KEGG   Gymnodraco acuticeps: 117555262
Entry
117555262         CDS       T09661                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
gacu  Gymnodraco acuticeps
Pathway
gacu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117555262 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gacu03021]
    117555262 (taf5l)
   03036 Chromosome and associated proteins [BR:gacu03036]
    117555262 (taf5l)
Transcription machinery [BR:gacu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     117555262 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     117555262 (taf5l)
Chromosome and associated proteins [BR:gacu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     117555262 (taf5l)
    STAGA complex
     117555262 (taf5l)
    TFTC complex
     117555262 (taf5l)
    SAGA complex
     117555262 (taf5l)
    SLIK complex
     117555262 (taf5l)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd TFIID_NTD2 Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st NBCH_WD40 DSE1_N Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_RIG_2nd PAC11 ANAPC4_WD40 CFAP251_N Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_VPS8 RMC1_N Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Vps41 Tricorn_2nd ASA1 Beta-prop_WDR19_1st WD40_like PEP5_VPS11_N PROPPIN BCAS3_WD40 Beta-prop_IP5PC_F Nbas_N PD40 WD_LRWD1
Other DBs
NCBI-GeneID: 117555262
NCBI-ProteinID: XP_034086000
UniProt: A0A6P8VHX3
LinkDB
Position
Unknown
AA seq 615 aa
MKRVRTEQIQCAVTQYLKRRQYVETDGSLKGAKLFQSAEEMAASLSVQTESGCANIVSAA
PCQSEPQQYEAQFSRLRSFLSGIKSKNPPNHTSGKYETEISWAKEVSGLLYPLFVYLHLD
LVHCGLKGAVDGFYSRFHTLFLQDSEQRATIEQLRHVLTSQDVAANPKLSAFLEHKYVVH
LTEPAYSYLLRYLQSEDNSAICRALNTHLQVEVTASVRTDYQLYGAASGATAAPNPSSSW
AGVDGVEGGDGVEVPAGIPQSEVALEALQDCIKKVCEGPPTLTTVCFYAFHNTEQMLNTA
EVSADNRLLSAGFDSSTVKLWSLRARKLKAKPHQVDVSHIHLACDVLEEEEEEEDGSGSE
VKTLRGHSGPVFRTAFLTDSSGLLSCSEDTTVRYWDLGSFTNTALYRGHAYPVWDVDLSP
CSLYFASGSQDRTARLWTFSRTYPLRIYAGHLADVDCVKFHPNSSYLATGSTDKTVRLWS
TQQGASVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRVKLWDLASGSLFKDLRGHTDSVT
SLSFSPDSSLVASSSIDNSVRVWDIRNSHGVAPADGSSNEMVGLYTGNTSNVLNVQFMAC
NLLLVSGTAQEKTEQ
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgaagcgggttcgcactgagcagatccagtgtgccgtgactcagtacctgaagcggcgg
cagtatgtggaaactgacgggtctctgaaaggagccaagctcttccagtcagcggaggag
atggctgccagcctctcagtgcagacggagtcgggttgtgccaacatcgtctctgcggcg
ccgtgccagtccgagccgcagcagtacgaggctcagttctccaggctgcgctccttcctc
tcaggtatcaaatccaaaaatccaccaaatcacacgtctggaaaatatgaaacagaaata
tcctgggcgaaggaggtgagcggcctcctctacccgctgttcgtctacctccacctggac
ttggtgcactgcggcctgaagggggcagtggatggtttttacagccgtttccacaccctc
ttcctgcaggacagcgagcagcgcgccaccatagagcagctccgtcatgttctcacctct
caggacgtcgcagccaaccccaaactgagcgctttcctggagcacaagtacgtggtgcac
ctgacggagccggcgtacagctacctgctgcgatacctgcagagtgaggacaacagcgcc
atctgcagggcgctgaacacacacctgcaggtggaggtcaccgcgtccgtgcgcacagac
taccagctttatggagctgccagtggggcgactgctgccccaaacccctcctcctcctgg
gcaggagtagacggagtggagggtggggacggggtggaggttcctgcagggatccctcag
agcgaagtggccctcgaggctcttcaggactgcatcaagaaagtctgtgagggcccgccc
acgctcaccaccgtgtgtttctacgccttccacaacacggagcagatgctgaacacagcg
gaggtttctgccgacaaccggctgctctccgccggattcgacagctccaccgtgaagctg
tggagcctgagagccaggaaactgaaagccaaaccgcatcaggtcgacgtgtcgcacatt
cacctggcctgtgacgtactggaggaggaggaggaggaggaggacggctccggcagcgag
gtcaagacgctgcgaggtcacagcggcccggtgtttcgcacggccttcctgacggacagc
tccggcctgctctcctgctccgaggacaccacggtgcgctactgggacctgggcagcttc
accaacacggcgctgtaccgcggacacgcctaccccgtgtgggacgtggacctcagcccc
tgcagcctttacttcgccagcgggtcccaagaccgcaccgcacgcctctggacgttctcc
cgcacgtatccgctgcggatctacgccgggcacctggcggacgtcgactgcgtcaaattc
cacccgaactcaagctacctggccaccggatccacggataaaacggtgcgtctgtggagc
acccagcagggggcgtctgtccgcctgttcaccggacacagaggccccgtgctgtctctc
gccttctcccccaacgggaagtacttagcgtccgccggagaggaccagagggtgaagctg
tgggacttagcttcagggtcgttgtttaaagacctgaggggacacacggacagcgtcacc
agcctgtccttcagccccgacagcagcctggtggcctcgtcctctatagacaactcggtg
cgggtgtgggacatcagaaactctcacggcgtggcgccagccgatgggtcgtctaatgaa
atggtgggactttacacggggaacaccagcaacgtgctgaacgtccagtttatggcctgc
aacctgctgctggtgagcggaacagctcaggagaaaacagaacagtag

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