Gymnodraco acuticeps: 117556319
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Entry
117556319 CDS
T09661
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03440
Homologous recombination
gacu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117556319 (brip1)
03460 Fanconi anemia pathway
117556319 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gacu03400
]
117556319 (brip1)
Enzymes [BR:
gacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117556319 (brip1)
DNA repair and recombination proteins [BR:
gacu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
117556319 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
117556319 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
HBB
CedA
Motif
Other DBs
NCBI-GeneID:
117556319
NCBI-ProteinID:
XP_034087518
UniProt:
A0A6P8VQS6
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MAPPSVQYTIGGVKITFPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCST
LGWQQAQYAKSQEEGSLAKDKSQPEKNCGDCKKSDIPSPCRCVCHSNACRSTAVTPPKAD
VVDLTLSPCKDKVELQTPAPEHVPLPEESQPSKKSLASRLSEKFQSFLGSDQQKDDDFQP
DRKRLRTAEHTSRKKQRLEQGVVFIDDDELEHGDEHSGPPSWTVKPSSQSAALSSCCVST
HSPEPCILCPCASTKEAVKDKAKDGKKKVPKIFFGTRTHKQITQIAHELKRTVYSGVPMT
ILSSRNQTCVHPEVAPHSNRNERCRDLLKAKDGKSCRYYHGVQRMRDQCSLQRVHGLSEA
WDIEDIVALGKRLRSCPYYAARELMQEASIVFCPYNYLLDPMIRESMEIDLTGQIVILDE
AHNIEDCARESSSFNLDHSSLLACRDELDGMVNINIRRSQHEPLRNFCYSLINWIQESQG
LMSERGYETSSKVWNGKDVLSIFHNLGITADTFGLLKKNLAAVLEKEERVGVVNGKEDMV
QLPTISSASSIVLKNLFMVLGFMFSSEDNCSFAEDYRVALQKSYAWTNQVPPDVPDAHGF
FVRPRQRQRLSARVKAEVLTLSFWCLNPAVAFSDLRKSVHSIVLTSGTLSPMGSFSSELG
VKFTIQLEANHVINKSQVWVGTIGSGPQGRKLLATFQHTETYAFQDEVGALLLNVCQVVA
KGVLCFLPSYKMLDKLRDRWINTGLWEKLEQCKAVITEPRGSGKGDFDELLQTYYDAIKY
CVERDGALLIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSR
GLLPGSRWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRNNPNKYITGLSKWVRQLV
QHHDNFGNAMQSLVAFSEVQQKASVALAASQSLSSTASSPKSLLSVTLEDESPPKATEHQ
TPSSCVKPPVPKLDTSPTSVHFFSRTQLKAEQQEKAELLNTMHSTPAEPLHQKRNTGSPL
YNIFSPASTCFRKPIFKEKAVCNSSQLFETSTDSEHKEKQPISSPQKPTCLKQESGDGSG
GIKLEAHNQPLEPSPPSTCKSELPSVDSTDEKEEDQTVFFTPELFEGEGSPQEEANGKSP
PRMAGVAESPAPLSEELFGSEQARGQGRASAFDRQSSISVSMDSTELSQGQEGDIIGQNQ
GEEAEQVDTQSRQTGSKLRRLSRSKQKAPPTTTGN
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggctccaccctcggtgcagtataccattggaggagtgaagatcaccttcccctgcaag
gcgtacccatcccagctggctatgatgaattcaatcatacgagggctgaataatgggcag
cactgcttgctggaaagtccgacaggaagtggaaagagtttggctttgctgtgctccacc
cttggctggcagcaggctcagtatgctaaatctcaagaagagggcagcctggcgaaagac
aagagccagccagagaaaaactgtggagactgtaagaagtcagatattcccagtccctgt
cggtgtgtgtgccacagcaacgcctgcaggagcacagctgtaacgccacctaaagctgat
gtggtggacctcaccttgtcaccctgcaaagacaaggtagagctgcagactccagcacct
gaacatgttccattgccagaggagtcgcagcccagtaaaaagtctctagcctctcgactg
tctgagaagttccagtctttcctcggctcggaccagcagaaggacgacgacttccagcca
gacaggaaacgccttcgcactgccgaacacacgagccgtaaaaagcagcgtctggagcag
ggagtggtgttcatagatgacgacgagctggagcatggagacgagcattcaggccctccc
agctggactgtgaagccaagcagccaatcagctgctctgtcctcatgctgcgtgagtacg
cattcccctgaaccctgcatcctgtgcccgtgtgcgtcaaccaaagaagctgtgaaggac
aaagccaaagatggcaaaaagaaggttcctaagatcttctttgggactcgcactcataag
cagataactcagatcgcccatgagctgaagcgcacggtttactccggcgtgcccatgacc
atcttatccagcagaaatcagacatgtgtccatccagaagtggcgcctcactccaaccgg
aatgaacgctgcagggatctactgaaggctaaagatggtaaatcatgccgctactaccac
ggtgtccaaaggatgcgggatcagtgctcactgcagcgggtccacggactctctgaagcc
tgggacattgaggacatagtggcactgggtaaacgccttcgctcatgcccctactacgct
gcacgagaactcatgcaggaggcctccattgtcttctgtccatataactacctgctggac
ccaatgatcagagagagtatggagattgacctgactggtcagattgtgattctggacgag
gcccacaacatcgaggactgtgcaagggagagttccagctttaatctcgaccacagcagt
ctgctggcatgtagggacgagcttgacggcatggtcaacatcaacatcagacgatcccag
cacgagccactcaggaacttctgttatagcttgatcaactggatccaggagagccaaggc
ttgatgtctgaacgaggatatgagacttccagtaaagtctggaatgggaaggatgtactg
agcatctttcacaaccttggcatcactgctgacaccttcggccttctgaagaaaaacctg
gcagcagttttagagaaggaggagcgtgttggtgtggtcaatggaaaagaggatatggtt
cagctcccaacaatcagctcagcatcctccattgtcctcaaaaacctcttcatggtgctg
ggcttcatgttctcttctgaggacaactgcagctttgctgaagactaccgggtagctctg
cagaagagctatgcttggacgaaccaggtcccacctgatgtccctgatgcccatggcttt
tttgttcggcctcgccaaagacaacgcctgagtgccagagtcaaggcagaagtcctaaca
ctcagcttctggtgcctcaaccctgctgtggctttctctgacttgagaaagtctgtgcac
agcattgtgctgacatcaggaaccctgtcaccaatgggctcgttctcctctgaacttgga
gtgaagttcaccatccagctggaggccaaccatgttatcaacaagtcccaggtttgggtg
ggcactattggttcaggaccccaaggcagaaagctcctcgccaccttccaacacactgaa
acgtacgccttccaggacgaggtgggggcgctgctgctcaatgtgtgccaggtcgtggcc
aagggtgtactctgctttctgccatcttacaagatgctcgacaagctgcgagaccgatgg
atcaacacaggtctttgggagaagctcgaacagtgtaaagctgtgatcacagagccccgc
ggcagtggcaagggggattttgatgaactgctgcagacgtactacgatgccatcaagtac
tgcgtggaaagagatggtgcactactaatcgcagtctgtagaggtaaagtgagtgaagga
ctagacttcactgatgacaatgccagggctgtggtcaccattggaattcccttcccaaac
atcaaagatctccaagtggaattgaagatgaagtacaatgaccaacactgcaaatcaaga
ggtcttctcccaggctctcgctggtacgagattcaggcctacagagctttgaaccaggcc
ctgggaaggtgtatccgccacaagaatgactggggtgccttaattctagtggatgaccgt
ttccggaataatcccaataagtacatcacaggtctgtctaaatgggttcgccagcttgtc
cagcatcacgacaacttcggcaatgccatgcagtctctggtagcgttctctgaggttcaa
cagaaagcgtcggtggctctggcagccagtcagagtctcagctctactgcctcatctcca
aaaagtctcttgtcagtaactcttgaggacgagagtccaccaaaagccacagaacatcag
acaccaagctcttgtgtcaaaccacctgtacccaagcttgacacaagcccaacaagcgtc
catttcttttcacgtacacagttaaaagctgaacaacaagaaaaagcagaactgttgaat
acgatgcacagtaccccagcggagcccttacatcaaaaaagaaacacaggttcgcctctg
tacaacattttcagccccgccagcacctgcttcaggaagccaatcttcaaagaaaaagca
gtatgtaattccagccagctctttgaaacatctacggattcagagcacaaggagaagcag
ccgatctcgtctccacaaaagccaacttgtcttaagcaagagagtggagatggttccggt
ggaatcaaattggaagcacacaatcagcctttggagccttctccaccatctacctgtaaa
agtgaactgccctcagtagacagtacagatgaaaaggaagaggaccaaactgtgttcttc
actccagaacttttcgagggtgaaggcagcccacaggaagaggccaacggcaagtcacct
cccaggatggctggagtggcggagagtcctgcccccctgtcagaagaactttttggctct
gagcaagcccgagggcaaggtcgagcctctgcttttgatagacagagttctatttcagtc
agtatggacagcacagagctgtcacagggacaggaaggagacattataggacagaaccaa
ggtgaagaagcagagcaggtggacacccagagcaggcagacaggaagtaagcttcgcagg
ttgtccaggtccaagcagaaagctccccccactacaacaggtaactag
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integrated database retrieval system
