Gymnodraco acuticeps: 117556125
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Entry
117556125 CDS
T09661
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gacu04990
]
117556125
Domain-containing proteins not elsewhere classified [BR:
gacu04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
117556125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
117556125
NCBI-ProteinID:
XP_034087245
UniProt:
A0A6P8VL46
LinkDB
All DBs
Position
Unknown
AA seq
1730 aa
AA seq
DB search
MASPTAGREVPDASPQDEPEASAQPHPEPACLEAQQWIEAVTGKSFGEKDFRSGLENGIL
LCELLSEIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLRGAQLFDPGDLQDTSVRAN
LKDSDCNRKLKNVLNTLFWLGKAASGCASYSGPTLNLKEFEGLLAQMRLESDESGDGSQK
RSVRDSGYDCWDSERSDSLSPPQHTRDNSLDSLDSIGSRSQHSPSPDVVNRGNSDGRGSD
SDADAPSRRPDVRKDDMLARRTASSESRSFVPFNQFLPNRTNTSCYIPAPRRKTHTEEGD
QRSQASQEQSTRTGPQHRTPKTVTWAPEKNEEKQEEEKVTQEVLEQKKLQRLQKAGIKVL
PAAVRYSSPPTMEEQEVRSPSPSIILRCENEFLNTQKSAWDSSSDVEEEAEVRKVPDVRK
DDLASRRAHRGTVAPKVHQFVPTPACSSKDRERWEGIRRASQQTLQEKEISDKEKVPDII
TRRDNPFLNSAPHHEEEEDGEEEGEEGKVIATPNKQKDDLARRRALNKPLPHRDGPMSFV
SAPMSEKDMQRWERLKMTEPSEASPAPAVCQACLEKNYGSPFSGSAKARRGHCKVVTFGG
VTEIEQPIDTIASSEGEETELLRRLLSKATVAMPTIGLGSQLSEREHSQVDGADLNQTTP
AFTDLPPCTPETPPTPAEMDARLAQYEQRAEEDEEDEEEEERIPDLQKDDMMARRTGVFH
KQSTSTAMFNRFLPLPSTKRCTQGEVTTDAAPQNRRADRREKVNARVEQQQPRVPMETPD
RTVIRATSHREYDDEEDEYDENEPLPDLEKDDMMARRTGSFVKPSAVKTNQTKNQFLPVP
GSVKYKVAPVSAMKPLHSRPKLTEKMASESSIVTVAAEPQASLSRASTLLKCAGLRERQG
ADGRQEGHMTTPKTSVTDATEPLSTPSSSSATSLTCKVDKSSVEERVVEKVEERKTEMNE
RKKPFWLDDDDLPPIMVSRRVAFMSEDTETVSMSDILNEEEVGHLPPVSQSRNERMHEQY
NNSQEDDDPWRNDLARWKNRRRCASQDLIKKEEERKRMEKRMKEEGIDSNKRKSIKTYKE
IVEEKERREIELCEAYRNAGTPEEAAMVLQRYALRFTISDATLDSLKLPRSTSNSKQEHN
QADKENTLTPTIDDTSEPPHKPEQPVIKEQRHTEPEDMETKITQQDTSVSVSSSSGSPGS
PLSPVTISENVPPQSLKLNEPRAKPTESPTTPQKPPAAEETKPHTNHARPQIAQVQPHTT
QPTYTLPSPQPVSPRPVPLLTAKPYCQPRSTQSGHKPVKMDGLVRVNGEVTEDVPCSTPP
TSALHSPSKVKDVPSEQKEEEVPSKQTEKDAPSEKISTNHEKVEHTPSPQREKPTSCLGS
AISSLIGGRNCTTTTIIVTELTHTEPHHPDIHSNGQVNGTSGLSSPVEENKSQSATSSYS
MQDYSPTVTEGLEESSVTIETPMLNLAKRVNHWVWDPNEERKRLESWQQEQERLLQEQYQ
KEQKKLKQEWEKAQLEVQEEERKHNEEERKILEETVTPLSPTGLLNQQPVRTGTTSSATE
NNAAEGGNVPPQQNGQRREATDDQHESKLHFFQDSPCDGEPSKKQELWKTASLDRKPQLN
QSQFVKRSESHDAVTSKPQPPPTSPQPPSPTRCVSGRRLCSGCSQPLGKGAAMIIDTLGL
FFHVQCFKCAVCEGQLGDATVGTDVRIRNGLLSCHECYIASRGRGQPTTL
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggctagccccacggcaggtcgagaagtcccggatgcttcaccgcaggacgagccggag
gcgtcggctcagccccatcccgaaccagcctgtctggaggctcagcaatggatagaggct
gtaacggggaagagctttggagaaaaggacttccgcagtggactggagaacggcatcctg
ttatgcgagctgctgagtgagatcaaaccagggctggtcaagaagatcaacagactgccc
acccccatcgctggcctggacaacctgtctgtcttcctgcggggctgtgaggagttgggc
ctgaggggcgcccagctgttcgaccccggggacttgcaggacacttccgtacgagctaac
ctcaaggactctgactgcaaccgcaaactcaaaaatgtgctgaacaccctgttctggctt
gggaaggctgccagcggctgcgcctcctacagcggacctactctcaacctcaaggagttt
gaagggcttctggctcaaatgaggctggaaagtgatgaaagtggtgacggttcacagaag
cgcagtgtgagggacagcggctacgactgctgggactctgagagaagtgactctctttct
ccaccacaacacactcgtgacaactccctagacagtctggactccattggctctcgctca
cagcacagcccttctcctgatgtggtgaatcgaggcaacagtgatggacgaggcagcgac
tcggatgctgatgcccccagcaggaggccagatgtgaggaaggatgacatgttggccaga
cggacggccagcagtgaatcaagaagcttcgttccctttaaccagtttcttcccaaccga
accaacaccagctgctacatccccgctccacgccgaaaaacacatacagaggaaggagat
cagcggagtcaagcctctcaagagcagtccacaagaactggaccgcaacacagaactccc
aagactgtcacttgggcacccgagaaaaatgaggaaaaacaggaagaggaaaaagtgacg
caggaagtgttggagcagaagaagctgcagaggttgcagaaggcagggattaaagttctg
cctgctgccgttcgctacagcagccctccaacaatggaggaacaggaagtgagatctccg
tccccgagcatcatccttcgctgcgaaaatgaatttttgaacactcagaaatctgcctgg
gactcttcctctgatgtggaagaggaggccgaggtgcggaaagtcccggatgttcgtaaa
gacgatctagcatccagacgagctcatcgcggcacggttgctcccaaggtgcaccagttt
gtcccaacacctgcatgtagcagcaaagacagggagcgctgggaaggcattagacgagcc
tcgcagcaaacactgcaggagaaggagatcagtgacaaggaaaaagtccctgacatcatt
acacgccgagacaatcctttcctaaactccgcccctcaccacgaggaagaggaggacggg
gaggaagagggagaagaggggaaggtcatagcaacgcctaataagcagaaggatgacctg
gctcgtaggcgggctctgaataagcccctccctcacagggacggaccaatgagctttgtt
tctgccccaatgagtgaaaaagacatgcagaggtgggagagactcaagatgactgaaccc
agtgaggccagcccggccccagctgtgtgtcaggcttgtctggagaaaaattatggaagt
cctttcagcggatcagcaaaggctagacggggtcactgcaaagttgtgacctttgggggc
gtgacagagatcgagcagccaatagacacaatcgcatcaagtgaaggggaagagacggag
ttgctaagacgactcctttccaaggcaactgtagccatgcctactattggcctgggctcc
cagctttcagagcgggaacacagccaggtggatggagctgacctcaatcaaaccacccct
gcctttactgacctcccaccctgcacccctgagacccctcctactcctgccgagatggat
gcacgtctggctcagtatgagcaaagagcagaggaggatgaagaggatgaggaggaagaa
gagaggatcccagatcttcagaaagacgacatgatggcaaggaggacaggagttttccat
aaacaaagcacttctacagcgatgttcaaccgtttcctgcctctgcccagtaccaagcgc
tgcactcaaggcgaggtcaccactgacgcggctccgcagaacagaagggcagacaggaga
gagaaagtaaacgccagagtggagcaacagcaacccagagttcccatggaaacacctgac
aggactgtaatccgagcaacgtctcacagagaatatgatgatgaagaggatgagtatgat
gaaaacgagcctttgcctgacctggagaaggacgatatgatggctcgaaggaccggatca
ttcgtaaaacccagtgcagtcaaaacaaatcagaccaaaaaccagttcctgccggtacct
ggatcagtgaaatataaagtcgcccctgtgtctgcaatgaagcctctgcacagcagacct
aaactcactgagaagatggccagtgaaagcagcatcgttaccgtggcagcagaacctcag
gcttcgctctccagagcctcgaccctccttaagtgtgccggtctgagggagaggcagggg
gcggatggaaggcaagagggacacatgacgacccctaaaacctctgtgacagatgctaca
gagcccctctctactccgtcgtccagttctgccacttccctaacttgtaaagtggataag
tcaagtgtagaggagagagtggtggaaaaggtggaggagagaaagacagaaatgaacgaa
agaaagaaaccattctggctggacgacgatgatctgcctcccatcatggtgagccggcga
gttgcttttatgtctgaggacactgagaccgtgagcatgagtgacatacttaacgaggaa
gaggtgggacacttaccgccggtgagccaatcacgaaacgagcgcatgcacgagcagtac
aacaactctcaggaggacgacgacccctggagaaacgacttggctcgctggaagaatcgg
cgtcgctgtgcgtcacaggatctgatcaagaaggaagaagagaggaagaggatggagaaa
aggatgaaggaggagggaattgacagtaacaagaggaaaagcattaaaacctacaaagag
atcgtagaggagaaggagcgcagagagatagagttgtgtgaagcctacaggaatgcaggg
actccagaagaggctgccatggttttacagcgctacgctcttcgcttcaccatcagtgac
gcaacactggacagcttaaaactgcccagatccacctcaaattctaaacaggaacataat
caggcggacaaggagaacacattgactcccactattgatgacacatcagaaccgccgcac
aaaccagaacaacctgtgataaaagagcagaggcacacagagcctgaagacatggagaca
aaaataactcaacaagacacgtcagtttcggtctcctccagctccgggtcacctggcagc
cccctcagccccgtcacaatctcagaaaatgtcccccctcagtcccttaaactaaatgag
cctcgagccaaaccgacagagtctccaaccactccgcaaaaaccaccagctgcagaagaa
acaaagcctcataccaatcacgctcggcctcagattgctcaggtgcagcctcacaccaca
cagcccacatacacactcccctccccccaacctgtctccccccgacccgtccccctgctg
acagccaaaccctactgccagcccaggagcacacagtccggacacaaacccgtcaagatg
gacgggttggtgcgagtaaatggagaggtgactgaagatgtaccgtgttccactccacct
acctctgctctgcactcgccatcaaaggtcaaagatgttccctcagagcagaaggaggaa
gaagttccctccaaacagacggagaaagacgctccctcagagaagatttccactaatcac
gagaaggtggagcacacgccttctccgcagagagaaaagccaacatcgtgtttaggctct
gccatcagctccctgattggaggcagaaactgtaccaccaccaccattattgtgaccgag
ctcacacatacggagccacatcacccagacatccacagcaatggacaggtcaacggtact
tctgggttatccagtccagtggaggagaacaagtctcagtcggctacatcatcctacagc
atgcaggattattctcccactgtcacagaggggcttgaggagagcagtgtgactattgag
acccccatgttgaacttggctaaacgtgttaatcactgggtctgggaccccaatgaggaa
cgtaaacgcctggaaagttggcaacaggagcaggagcgcctccttcaggagcaataccag
aaagaacagaagaagctgaagcaggagtgggagaaagctcagctggaggtgcaggaggag
gagagaaaacacaacgaagaggagagaaagatcctagaggagacggtgacacctttaagt
cccaccggcttgttaaaccagcagccggtccggacagggacgacttcatcagcgacagaa
aacaacgcggcagaaggaggaaacgttcctccacagcaaaacggccaaagaagggaagcg
accgacgaccagcatgaatccaagctgcattttttccaggattctccatgtgatggcgag
ccttcaaagaaacaggaactgtggaagacggcctctctggaccgcaaacctcagctaaac
cagtcacagtttgttaaaaggtctgaatcacatgatgctgtaacaagcaaaccgcagcct
ccccccacatcacctcagcccccctcacccaccaggtgtgtgagtgggaggagactctgt
tctggttgttctcaaccgctgggcaaaggagccgccatgatcatcgatacactcgggctg
tttttccatgtacagtgttttaagtgtgcagtgtgtgaaggccagctgggtgacgccact
gtaggaactgatgtccgtattcgtaacggactgctgagctgtcatgagtgctatatcgca
tctcgaggcagaggtcagcccaccacactatga
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integrated database retrieval system
