Gymnodraco acuticeps: 117556005
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Entry
117556005 CDS
T09661
Symbol
si:dkeyp-44a8.4
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24355
collagen type XXIII alpha
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gacu00536
]
117556005 (si:dkeyp-44a8.4)
Glycosaminoglycan binding proteins [BR:
gacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117556005 (si:dkeyp-44a8.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
117556005
NCBI-ProteinID:
XP_034087012
UniProt:
A0A6P8WHX6
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Position
Unknown
AA seq
634 aa
AA seq
DB search
MFIHRTVKQDFTMDTASHSIGESKPVCEFAPKSSVQRWLPGFPIALCLLLSMSSITVCLL
MSLKTFQLESRMQMEMDKASIFQPPHRACLNEDGTLTPELSSSVGKFVEEKVVVLLPKLR
TTRDVGQECSCPPGPPGKRGRMGRRGEAGLPGKAGRDGYPGPLGLDGKPGSPGPKGSQGP
AGPKGDKGDQGDVGPRLAFPRYDHGFITGDQSGSFQRRFLKGDQGQAGAAGPPGPPGPPG
PRGPPGNTGKDGPRGPAGESGFPGLDGVEGSQGTPGKTGEDGEPGYPGSQGPQGAKGEAG
TGEKGERGMDGLQGFRGDNGEIGEQGPQGSMGYPGEKGDAGSSDIIDFNGKLLDAFQAIN
TISVSGPPGPPGPPGPSGPTGEKGELGLPGPAGFDGQKGPQGDIGEEGPAGHTGEKGEMG
LSGPAGMDGHKGEKGDYRIEDNLVQRISQPGPPGPPGIPGAPGSMGLHGMPGPKGEPGYG
MKGEQGDYGAPGPKGLDGPMGLSGSTGVVGLPGSKGEKGRTGEPGLDGFPGLMGDKGDRG
ERGDKGDRGSVGKRGLKGQKGEQGPPGLDQPCPVGCGETKGVSEEAGHSPPPPPPPSGPE
APCPVGQDGLPIPGCWHKEKMAKQKLKRKRLSQP
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgttcatccacaggactgtaaaacaggattttacaatggatacagccagccactctatc
ggggaaagtaagcctgtgtgtgagtttgcgcccaagtcttcggtgcagcggtggcttcca
ggttttcccatcgctctgtgcctgctgctgtctatgagctccatcaccgtgtgtcttctg
atgagcctcaagaccttccagctggagagccgaatgcagatggagatggacaaagcctcc
atcttccagccgccgcacagggcttgtctaaacgaggatgggaccctaactccagagctg
agctcatcagtagggaaattcgtggaagagaaagtggtggtgctgttgccaaaattaagg
acaactagggacgttggccaagagtgctcctgccctccagggcctccaggaaagcgtgga
cggatgggaagaagaggggaagccggcctgcctggcaaggctggacgggatggatacccg
ggtcctcttggcttggatgggaaaccaggttctccaggtcctaagggaagccagggacca
gccggacccaagggagataagggtgaccaaggagacgttgggccaaggttggccttcccc
agatatgaccatggctttatcactggagatcagtccggtagctttcagagacgctttctg
aagggtgaccaaggccaggctggcgccgctggtcctcccggtcctccgggcccccccggc
cccagaggcccccctggaaacacaggcaaggatggtccacgtggccctgctggagagtcg
gggtttccaggtcttgatggtgttgaggggtcacaaggaacgcctgggaagacgggagaa
gatggtgagcccgggtatccagggtcacagggtcctcaaggagcgaagggcgaggcaggc
acaggagaaaaaggagaaagaggcatggatggacttcaaggatttaggggagacaacgga
gaaataggagagcaaggaccacagggatcgatgggttatcctggtgaaaaaggcgacgca
ggctcctcagacatcatcgacttcaatgggaagcttctagatgctttccaggccatcaac
accatcagtgtttcgggcccacctggaccacctggaccacctggaccctcaggcccaaca
ggggaaaagggtgagcttggtttacctgggccagcaggatttgatggacagaagggacct
caaggtgacataggtgaggagggaccagctggccacacaggagagaagggggagatgggg
ctctctgggcctgctggaatggacggtcataaaggagagaagggcgactacaggatagag
gacaacctggttcagaggatttcacagccgggcccacctggcccaccaggaattcccggg
gcccctggatccatggggttgcatggtatgcccggtcctaagggtgagcctggatacggg
atgaagggagagcagggggattatggtgctcctggccccaaaggattagatggtcccatg
ggactaagtgggtctacaggggtagtgggcctcccaggttcaaaaggagaaaaaggcaga
acaggagagcctggattagatggtttcccaggtctgatgggagacaagggtgatcgaggg
gaaagaggagacaagggtgacaggggatcagtgggaaagagaggactaaagggccagaag
ggagagcagggtcctccaggcctggaccagccttgtcctgtgggttgtggtgagactaaa
ggtgtttctgaggaggcagggcattctccccctccacctcctcctccttctggccctgag
gccccctgtcctgtgggacaggacgggctgcccataccaggctgctggcacaaggagaaa
atggcgaaacagaagctcaaacgcaagcgtctctctcagccctga
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