Gymnodraco acuticeps: 117556372
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Entry
117556372 CDS
T09661
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117556372 (prdm1c)
Transcription factors [BR:
gacu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117556372 (prdm1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
Zf-C2H2_ZNF451
zf-met
zf-C2HE
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
117556372
NCBI-ProteinID:
XP_034087568
UniProt:
A0A6P8VR42
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MCGSSQGFTASSSQCTTAMLTSENSPQSTGVIATAMPETQDADMALWNEANFEEKCTYIV
KDHLLEEGSENKTRAERSLPRNLALKSCHNSTEVLGVTSKELIPQGTRFGPLVGESYTNE
TLPKDPDRKYFWRVFSEGHLHHILDGLNEERSNWMRYVNPACSVQEQNLVACQSGLNIYF
YTIKPLQPGKELLVWYCPEFARRCNYPPLGRLAIDSIESSQAQEKTTVKRGHSVSEILRD
EPSKSLSACPRRLSSPVSQTNLSAVFPLCPRVVYPIKPHSESIHGQRYVSQPPVPSCSPP
AAKRLVISGPSSLHFTLQHGQSPVTAKPYQKPSVPDRVHPALRHSPYLLPHYSLGLNSIL
PQSFPFYRDQIKHHFPSHLLPFDSYAHIHPSLANRHKDLTLALSNTKQDLIISQNSEHRD
NKDLITERTNYLRCPSNDLRDFRQSPSSNIHADLSLPASSSASSMATSLRRALPSLAPGG
CSPPVGMAAFSDCFPSKPTSATQRQTEDAMDLRKINRGGHIIGYKTLSYPLTRQNGKIRY
DCNICGKIFGQLSNLKVHLRVHSGERPFRCQTCNKNFTQLAHLQKHYLVHTGEKPHECKV
CHKRFSSTSNLKTHQRLHSGERPYLCKLCPARFTQYIHLKLHKRLHTGERPHRCPCCPCA
YLHYCSLQVHLQGFCPLSPSASHRHSPEELHRVNAEIERFDVSEAAEQLEAMAADAEMDK
GNVFDLIKKMESRTSGHHEEEEAELSMYKSAVLPHHGSPLPLHPTSIKLETGCTSEP
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggcttcacagcctcctcctctcagtgcaccacagccatgtta
acatcagaaaactcaccgcagagcacaggggtcatcgcaacagcaatgccagagacgcag
gacgcagacatggcattatggaacgaggcaaactttgaggagaagtgcacatatatcgtg
aaggaccatcttctggaggaagggtccgaaaacaagacacgagccgagagatctttaccg
agaaacctggccctgaagagctgccacaactccacagaggtgcttggggttaccagtaag
gagctgattcctcagggaacacgttttggccctctggtgggggaaagctacaccaacgaa
acgctaccgaaagatcccgacaggaagtacttctggagggtcttctcggaggggcattta
caccacatcctggatggtttgaacgaggagcggagcaattggatgcgttacgtcaaccca
gcctgttctgtgcaggagcagaacctggtggcctgccagagcgggttaaacatctacttc
tacaccatcaaacccctgcagccgggcaaggagctcctggtgtggtactgtcctgaattc
gcccggcgctgtaactaccctccactgggtcgactggctattgacagtattgaatcaagt
caagctcaggagaagacaacagtgaaacgaggacacagtgtctctgaaatccttcgagac
gagccttccaagtccctgtctgcctgccccagacgtctgagtagccccgtgtctcagacc
aacctctcagcagtttttcccctgtgtccccgtgttgtatacccgatcaagccccactca
gaatccatccatggccaaagatatgtgagtcaaccacctgtgccatcctgtagccctcca
gctgcaaaaagactggttattagcggtccctctagtttgcacttcacccttcagcacggt
caaagtcctgttacagccaaaccttaccaaaagccctctgtacctgatcgagtccatcct
gctctgaggcattccccctatctactgcctcactactcactcggccttaacagcattcta
cctcagtcattccccttctacagagaccaaataaaacatcacttcccatctcatttgctg
ccttttgacagctatgcacacatccacccttctctggctaacagacacaaagacttgaca
cttgcactatccaacaccaaacaagacctcattatttcacaaaacagcgagcacagagac
aacaaggacctcataaccgaaaggacaaactacctcaggtgcccttcaaatgacctcaga
gatttcagacaatctccaagcagtaatattcacgcagacctcagtttacctgcatcatcc
agtgcctcatccatggccacctccctccgcagagcactgccatctcttgcgcctggagga
tgttcaccaccagtgggtatggctgccttttcagactgcttcccttccaaacccacctct
gccactcagagacaaactgaggatgcaatggacctcaggaagatcaaccgaggaggacat
attatcggctacaagacgctgtcatatcccctcacaaggcagaatggaaagatccggtat
gattgcaacatctgtggaaaaatctttgggcagctgtccaaccttaaggtccatctgcga
gtgcacagcggggagcgtcccttcaggtgtcagacctgcaataagaacttcacacagctg
gcccacctgcagaaacactacctggttcacactggagagaagcctcatgaatgcaaggtg
tgccataagcgattcagtagcacaagcaacttaaagacccatcagcggctacactcaggt
gagaggccgtacctgtgcaagctctgcccggcccgctttactcaatacatacacctaaag
ctccacaaacggctccacactggtgaacgacctcacaggtgtccttgttgcccctgtgcc
tatctccactactgcagcctccaggtgcacctccaaggcttctgccctctctccccctcg
gcctcccacagacactccccggaggagctacaccgagtcaacgcggagattgagaggttc
gacgtgagcgaagcggcagagcagcttgaggccatggctgcagatgccgagatggacaag
ggaaatgtttttgacttgataaagaagatggagtctcgtacctctggccaccacgaagag
gaggaggccgagctgagcatgtacaaatctgcagttctgccacatcatggcagccctcta
cctctgcatccaaccagtatcaagctggagacaggctgcacatcagagccctaa
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