Gymnodraco acuticeps: 117556103
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Entry
117556103 CDS
T09661
Symbol
pcm1
Name
(RefSeq) pericentriolar material 1 protein isoform X1
KO
K16537
pericentriolar material 1 protein
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gacu03036
]
117556103 (pcm1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gacu03037
]
117556103 (pcm1)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
117556103 (pcm1)
Cilium and associated proteins [BR:
gacu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117556103 (pcm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCM1_C
Motif
Other DBs
NCBI-GeneID:
117556103
NCBI-ProteinID:
XP_034087163
UniProt:
A0A6P8VA49
LinkDB
All DBs
Position
Unknown
AA seq
2153 aa
AA seq
DB search
MATGGTPFDDSAEELHDWTITNGSLEDRLNNLDWGVQQKKANRSSEKNKKKLSAMVVESR
LTNDISPESTPGAGRRRSRTPHSFPHIKYSTQMSVPDQAELDKLRQRINFTDLDERSIGS
DSQGRATAANNQRQLAGENKKPYNFLPLHVNTNKSKELLHPSSSAPATPAITKETKKQGP
GLRDTLTPLVSSKEAQRLTRGSTERRPLAHREYGRGEPRIDSSQVVSKLVQIREYISKAS
SMRDDLVEKNDVPANVERLSHLIDHLKEQEKSYLRFLQKMLTRENDEDEVGTLDSAVGSG
SLAESTSLNIEVRSSDASNATGGRTEMVRADQKEELENLRKQHELLKKMLEQQEQLRALQ
GRQEALMAMQDSAEQALAVIEDTVVTETTGSVSGLSITSELNDELNDLIQRFHNQLHDSQ
TKAVPDNRRQAESLSLSREVCWSRAPQAVGPPQHRPLLHSASGPHTGLDMGATAASAKLT
KLQELQDKKQTMDKILQELHSLRDQTLNNNSCRGLSTQCSLSMGASSDCPSALCSNGASA
STSFHPSLTQHQNSSNSTDKLRKLKEVHKRLNELRELVQYYEQTSDMMVDAVNENVKEDD
DEEEEEEDETEDSSMFDALFDSEQENRQPVTNIRNPQRSGNWTDLNSLTNRRAVRGSATN
NRDGRLNTECEINNRSAANLRSLNIPSAIECQYNRDTPYNRVKDDDEDEDRLDNEEGAQA
AAPDSEASGSSRRSSLGNNGGFAQKVHRHTAKQKLRQLQELVAMVQSDDTDGTTANEDEA
IHQQPNNTRATVARSLGAGSKQSPRELTLSSNAREKLYEEKLRQQKQELKQLHEERQRLI
EIQGKIHDLQWACPDLQSSLSSAVSQQGLLRKLPVAVSTPATVLPSPSGPKTNSAVLKPT
APEAASPSVTDNEQLWSEMRRHQILREELRQRRKHLESLMAEHQRRSGVGDSPRQMDDSE
GLASPSQPVSRDERTMATWGSSPCHLDDDDDDDDDDDEDDDEDEYQSEIGAEEEEEHEEC
ADSSSDDDIHIYSSSRNQCSYSNRKNQGSNLKPPAAFSGDGSGDPSLQNKANAKQQQQQP
RIMNQSASSQHGATRRQENLRWASELSFAEGSSQWQEQVSQLQRQLDFSTSMCQTLLQDQ
QTLSYMLQTLLTGQYSVFPNNVSSPQVHLIMHQLNQSYTQLAWQQNNAQRLKQVLNDLLL
QQQQQQQQQQQQQQQQQQQQQQQQQQQASSSAAGWQTQTQKPGSSQESSSGPSASPGVFL
PFSSNLQPSTNNMSTAALSPFPPGFNLYPLFPAPMGEFPQSAAGQPAPDQRKQQLDPNAS
IKTEYMSFPPPLQRSPLNTTTETGASGWLNTSYVNNTVQHHQSNTEHQESPSSSPMFASR
HPRHQEFDRASQESFSTMPDPVDPTTITKTFKAGRKASAQANLASRTKTPNSKSRRRRGK
GLKNSEGHESDSVSSTADFVQERAALSRQKDQNKSLLDRLTQEKLDSKSNLGSKRNDLSS
AYAWRTPFLSNRIACTEAPDASSDLRETIYSEVATLISQNESRPHFLIELFHELQLLNTD
YLRQRALYSLQDIVSRHLSERSAAEELPPLGPVVWAAGSQSELTPSESLATSDAEVVEKN
LRLTMKKRDDAESVGNDSNMSTSSNLEPFANDDLGNTVIHLDKALARIREYERMKLKAEF
NPFNGSSAGAGELSLAEHPSASLAAPVEGGAAGDVHCPQIDTQQLDRQIKAIMTEVIPFL
KENMDEVCSLQLLTSVRRMVLTLTQQNDESKEFVRFFHRQLGGILQDSLSTFVGRTLNEC
GEDLLVEISEILFNELAFFRLMQDLDSSSIALATKHKNKKRAEPPMRAKNSLKENIVAGA
DTSMSPAYTDEDKDQDEAEQEGAASLQELYLQRERKNTRSSEASEGEDEEEDEQGGQGIR
LSISLSKAETQALTNYGSGEDENEEEEMEEFEAGPVDVQTSLQASADGHVEREETMLSQT
HESRAEHRSSEIHDEMNNSAAVTAEHRDMKECQSAEEEERGGGGGGGGGGGGGGGAASEE
PSDEVSHHQDPDPKESHTTSSPDSDSPVMINVDEMGSGNTSQKSDEEDFVKVDDLPLQLS
VMCEEELQKRIVEEQQNNSLSVEILNGNTESLTGLVGNPQALKEPDTLGAQSV
NT seq
6462 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggaggcactccttttgatgacagtgcagaagagctgcacgactggactata
accaatggcagtctggaagatagactcaacaacctggactggggcgttcagcagaagaaa
gcaaaccgatcctcagagaaaaacaagaagaagctgtcagctatggtggtggagagccgc
ctgactaatgacatttcaccagaatccacccctggggccggtcgcaggagatcccgcacc
cctcattcctttccccacatcaaatactccacccagatgtcagtcccagaccaggctgag
ctggacaagctgcgtcagagaatcaattttacagacctggatgagaggagcattggcagt
gactcccaggggcgtgccacagctgccaacaaccagaggcagctggctggagagaacaag
aagccctacaacttcctacctcttcatgtgaacactaacaaaagcaaggagctgctccac
ccctcctcgtctgccccagccacaccagctatcaccaaggaaaccaagaagcagggccca
ggactcagggatactttaacccctttggtttccagcaaggaagctcaaaggctcacccgt
ggcagtacagagaggaggcccttagcgcacagagagtatgggagaggagagcccagaata
gacagcagccaggtggtgagcaaactggtacagatccgggagtacatcagtaaggccagc
tccatgcgggacgacctggtggagaagaacgatgtgccggccaatgtggagcgtctctcc
catctcatcgaccacctcaaggagcaggaaaagtcatatttacggtttctgcagaaaatg
ctgacacgggagaatgatgaggatgaggtggggaccctggactccgcagtgggctcaggt
tcacttgctgagagcacttctcttaacattgaggtccgatcctcagatgcttcaaatgca
acgggcggacggacagaaatggtgcgagctgaccagaaggaagagttggagaatctgcgt
aagcagcacgagctgctgaagaagatgctggagcagcaggagcagctcagggccctgcag
ggccgacaggaagcactaatggccatgcaggacagtgcagagcaggcactggctgtgatt
gaagacactgttgtcacagaaacgacaggcagtgtttctggcctgagcatcacatcagaa
ctgaatgacgagttgaacgatttgatccagcggttccacaaccagctgcatgattctcag
actaaagcagtgccagacaaccgtcggcaggcagagagcctgtccctctccagagaggtg
tgctggtctcgggctccccaggctgttggtcctcctcagcacaggcctctcctccactcg
gcctctggcccccacactggcctagacatgggggcaacagctgccagtgccaaactcact
aagctccaagaactccaagacaaaaagcaaaccatggacaagatcctacaggagctgcat
tcactcagagaccagacactaaacaacaactcatgtcgtggcctgtcaacacagtgcagt
ctgagtatgggagcgtcatcagactgtccatctgctctctgctctaatggggcctcagct
tccacttcctttcatccttcactcacacaacaccagaacagctccaattccacagacaag
ctcaggaagctaaaggaggtccacaaacgtttgaatgaactgcgggaactggttcagtac
tacgagcagacttctgatatgatggtggacgcggtcaatgagaatgtgaaagaggatgat
gatgaggaagaggaggaggaagatgagacagaggacagttcaatgtttgatgcccttttt
gactctgagcaggagaaccgccagcctgtgaccaacatcaggaacccacagcgcagcggg
aactggacagacttgaacagcctgaccaacaggcgcgctgtgaggggcagcgccactaac
aaccgtgatggcagactaaacacagagtgtgagatcaacaaccggtcagcagccaacctc
cgcagcctcaacatcccatcagccatagagtgccagtacaatagggacaccccctataat
cgggtgaaggatgacgatgaggatgaagatcgtctcgataatgaagaaggggcacaggct
gcggctccagacagcgaggcctcggggtcgagtcgaagaagcagtctggggaacaacggg
ggtttcgcccagaaagttcatcggcacacagcgaagcagaaactccggcagcttcaggag
ctggtggccatggttcagagtgatgacactgatggcacaacagctaatgaagatgaagct
atacaccaacagccaaataataccagagctactgtggctaggtctctgggagccgggtcc
aaacagagtcccagagaactcactctgtccagcaatgccagggagaagctgtacgaggag
aagctgcgtcagcagaagcaggagctgaagcagcttcatgaggagcgccagaggctcatt
gaaatccaaggcaagatccacgacctgcagtgggcttgccctgacctccagtcatctctg
tccagcgctgtgagtcagcagggcttactgaggaagcttccagttgcagtttccactcca
gccactgtcctgccctccccctccggacccaaaaccaactcggctgtgcttaaacccacg
gctccagaagcagcttccccttcagtcactgacaatgagcagctatggtctgagatgcgt
cgccaccagatcttgcgggaagaactgcgtcagcgcagaaagcaccttgagtccttgatg
gctgaacaccagaggcgcagtggtgtcggtgactcccccagacagatggatgactcagag
ggcctagcttcaccttcacagccagtcagtagggatgaaaggacaatggctacctggggt
tccagtccttgccaccttgatgatgatgatgatgatgatgatgatgacgatgaggatgat
gatgaggatgaatatcaatcagagatcggtgcagaggaggaagaggagcatgaagaatgt
gcagatagcagctctgatgacgacatccacatctactcatccagcaggaaccagtgctcc
tacagtaacaggaagaatcaaggaagcaacctgaagcctccagcagccttctcaggtgac
ggcagtggggatccatctcttcagaacaaggctaatgctaagcagcagcagcagcagcca
aggattatgaaccagtctgcgagcagccagcatggagctacacggcgacaagagaacctg
cgctgggcctctgagctctcctttgctgagggctcgtctcagtggcaggagcaggtcagc
cagctgcagagacagctggacttcagcaccagcatgtgtcagacgctgctgcaggaccag
cagacactctcttatatgttgcaaaccctgctgacaggtcagtacagtgtgtttcccaac
aacgtgtcatcaccacaggtccacctgatcatgcaccagctcaaccagtcttacacccag
ctggcctggcagcaaaacaacgcacaaaggctaaagcaggtcctgaacgacctcctcctc
cagcagcagcagcagcagcagcagcagcagcagcagcagcaacagcagcagcagcagcag
cagcagcagcagcagcagcaggcttcctcctcagcagcagggtggcagacccagacccag
aagcccggctcgtcccaggagtccagctccggcccctcagcctcccctggtgtattcctc
cccttctcctctaacctgcagccttctaccaacaacatgtcaactgcagccttatcccca
ttccctcccggctttaacttatatccactcttccctgctcccatgggcgagttccctcag
agtgcagcgggccagcccgcccccgaccagcggaagcagcagttagaccccaacgcctca
atcaaaacagagtacatgagtttcccccctccactgcagcgctctcctctgaacaccacc
acagagacgggagcgtctggctggcttaatacctcgtatgtgaacaacaccgtccagcac
caccagtccaacacggagcaccaggagtctccctcctcctcccccatgtttgccagccgc
catcccagacatcaagaatttgacagagcatcacaggaaagcttcagcaccatgcctgac
cctgtggatcccaccaccatcacaaagacctttaaggccggacgcaaggcctctgcacag
gccaacctggcctcaagaaccaagacccccaactccaagagccgccgcaggaggggcaaa
gggctcaagaacagtgaaggccatgagagtgacagtgtgagcagcactgcagactttgtc
caggagagggcggcgctgtcccgtcagaaggatcagaacaagagtctgttggacaggctg
acccaggagaaactcgacagcaaatctaatctggggagcaaacgaaacgacctctcctct
gcctatgcttggaggacacccttcctctctaacagaattgcatgcacagaagcaccagac
gcaagcagcgacttgcgggagaccatctactctgaagtggctacgttaatatcccagaat
gagtcccgtccacattttctcattgagctcttccatgagctgcagctgctgaacacagac
tacttacggcagagggcgctgtattccctgcaggacatagtgagcagacacctgtcggag
aggagtgcagcggaggagctcccccccctcggccctgtggtgtgggctgctggctctcag
tctgagctcacacccagtgagagtctggctaccagcgatgccgaggtggtggagaaaaac
ctgaggctcacgatgaagaaaagggatgatgcagaatctgtgggcaatgacagcaacatg
tcaacctcctccaacctcgaaccatttgctaacgatgacctgggcaacacagtgattcat
ttagacaaagctctggccaggattagggagtatgagcgcatgaagcttaaagctgagttt
aaccccttcaatggcagctctgcgggtgcaggtgaactctcacttgctgaacatccttct
gcttcccttgctgccccagtggaaggaggagcagctggtgatgtgcactgccctcagatc
gacacccagcagctggaccgtcagatcaaagccatcatgacagaagtcattcctttcctt
aaggagaacatggatgaggtgtgttccctccagctgttgacatctgtgcggcgcatggtc
ctcactctcacccaacagaatgatgaaagcaaagagtttgtccgcttcttccacagacag
ctgggaggcatactgcaggactcactcagtacatttgtggggcgtactctaaacgaatgt
ggcgaagatcttctggtggagatctccgagatcctcttcaatgaactcgccttctttagg
ctcatgcaggatttggacagcagcagcatcgccttggcaaccaaacacaagaataagaag
agggctgagccaccaatgagagcgaagaacagtctcaaggaaaatatagtagcaggtgct
gacacatcaatgtctccggcctacactgatgaagacaaggaccaagatgaggccgagcag
gaaggagcggccagcctccaggagctgtacctgcagagagagaggaagaacaccaggagc
agtgaagcgtcagagggggaggacgaagaggaggatgagcagggcggtcagggaatccgt
ctgtcaatcagtctgtccaaagcagagactcaggctctgacgaactacggcagcggggag
gatgagaacgaggaggaggaaatggaggagtttgaagccggacctgtggatgtccaaaca
tcgttgcaggcttctgctgatggacatgtggagcgggaggagacgatgctcagccaaacc
cacgagagcagagctgagcacaggagttcagagatccatgacgaaatgaacaactcagct
gctgtgactgcagagcaccgtgacatgaaggagtgtcagagcgcagaggaggaggagaga
ggaggaggaggaggaggaggaggaggaggaggaggaggaggaggagctgcctctgaagaa
ccatctgatgaagtctcccatcaccaggacccggaccccaaggagtcccacaccacgagc
agcccggactcagactctcccgtcatgatcaacgtagatgagatgggctccggtaacacg
agtcagaagtctgacgaggaagactttgtgaaggtggacgacttaccactgcagctgtct
gtcatgtgtgaggaggaactgcagaagaggatagtggaggagcagcagaataacagcctg
tcagtagagatcctcaacgggaacactgaatcgctgacggggctggtgggaaacccgcag
gccctgaaggaaccagacactctcggtgcccagagcgtgtaa
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integrated database retrieval system
