Gymnodraco acuticeps: 117555970
Help
Entry
117555970 CDS
T09661
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117555970 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117555970 (atrx)
03036 Chromosome and associated proteins [BR:
gacu03036
]
117555970 (atrx)
Transcription factors [BR:
gacu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117555970 (atrx)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117555970 (atrx)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117555970
NCBI-ProteinID:
XP_034086951
UniProt:
A0A6P8WHQ7
LinkDB
All DBs
Position
Unknown
AA seq
2152 aa
AA seq
DB search
MSLASSESHQDQMSEKAEEPGSSTETMKPSSSRNRRKPTSVAKNTGAKGSDSSAESENEG
ATSDNPSDNNTSSASKGTLVMRPSGNENKGAMKLRVDFKQKPTDDTLQKKINCTACGKQV
MQLQRNAVYEHPALKVLICKSCYNYYTSDDINRDSDGMDEQCRWCAEGGKLICCDYCNNA
FCKKCILRNLGRKELSVITDENSKWHCYVCRSEPLQDLVSKCHSVLEKQELQSKQRKPDK
SEEREKKRHKNKEVKEHKPVVNGKEHGEGSGSMTFSYKKLQVPKEFLKKTKKLVETTTGL
NNTFIQFIQQAANEQEDKSIRYRHLKAFKAVLADLKKAHSALEEALGPELKNMELQNGNE
GQLIEREHSKVAASVENNHVDNVADATEGADVMEDADVAETADIAEDADVEAEDADVAED
ADVAEDADVEAEDADVAEDAEVEATQDAEVAETADIAEDADIEAEDDNIAEDDNVAEDAN
VAEDANVVAEEADVAMDADLADESDEADDPGVADEEEADVAAEEADLKQHNEKAMDMDQV
STETELKDSQTETDLNKKKIKTEVCDEGLVTAGEMSLDHDIMSVPPSVPEELFQMVESLA
DSTMLSQTGTDMVTDADTKLNKNSTNKSSQPKVKNLIVKLTPVPVVTTRGFTPSWSKNKE
KDGQLQKKSKKESDKEKGDAPNAVDGTESPPPSRRSSRLKTTPLRKQTEKRGKEESSDSE
LEEDRKGKTKSSKTSRNAKKEDGEETKDSEKSPVDSDSDEVPNVLLEKAAAGRSTDEEQG
STSAKKCLFKLNNTSTEDTDKASKRKRKSASSDSDSGNKSKKTSKKKKQKGSDNADSDSE
KEKETKSKVALGKRRSSRVKKQDEAKEGKGSTEKKATKLKRSYEKKRRGGSPKASTKLQS
SSSEDDDEEEEEKADGDSGDDSDAQKIKPIVEDNVVGGSGAFRQSSGDEDDDKEKVSQVF
EDDDDDDPENRIAKKMLLAQIKSNYSSGAESSSDDEDDKEAKSSKKAKKEDDDDDDDDDD
DDEEEQGDEDTGDSEDSDIEVKKRGGRHKLLRHKLSLSEGESGEEKAGSKEKKKGKKNKE
KVSSDDSSDSDFENSESSEQSGVSEELSESENEGKRRKTRSSKKKDEAKQRSYKQQKKKR
RRIKVQESSSSNEKSGDEDAEDRKGRKKLRKILKNDKLRSETRDALKEEEDRRKRIAERE
ALREKLREVLPPQIQQDISKVIVAEESSLMACPITTKLVLDEDEETKEPIVQVHRQLVTK
LKPHQVDGVQFMWDCCCESVKKIEKSSGSGCILAHCMGLGKTLQVVTLLHTLLLCEKLDF
STALVVAPLNTVLNWLNEFEKWQVGMKDDESLEVIELATVKRPQDRAYALQRWQDMGGVM
IIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDMVICDEGHILKNEASAVSKAMNSIR
TRRRVVLTGTPLQNNLVEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLQDVRI
MKKRAHILYEMLNGCVQRKDYTALTKFLPPKHEYVLSVRVTPIQCKLYRYYLENFTGVGN
AVEGGRGRAGTKLFSDFQMLSRIWTHPWCLQLDYISKENRGFFDEDSMEEFIASETEEES
SMSMTSEDEKAKKKKKRGKGKKKGSEDSDSDEVEVIKEWNTSTRGKNGEGRVRPEPVEEP
RHASSPDWHKEFVTEADAEILEHSGKLTLLFEILRMAEEVDEKVLVFSQSLISLDLIEDF
LELSCRAKDENKVSPYKGEGKWFRNIDYYRLDGSTNALTRKKWAEEFNDINNPRGRLFLI
STRAGSLGINLVGANRVIIFDASWNPSYDVQSIFRVYRFGQIRTVYVYRFLAQGTMEDKI
YDRQVTKQSLSFRVVDQQQIERHFTTNELTELYIFDPDMLEESSEKKSKRATPLLPKDPF
LAEMLQNNKDQIMCYHEHDSLLEHKGEEALSEEDRKAAWAEYEAEKKGVFVKSNYQVGYP
QMDMGASNYFSFNMAALASMSNQQLEDLINQGRQKVIEATNSLKSITREPLEDIIGRVWK
ENPSFNEAQVQSMALGRQSTVELEFKHREAVYRDVLTRQQTLMMYVQKLITNRKVQEQQL
AMQNQANYLQQLAMQNGMMGGAGLSQMDLVGLYQQLHGLGGMGKNPGPSKGL
NT seq
6459 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcatcttctgaatcacatcaagaccaaatgtcagaaaaagcagaggagcct
ggtagctcaacagaaactatgaagccttcctcttctcgcaacaggaggaagcccacttct
gtggctaagaacactggagcaaaaggatccgactcgtcagccgagagtgaaaatgaaggt
gcaacttctgacaatccttcagacaataacacaagcagcgcttctaaaggcactttagtg
atgagaccatctgggaatgaaaataaaggcgccatgaagctgagagtggatttcaaacag
aaaccaacagatgatacattgcagaagaagataaactgcactgcctgtggaaaacaagta
atgcagttgcagcgtaatgcggtgtacgagcatcccgcgctcaaagtactaatttgcaag
tcatgctacaattattacaccagtgatgacattaacagagactccgatgggatggatgag
cagtgcaggtggtgtgctgaaggtggcaagctcatctgttgtgactactgcaacaacgct
ttctgcaagaagtgcatcctgcgcaacctgggcaggaaggagctgtctgtcattactgat
gagaactcaaagtggcactgctatgtctgcaggtcagagcccctccaggatttggtctcc
aaatgccacagtgtccttgaaaaacaagaacttcaatccaagcaacgaaaaccagacaaa
agcgaggaacgtgagaaaaagagacacaagaataaagaagtcaaggagcacaagccggtt
gtcaatgggaaagaacacggcgaaggctcagggtccatgactttctcctacaaaaaactg
caggtacccaaagaatttttaaagaaaacaaaaaagcttgttgagactacaacaggtctg
aacaatacgttcatccagttcatccagcaggcagccaacgagcaggaagataagtctatc
agataccggcatttgaaagccttcaaggccgtgcttgctgatttaaaaaaagctcacagt
gctttggaggaggctttggggcctgaattaaaaaacatggagttgcagaatggtaacgaa
gggcagcttattgaaagagagcactctaaagtcgctgcttctgtagaaaacaaccatgtg
gataatgtggcagacgcaacagagggtgctgacgtaatggaggatgctgacgtagcggag
accgctgacatagctgaggacgctgatgtagaggcagaggatgctgacgtagcggaggat
gctgacgtagctgaggatgctgatgtagaggcagaggatgctgacgtagcggaggatgct
gaagtagaggcaacgcaggatgctgaagtagcggagaccgctgacatagctgaggacgct
gacatagaggcggaggatgataacatagcggaggatgataatgtagcggaggatgctaac
gtagcggaggatgctaacgtagttgcagaggaagctgatgtcgcgatggatgctgacttg
gcagatgaatctgacgaagcagatgaccctggcgttgcggatgaggaagaggctgacgta
gccgcagaagaagcagacctgaagcagcataatgagaaagccatggacatggatcaagtg
tcaactgagactgaacttaaagacagccaaacagaaactgatctcaacaaaaagaaaatt
aaaactgaagtatgtgatgaagggctcgtgacagcaggtgaaatgtccctcgatcatgac
atcatgtctgtacctccatctgttcctgaggagctttttcagatggtggagagtcttgcg
gattctaccatgctctcccagaccggcactgatatggtcacagacgctgatacaaagtta
aataagaactcaacaaataaatcctcccagcccaaggtgaagaacctcatagtcaaactg
acccctgtgcctgtcgtgacgacacgtgggttcacgccctcctggtccaaaaacaaagaa
aaggatggacagctgcaaaaaaaatccaaaaaagaaagtgacaaggagaaaggcgatgcc
cctaatgctgtagacgggacagaaagcccaccaccaagccgtcgctccagtaggttgaag
accactccattgaggaagcagactgagaaaaggggtaaggaagagtcctctgattcagag
ttggaggaagatcgtaagggcaaaaccaagtcctccaagacatcaagaaacgccaagaaa
gaggatggggaggagaccaaggattcagagaaaagtccagtggattctgactcagacgaa
gttccaaacgtactgttggagaaagcagcagctggccgcagcactgatgaggaacaggga
agcacaagtgctaaaaagtgtttattcaaactaaacaacacatctacagaagacacagac
aaagcatccaaacgcaaaaggaaatctgcaagctccgattcagactctggaaacaaaagt
aaaaagacgtccaagaagaagaaacaaaaaggctcagataacgccgactctgactctgaa
aaagagaaggagacgaagagtaaagtggccttagggaagaggagatctagccgtgtgaag
aaacaagacgaagcaaaagaaggaaaaggatcaacagagaagaaagcaactaagctgaag
aggtcttatgaaaagaagcgcaggggagggagcccaaaagcatccaccaagcttcagtcg
tcgtccagtgaagatgatgatgaggaggaggaggagaaggctgatggagactccggagat
gacagtgatgcacagaagatcaaacccatcgtggaggataacgtggtgggaggcagtgga
gctttccgacaatcctcaggtgacgaagatgacgataaagagaaggtctctcaggttttc
gaagatgacgatgatgatgatcctgaaaacaggattgcaaagaaaatgcttcttgcccaa
ataaagtcaaactattcttctggagcggagagctcctctgatgatgaagacgataaggaa
gcaaagtcctcgaagaaagctaaaaaagaggatgatgatgatgatgatgatgatgatgat
gatgatgaagaagagcagggagacgaggacacaggcgactctgaggattctgatattgaa
gtgaagaagcgtggtggacgacacaaattgcttcgtcacaaactctcgttgagtgaggga
gaatcaggagaggagaaagctggcagtaaagagaagaaaaagggcaaaaagaacaaggag
aaagtgagcagcgatgactcttcggactcggactttgagaactcagagtcaagtgaacag
tcgggggtaagcgaggagcttagtgaatcggagaatgaaggaaaacgcagaaagaccaga
tcttcaaagaagaaggatgaggcgaaacagagaagttacaagcagcagaagaagaagcga
cgcaggatcaaagttcaggaatcctcttccagcaatgagaagagtggagatgaagacgcc
gaagaccgcaaaggacgcaaaaagctccgcaaaatcctgaagaatgacaaactgcggtca
gagacgagagatgctctgaaagaagaggaggataggaggaagcgtatagctgagagagaa
gcactcagggagaaacttcgagaggtgcttcccccgcagattcagcaggacatttccaaa
gtgattgtggcggaggagtcttccctgatggcctgtcccatcaccaccaagctggtgctg
gatgaggatgaggagaccaaggagccgattgtgcaggtgcacaggcaacttgtcacaaaa
ctcaaacctcatcaggttgacggggtgcagttcatgtgggactgttgctgtgaatctgtg
aagaagatcgagaagtcttctggctccggctgcatcctcgcccactgtatgggtctgggg
aaaactctgcaggtggtgacattacttcacactttgctgctgtgtgagaagctcgatttc
tccacagccctggtggttgctcccctgaacactgtcctcaattggctcaatgagtttgag
aagtggcaagtgggaatgaaggatgatgagagtttagaggtgattgagctggccacagtg
aagaggccacaggaccgagcatacgcccttcagcgatggcaggatatgggtggcgttatg
atcattggatatgaaatgtatcgaaacctgacgcagggcaggaacatcaagagcaagaag
ctcaaagagacctttcagaagactctggtagacccaggtccagacatggtgatctgtgat
gaaggtcacatcctgaagaatgaggcgtctgctgtgtccaaagcgatgaactccatccgg
acgagaaggagggtggtgctgacgggaacgcctctgcagaacaacctcgttgaataccac
tgcatggtgaacttcatcaaggagaacctgcttggttcagtgaaagagttcaggaaccgc
ttcattaaccccatccagaacggtcagtgtgccgactccacactacaagatgtccggatc
atgaagaagagggctcacatcctctatgagatgctgaacggctgtgtccagaggaaagat
tacacggcactcaccaagttcctcccacccaaacacgagtatgtgctgtcggtccgagtg
actccgatccagtgtaaactctacagatactacctggagaacttcacaggtgtagggaat
gctgtggaggggggccggggccgcgccgggaccaaactcttcagtgatttccagatgctc
agcagaatctggacccatccctggtgccttcagctggactacatcagtaaagaaaacagg
ggtttctttgacgaggacagtatggaggagttcatcgcttctgagacggaagaagagtcc
tccatgagtatgacctctgaggatgaaaaggcaaaaaagaaaaagaagcgaggcaaggga
aagaagaaaggctctgaggactcggacagtgacgaggtggaggtcatcaaggagtggaac
accagcaccaggggcaagaacggagaaggtcgagtccgaccagaacctgtagaagaacct
cggcacgccagctctcctgattggcacaaggagtttgtcacagaggctgacgctgagatc
ctggagcactctggaaagctgacgctactctttgagatcctgcgcatggcagaggaagtt
gacgagaaagtgttggtgttcagtcagtctctcatctctctggacctgattgaggatttc
ctggagctgtcttgcagagctaaagacgaaaataaggtttctccatacaaaggtgaaggc
aagtggttcaggaacatcgactactatcgcctggatggctccaccaacgccttgaccagg
aagaagtgggctgaagagtttaatgacatcaataacccaaggggtcgtttgttcctaatt
tcaacgcgagccggctctctcggcatcaacctggtgggagccaacagggtcatcatcttc
gacgcctcctggaacccctcctacgacgtccagagtatcttcagggtttaccgctttggc
cagattaggaccgtctatgtgtacaggttcctggcgcagggtacaatggaggacaagatt
tacgaccggcaggtaaccaaacagtctctgtcgttccgggtggtggaccagcaacagatc
gagaggcacttcacaaccaacgagctgacggagctctacatattcgacccggacatgctg
gaagaatcctcggagaagaagagcaagagagccacgcccttgcttcctaaggatcccttc
ctggctgagatgctgcagaataacaaggaccagatcatgtgttaccatgaacacgactcc
ctgctggagcacaagggggaggaagccctgagcgaggaggatcgcaaggctgcctgggcc
gagtacgaggcagagaaaaagggtgttttcgtgaagtccaactaccaggtgggataccct
cagatggacatgggcgcctccaactacttctccttcaacatggcggctttggcctccatg
tccaaccagcagctggaggacctgataaaccagggacgccagaaagtcatcgaagcaaca
aattcattgaagtctatcacacgggagccgctggaagacatcatcggcagagtgtggaag
gagaacccctccttcaatgaagctcaggtgcagtccatggctctgggccggcagtccacc
gtggagctggagtttaaacaccgagaggccgtgtaccgggacgtcctgaccaggcagcag
acgctgatgatgtacgttcagaagctgatcaccaacaggaaggtgcaggagcagcagctg
gccatgcagaaccaggccaactacctgcagcagctggccatgcagaacggcatgatggga
ggcgctgggctcagccagatggacctggtgggtctctaccagcagctccacggcctgggg
ggcatgggcaagaacccgggtccctccaagggcctgtag
DBGET
integrated database retrieval system
