Gymnodraco acuticeps: 117555942
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Entry
117555942 CDS
T09661
Symbol
clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117555942 (clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117555942 (clp1)
Enzymes [BR:
gacu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
117555942 (clp1)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
117555942 (clp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
MMR_HSR1
TniB
AAA_16
AAA_22
AAA_18
CbiA
Motif
Other DBs
NCBI-GeneID:
117555942
NCBI-ProteinID:
XP_034086916
UniProt:
A0A6P8VA51
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MIGWERRDVIITGPATALVASEFGNLFHSTIRLEKIMATEGVETTSEEVPVPGKVSTRYD
LEKETELRFEVESGEAVEQIELELLTGMAEVFGSELNRNKKYTFGAGAKIAVFTWQGCSV
NLYGKPEVAYVSKDTPMLLYLNTHAALEQMRRQAERDNERGPRVMVVGPTDVGKSTVCRL
LLSYAVRVGRRPTLVELDVGQSGVSVPGTVSALCIERPADVEEGFSVQAPLVYHFGSTTP
GTNIKLYNKLTSCLAEVYSQRCEVNRKASVGGCIINTCGWVKGSGYQALVHCASAFEVDV
VLVLDHERLYNELKRDLPHFVRVVLLPKSGGVVERSKECRRDTRDEKIREYFYGFRGVTF
YPFSYEVRFSDVRIYKIGAPSIPDSCLPLGMSQDDTQLKLVPVTPGRDLTYHVLSVSSAE
DGEEGARKGIVESPVCGFIVVTNVDTQTQVMKVLSPAPRPLPRHTLLIMDIRFMDSK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgataggttgggaacgacgtgacgtcatcattacgggaccagccacagcgttggttgct
tcagagtttggaaacctatttcattctacaatacgccttgaaaaaataatggccacagaa
ggtgtggaaaccacaagtgaagaggtcccagtacctggaaaggtcagcaccaggtatgat
ctcgagaaggagactgaactcaggtttgaggtggagtcaggggaggcagtggagcaaatt
gaactggagctcctcacaggaatggctgaggtgtttggatcagagttgaaccgcaacaag
aaatacacatttggagcaggagccaagattgcagttttcacctggcaaggctgcagtgtg
aatctctacgggaagccagaggtggcttatgtttctaaagatactcccatgctgctctac
ctgaacacacatgctgccctggaacagatgagaagacaagcagaacgggacaatgagagg
gggccaagggttatggtggttggacctacagatgtggggaagtcaacagtgtgccggctt
ctgttaagctacgctgtaagggtgggccggcggccgacactggtggaactggatgttgga
cagagtggggtctcagtacctgggacagtttcggcactgtgcattgagcgcccagcagac
gtggaggagggtttctccgtccaggctcctttggtctaccactttggctctactacccca
gggacaaacatcaaactttacaataagctaacgtcatgcctggccgaggtgtattcccag
cgctgtgaggtgaacaggaaggccagcgtgggaggctgcatcatcaacacctgcgggtgg
gtaaagggctctggataccaagctctggtccactgtgcctctgcctttgaggtggacgtg
gtgctggtgctggaccatgagaggctctataatgaactcaaacgagacctccctcacttt
gtacgggttgtgctcctccctaagtccggaggcgtggtggagcgctccaaggagtgcagg
cgggatactcgcgatgagaagatccgcgagtatttctacggcttcaggggagtgaccttt
taccccttttcctatgaagtacgtttctcagatgtccgcatctacaagatcggagcacca
tccatcccggattcatgtttgcccctgggaatgtctcaggacgacacacagctgaagctg
gtgcctgtgactccagggagagaccttacgtatcatgtgctgagcgtgagcagcgcagag
gacggagaggaaggggctagaaagggtatcgtagagagccctgtgtgtggctttatcgtg
gtgactaatgtggacacacaaacacaggtgatgaaggtgctgtccccggcacccagaccc
ctgcccagacatactctgcttatcatggacatccgcttcatggacagtaaatga
DBGET
integrated database retrieval system
