KEGG   Gymnodraco acuticeps: 117555973
Entry
117555973         CDS       T09661                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
gacu  Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gacu03036]
    117555973 (kdm3b)
Enzymes [BR:gacu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     117555973 (kdm3b)
Chromosome and associated proteins [BR:gacu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117555973 (kdm3b)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2
Other DBs
NCBI-GeneID: 117555973
NCBI-ProteinID: XP_034086955
UniProt: A0A6P8VK90
LinkDB
Position
Unknown
AA seq 1781 aa
MGDSLELIGKRLFLLLDDGRSANGSEPEQAAWARDWLRGTVRAVSVIGLAAPEGGEATTT
SPAAGLTVFVEFENVVQSCSWVQVYDKGVKALLVEDSIVWANRSDGTGTAGAPTSSAAWP
ALVFRSLVDRVGLGSVVPVEYFGNKNFEFLSDNTTFQRFEVDKDLRHPLLLEQPSLQTAV
SSWRTDFELQEIFRKGSYTIQGRRVRVYQPEFEDYWASGLVSQHDPISHIMEITLDKGDE
TQMVDPRVIHVMLAEEENGRRRKDSDTMKGDSGRRRRTASEGEDDLNLKRFKGAGDTAAD
GQSCGDFNKTAVEGMGIWGGDSGERVSSTTKNGSSSERTFPQGRVSAPNTNSSLQMDQSN
ATPSRFPAHVKENGRPLSTQGAADSTTAVTHTPTPPPLKPAPSPFSTTSFPSLGQMPSLV
PGAPAPKASSSPQTDREEASQSAYSKTAALVSPGPVTISWSHDSGPSVALSASVGFTPKA
PTWGSQTEGSKTASGFRMPQTGPSQTNGAPSTTTASQDTPRPFGFGFGGAKNETQSKQDQ
NLFIQCMTQNSGSSPSLAAGQTQSKDTNYFTAVSESLSKEPPSLFKSTASTEGQKKHEQP
KVPETHTAGNGVLNKSSSTFQGMASSAGGRGPGLSIGGLPAASGAQSTSKKSSNNGTSVG
GLGLQSGFNTSDSHQNLFLQASKEPANPFLAYGDKTAHTSFAGLSGAESQTLGSASDSKP
NLFTMAEPPKGILSSPFPAPSAAASPSSSSSPVPTSSQRSQSEGTVAKEEQEVGEMPSST
SACPLFGSTGPGGIEDVPASFDQSQSQKFSLEDRGQSSKRDSGDSSCNSDLSDLSENEDG
PVKGQIPGRPPLPVKDAAMMQKTKVQGVAKGRPRNKPFKVGQSVLKDQSKVRRLKQSGES
FLQDGSCINVAPHLHKCRECRLERYRKYRTTGEDSDDDDPNVSCRFFHFRRLAFTRKGIL
RVEGFLSPQQSDSMAMGLWLPAPAVQEGLDLDTSKYILANVGDQFCQLVMSEKEAMMMVE
PHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRRNRPREDVDERPE
DEVFSWLKCAKGQPHEPQNLMPTQIIPGTALYSIGDMVHSARGKWGIKANCPCTSRHTKS
LVRPSAPNGIPQQSASSSSGVLAAASAFGTTPKSEGETSAVKTETAQTAAPSDSGGGEHV
GSISNSTSGTSSPCNHTQSTAKESRSAGEGNSSALHWLADLATQKAKDDTKDSGSLRSMM
SQNSRPHFGLDSLSALSKPSASSPKLFNSLLLGSSMAQSKPEGSSLRDLLNSGPGKLPQG
PGESGVPFPSVFTSAGSDKLKSSLPNFLDHIIASVVETKKAEGRRTGASEGGELGVLGGR
KDGVMGLSVLEPHTSHSWLCDGRLLCLQDPSNSNNWKIFRECWKQGQPVLVSGIHKRLKE
NLWRPDAFSREFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIISKRLQDTEGHPMVLKLK
DWPPGEDFRDMMPTRFDDLMDNLPLPEYTKRDGRLNLAARLPNFFVRPDLGPKMYNAYGL
TSSEDRKVGTTNLHLDVSDAVNVMVYVGIPQIEGDPGKEADINGRKEVMTTIEEGDVDEM
TKRRVYEQQEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQVL
RRRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQ
EFRHLSTTHTNHEDKLQVKNIIFHAVKDAVGTLKAHEPRRP
NT seq 5346 nt   +upstreamnt  +downstreamnt
atgggggactctctcgagctgatagggaagcgtctctttctgctcctcgacgacggcagg
tctgcaaatggatccgagccggagcaggctgcctgggcccgggactggctgcggggcacg
gtgcgggcggtgagcgtcatcggcctggccgccccggagggaggagaggcgacaacaaca
agccctgctgcagggctgacggtattcgtggagtttgaaaatgtggtgcagagctgttct
tgggtgcaagtgtatgacaagggggtaaaagcactgttggtggaggactccattgtttgg
gccaatcgaagtgatggcactgggaccgccggggccccaacatcctccgcagcctggccc
gctctggtcttccgttccctggtggacagagtgggtttaggatcggttgttcctgtggag
tattttggaaacaagaattttgaattcttgtctgataacacaacttttcagaggtttgag
gttgacaaagacctgagacaccctttgcttttggagcagccctccctgcagactgccgtc
tccagctggcgtactgactttgaactgcaggagatcttcaggaagggttcctacaccatt
caaggacgcagggttcgtgtgtaccagccagagtttgaagactactgggcctcaggactg
gtctcacagcacgacccgatctcacacatcatggagattaccttagataagggagacgaa
acccagatggtagatcctcgtgtgatacatgtcatgctggcagaggaggagaatgggcgg
cgaagaaaggacagtgatacaatgaagggtgacagtgggcgcaggcgcaggactgcgtcc
gaaggcgaggatgacttgaacttgaagcgttttaaaggagcaggcgatacggcagctgat
gggcaaagctgcggcgacttcaacaaaacagcagtggaagggatggggatctggggcgga
gactccggcgaaagggtcagcagcacgaccaaaaacggaagctcgtcagaaagaaccttt
cctcaaggcagagtgtcggcccccaacactaactcctcacttcagatggaccaatcgaac
gctaccccttctcgctttcctgcccatgtgaaagaaaacggtcgcccactctccacacaa
ggtgcagcagactccactaccgccgttactcacactcccactcctcctcccctcaaacct
gccccctctcctttctccaccacgtcttttccctcactaggccagatgccaagcctggtc
cccggagctccagcccccaaggcctcctcatccccccaaaccgaccgagaggaggcctca
caatcagcttattccaaaacagctgctcttgtttccccgggccctgtcaccatttcttgg
tcgcatgacagcggccccagtgtggcactctctgcgtctgtgggttttactcctaaagcc
cccacctggggaagccagactgagggctccaaaacggcgtcaggttttcgtatgccccaa
actgggccctctcagaccaatggagctccttccaccaccacagcctcccaggatactccc
aggccctttggcttcggctttggaggagcaaagaatgagactcaatccaagcaagaccaa
aacttgtttattcaatgcatgactcagaattctgggtccagcccaagcctagctgctggt
cagacccagtccaaggacaccaattatttcaccgcagtgtctgagagcctgagtaaggag
cccccaagccttttcaagtccacagcctccactgaagggcagaaaaagcatgagcagccc
aaagtgcctgagacccatacagcgggaaatggtgtgctcaataaatcgtcatcgaccttc
cagggcatggctagctctgcaggaggaagaggtcctggtctgagcatcggtggtctccct
gcagcctctggagctcaaagtacttctaagaagagcagtaataatgggacttctgtggga
ggcttaggactgcaatctgggtttaatacttcagatagccaccagaaccttttcctgcag
gcctccaaagagcctgctaatccatttctggcatatggggacaaaactgcccacacctcc
tttgctggcctctcaggggccgagtcacagacccttggttctgcctcggacagcaagcca
aacctgttcactatggccgagccacctaaggggattctgtcttcccctttcccagcaccc
tcagcagctgcgtcacccagctcttcgtcttcaccagtaccgacttcatcacagaggtca
cagagtgaagggactgtggcaaaggaggagcaggaagttggagagatgccttcatccacc
tcagcatgccccttgtttgggagcaccggcccaggtggaatagaagatgtcccggcgtcc
tttgaccagagccagtctcagaagttctccctggaggacaggggccaatcgtccaaacgt
gactctggtgactccagctgcaacagtgacctgtcagacctgagtgagaatgaagacggc
ccagtgaaaggccagatcccaggacgaccaccactccctgtcaaggatgctgccatgatg
cagaaaactaaggtccagggggtagctaagggccgtccacgtaacaagccttttaaagtg
ggccagtctgtactgaaagaccagagcaaagtccggcgtctgaagcagtctggcgagtcc
ttcctccaggacggctcctgcatcaatgtggcccctcacttgcacaagtgccgcgagtgc
cgcctggagcgctaccgtaaatatcgtactacaggcgaagacagcgacgacgacgaccca
aatgtgtcctgtcggttcttccacttcagaaggttggctttcactcggaaaggtatactg
cgtgtagaaggcttcctgagtccgcagcagagcgattccatggccatgggtctgtggcta
cctgctcccgccgtccaagagggcctcgacctcgatacatccaagtacatcctggccaat
gtgggagaccagttctgccagttggtcatgtctgagaaggaggccatgatgatggtggag
cctcaccagaaagtggcatggaaacgagcagtgcgcggtgtcagagaaatgtgtgacgtg
tgtgagaccacgctcttcaacatccactgggtgtgtcgtaagtgtggctttggagtgtgt
ctggactgctatcggctccgcaggaacaggccaagggaggatgtagatgaaaggcctgag
gatgaggttttctcttggttaaagtgtgccaagggccaacctcatgagccacagaacctc
atgcctacacagataatacctgggacagctctttacagcattggcgacatggtgcactcg
gcgagaggcaagtggggtattaaggccaattgtccttgcaccagccgacacaccaagtct
ctagtacgccccagtgccccgaatgggattccacagcagtctgcatcaagcagtagtggc
gtcctcgctgcggcttcggcttttggcaccaccccaaaatcagagggagaaacatcagca
gtcaaaacagaaaccgcacaaacagcagcgccatcagacagcgggggaggagaacatgtt
ggcagtatcagtaactccaccagtggtacatcctccccctgtaaccacacccagtccact
gccaaggagtcgcgctcagcaggggagggcaacagctcggctctgcactggctggcagac
ttggccacacagaaagccaaggatgacaccaaggattctggttcactccgctccatgatg
agtcaaaacagccggcctcacttcggcctggactcactcagtgccctttcaaagccttct
gcttccagtcctaagctatttaacagtctgttgctgggctccagcatggcccagtccaaa
cccgagggctccagtctccgggacctgctcaactccggaccggggaaactcccccagggg
cctggggagagcggggtgcctttcccctctgtctttacctcagcagggagtgacaagctg
aagagcagcctcccgaacttcctggatcacatcatcgcttcggtcgtggagaccaagaag
gcagaaggccgccggaccggggcctctgagggcggagagctcggggtgttggggggccgc
aaagacggagtcatgggcctaagtgttttggaaccacatacctcccactcctggctctgt
gacggacgactcctctgcctacaggaccccagcaacagcaacaactggaagatcttcaga
gagtgctggaagcagggacaaccggtgttggtgtcggggatacataaacggctgaaagag
aatttgtggcggcctgatgctttcagtagggagtttggtgaccaggatgtggacctggtc
aactgtagaaactgtgctatcatctctgatgtgaaggtacgagacttctgggacggcttc
gagatcatctccaagcgactgcaagacactgagggccatcccatggtattaaagttaaag
gattggcctccaggtgaagactttagggacatgatgcccacaaggtttgatgatctgatg
gataacctccctttgcccgagtacacaaaaagagacggccgtttaaacctcgccgcccgt
ctgcccaacttttttgtgcgtcctgatcttggacctaagatgtacaacgcctatggcttg
acctcctctgaagacaggaaggtgggaaccacgaatctccatctggatgtctctgatgcc
gttaacgtcatggtctatgttggcatccctcaaatagagggagacccggggaaagaggca
gatatcaatggacgcaaagaggtcatgaccaccatcgaggagggcgatgtggatgaaatg
accaagaggagggtgtacgagcaacaggagaaacctggagctctctggcacatctacgct
gcgaaggatgcagagaagatcagagagctgctccgcaaggtgggagaggagcagggtcaa
gagaaccctccagaccacgaccccattcacgaccagagctggtacctggaccaggtgctc
cgccgcaggctctatgaagaatacggcgtccagggttgggccattgtgcagttcttagga
gatgccgtgtttatccctgctggagcgccacaccaggtgcacaacctgtacagctgtatc
aaggtggcagaggactttgtgtctcctgagcacgtgaagcactgtttcagactgacccag
gagttcagacacctgtccactactcatacaaaccacgaagacaagctacaggtgaagaac
atcatctttcatgcagtgaaggacgctgttgggacactgaaggcccatgaacctagacgc
ccttag

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