A0A6P8VHQ2
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MNSGLPASAAPLGVAGIPNVKVKFCRYYAKDKTCFYGEECQFLHDEPSMGSLPMHGGGSP
VPLSMAGGTGFPLGGPAAACPGGTGVSKKSETMGPAGTSLEGQLLTIPGMEGASLNDANL
TNSYFSSSFIGVNGFGSPAETKYSMMQRMTTSSSSPSLLNDGAKNFSHSTHDPVNSPTSS
LFSDFGALSISQRRKAPNPAASEFIPKGAPRMPPMAQAPMAQAPMAQAPMAQAPMAQSSV
PAFPSPLFPHPGLNSSTAAALAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPANYM
VPTSAADQGPHMIQKETVGGTTYFYTDNTPAPMSGMVFPTYHIYPPTAPNVAYMQPKANA
PSFFMADELRQELINRHLITMAQIDHSENPDVPSEVDSYHSLFPLEALPPPNRMQKTSNF
SYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMMLVDMWKKIQHSNSVTLREVFTTKAF
GDHSLVFSYDFHAGAETMFSRHFNDPAADSFFTKRKWGQHEPPPPRQHAGLLPESLIWAY
IVQLSSALRTIHTAGLACRVMDPSKILITGKTRLRVNCVGVFDVLTFDSSQTNHLALMPQ
YQQADLVSLGKVVLALSCNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTEQSRPRS
VNDIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPT
WSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVACLNKLDAGVPEKMSLVSRDEKSVL
VVTYSDLKRCFDSTFQELQAAASGSL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggactcccagcttcagctgctccgctaggggttgccgggatacccaatgtc
aaggtgaagttttgccgatattacgcaaaagacaaaacctgcttttatggagaagagtgt
cagttcctgcacgatgagccgtccatgggaagcctgcctatgcacggcggcgggagcccc
gtcccgctgtccatggccggcgggacggggtttcccctcggcggacccgcagctgcctgc
cctggggggaccggtgtgtccaagaaaagcgaaacaatggggcctgcaggcacgtctctg
gaggggcagcttttaaccatcccagggatggagggtgcgtctctgaacgatgccaatctc
accaactcttacttcagcagcagctttatcggggtcaatgggtttgggagcccagcagag
actaaatactcaatgatgcagcgaatgaccaccagcagcagctctcctagtctcctcaac
gatggtgccaagaacttcagccacagcactcatgatccggtgaactccccgacatcctca
ctgttcagtgattttggtgctcttagcatttcccaaaggagaaaggctcctaacccagca
gcaagtgagttcatccctaaaggagctccacgaatgccccccatggctcaggcccccatg
gctcaggcccccatggctcaagcccccatggctcaggcccccatggcccagtcctctgtc
ccggccttcccctctcctctgttcccacatcctggcctcaacagctccacagctgctgca
ctggctccaggcatgtctctgtctgcggggtcgtctcctcttcactccccaaaaattaca
ccgcacacctcacctgctcctcgccggcgcagtcacaccccaaaccctgccaactacatg
gtgcccaccagtgcagctgaccagggccctcacatgatccagaaagagactgtagggggg
acgacctacttctacacagacaacacccccgcgccaatgtctgggatggtgtttcctacc
tatcatatctatccccccactgcgcccaatgtggcttacatgcagccgaaagctaacgcc
ccgtctttcttcatggctgatgaactccgacaggagttgataaacagacatctaataacc
atggcccagattgaccactcggagaacccagatgtgccctctgaggtggacagctaccac
agcctcttccccctcgaggccctccctccacccaaccgcatgcagaagaccagcaacttc
agctacatcacctcctgctacaaggccgtcaacagcaaggatgacctgccttactgcctg
aggaggatacacggtttccgccttgttaacaccaagtgtatgatgctggtggacatgtgg
aagaagattcagcactcgaactctgttacactgcgggaggtcttcaccacaaaggccttc
ggagaccactctttagtgttctcctatgacttccatgcgggtgcagagaccatgttcagc
agacacttcaatgacccagcagcagactcgttcttcaccaagaggaagtggggacaacat
gagcctcctccgcctcggcagcacgcaggtctgctcccagagtctctgatctgggcctac
atcgtgcagctgagctcggccctgcgcaccatccacaccgccggcctggcctgccgcgtc
atggaccccagcaagattctcattactggcaagaccaggttacgggtgaactgtgtcggg
gtgtttgatgtcttaacttttgacagcagtcagaccaatcatcttgccctaatgccacag
taccagcaagcagacctagtgtcactgggcaaggtggtgctggcgctgtcatgcaactcc
ctggccggcattcaaagggagaacctgcagaaggccatggagctggtgtccatcaactac
tcttcagacctcaagaacctgatcctgtatctgctgactgaacagtctcgcccgcgcagc
gtcaatgacataatgccaatgattggagctcggttctacacacaactggatgcgtcgcag
atgaggaatgatgtcattgaggaggatctggctaaggaggtgcagaacggccgtctcttc
cgcctgttggccaaactgggaaccatcaacgagcgtccagagttccagaaggacccaacg
tggtcggagacaggtgatcgctacctgttgaagcttttccgggaccacctgttccaccag
gtgaccgaagcggggacgccctggatcgacctcagccacatcgtcgcctgcctcaacaag
ctggacgcgggtgttcctgagaagatgagcctggtgtcccgggacgagaagagcgtgctg
gtggtgacgtactcggacctgaagcgctgcttcgacagcaccttccaggagctgcaggcg
gcggcctccggctccctgtag
DBGET
integrated database retrieval system
